Protein–RNA interactions for Protein: O55240

Rdh5, 11-cis retinol dehydrogenase, mousemouse

Predictions only

Length 318 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rdh5O55240 AC121978.1-201ENSMUST00000228357 380 ntBASIC4.91□□□□□ -1.62
Rdh5O55240 C130073F10Rik-201ENSMUST00000051043 913 ntAPPRIS P1 TSL 1 (best) BASIC4.91□□□□□ -1.62
Rdh5O55240 Ube2d4-201ENSMUST00000075109 406 ntTSL 5 BASIC4.91□□□□□ -1.62
Rdh5O55240 Olfr552-201ENSMUST00000098223 954 ntAPPRIS P1 BASIC4.91□□□□□ -1.62
Rdh5O55240 Hist1h2bb-201ENSMUST00000099703 508 ntAPPRIS P1 BASIC4.91□□□□□ -1.62
Rdh5O55240 Casp1-201ENSMUST00000027015 1497 ntAPPRIS P1 TSL 1 (best) BASIC4.91□□□□□ -1.62
Rdh5O55240 Cfap97-201ENSMUST00000034048 4619 ntAPPRIS P2 TSL 1 (best) BASIC4.91□□□□□ -1.62
Rdh5O55240 AC153144.1-201ENSMUST00000221759 3139 ntBASIC4.91□□□□□ -1.62
Rdh5O55240 Gm5890-201ENSMUST00000190145 1336 ntAPPRIS P1 TSL 1 (best) BASIC4.91□□□□□ -1.62
Rdh5O55240 Impg1-201ENSMUST00000085289 3356 ntAPPRIS ALT2 TSL 5 BASIC4.91□□□□□ -1.62
Rdh5O55240 Ogt-202ENSMUST00000119299 3840 ntAPPRIS ALT1 TSL 5 BASIC4.91□□□□□ -1.62
Rdh5O55240 9830107B12Rik-201ENSMUST00000063481 3639 ntAPPRIS P1 TSL 1 (best) BASIC4.91□□□□□ -1.62
Rdh5O55240 Vmn1r171-210ENSMUST00000228484 2421 ntAPPRIS ALT2 BASIC4.91□□□□□ -1.62
Rdh5O55240 Slco1a1-202ENSMUST00000168119 3904 ntAPPRIS ALT2 TSL 1 (best) BASIC4.91□□□□□ -1.62
Rdh5O55240 Gria4-204ENSMUST00000212533 5207 ntAPPRIS ALT1 TSL 1 (best) BASIC4.9□□□□□ -1.62
Rdh5O55240 Dnase2b-202ENSMUST00000200633 2685 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.62
Rdh5O55240 Nop58-215ENSMUST00000191142 9507 ntAPPRIS P2 TSL 1 (best) BASIC4.9□□□□□ -1.62
Rdh5O55240 Far2-202ENSMUST00000111607 3395 ntTSL 1 (best) BASIC4.9□□□□□ -1.62
Rdh5O55240 Gm37456-201ENSMUST00000193176 5837 ntBASIC4.9□□□□□ -1.62
Rdh5O55240 Gm45177-201ENSMUST00000209104 2307 ntBASIC4.9□□□□□ -1.62
Rdh5O55240 Ncr1-202ENSMUST00000126417 1495 ntAPPRIS ALT2 TSL 1 (best) BASIC4.9□□□□□ -1.62
Rdh5O55240 Nlrp9b-201ENSMUST00000073151 3346 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.62
Rdh5O55240 Vmn1r27-203ENSMUST00000228530 3115 ntAPPRIS P2 BASIC4.9□□□□□ -1.63
Rdh5O55240 Gm12808-201ENSMUST00000120597 404 ntBASIC4.9□□□□□ -1.63
Rdh5O55240 Gm17014-201ENSMUST00000120765 168 ntBASIC4.9□□□□□ -1.63
Rdh5O55240 Gm11805-201ENSMUST00000121238 600 ntBASIC4.9□□□□□ -1.63
Rdh5O55240 Gm15838-201ENSMUST00000161575 180 ntBASIC4.9□□□□□ -1.63
Rdh5O55240 Gm10269-201ENSMUST00000165229 372 ntAPPRIS P1 BASIC4.9□□□□□ -1.63
Rdh5O55240 Vmn1r57-201ENSMUST00000170780 933 ntAPPRIS P1 BASIC4.9□□□□□ -1.63
Rdh5O55240 Mir3090-201ENSMUST00000175597 87 ntBASIC4.9□□□□□ -1.63
Rdh5O55240 Gm10784-201ENSMUST00000178715 238 ntBASIC4.9□□□□□ -1.63
Rdh5O55240 Gm8604-201ENSMUST00000183150 965 ntBASIC4.9□□□□□ -1.63
Rdh5O55240 1700015G11Rik-202ENSMUST00000185758 366 ntAPPRIS ALT2 TSL 3 BASIC4.9□□□□□ -1.63
Rdh5O55240 Gm28873-201ENSMUST00000186130 667 ntTSL 2 BASIC4.9□□□□□ -1.63
Rdh5O55240 Gm37882-201ENSMUST00000195254 196 ntBASIC4.9□□□□□ -1.63
Rdh5O55240 Gm42542-201ENSMUST00000197978 268 ntBASIC4.9□□□□□ -1.63
Rdh5O55240 Gm4321-201ENSMUST00000200520 442 ntBASIC4.9□□□□□ -1.63
Rdh5O55240 Spata19-202ENSMUST00000214158 627 ntTSL 5 BASIC4.9□□□□□ -1.63
Rdh5O55240 4933411E02Rik-201ENSMUST00000216779 1030 ntTSL 1 (best) BASIC4.9□□□□□ -1.63
Rdh5O55240 Gm19256-201ENSMUST00000218550 231 ntBASIC4.9□□□□□ -1.63
Rdh5O55240 Gm40392-201ENSMUST00000220656 562 ntTSL 5 BASIC4.9□□□□□ -1.63
Rdh5O55240 AC121599.1-201ENSMUST00000224276 449 ntBASIC4.9□□□□□ -1.63
Rdh5O55240 AC165953.1-201ENSMUST00000226386 357 ntBASIC4.9□□□□□ -1.63
Rdh5O55240 AL607142.1-201ENSMUST00000226560 78 ntAPPRIS P1 BASIC4.9□□□□□ -1.63
Rdh5O55240 Vmn1r39-202ENSMUST00000226783 918 ntAPPRIS P2 BASIC4.9□□□□□ -1.63
Rdh5O55240 Cox6b2-201ENSMUST00000063324 553 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.63
Rdh5O55240 Tas2r120-201ENSMUST00000071707 892 ntAPPRIS P1 BASIC4.9□□□□□ -1.63
Rdh5O55240 Gmfg-201ENSMUST00000078845 637 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.63
Rdh5O55240 Mir20a-201ENSMUST00000083508 107 ntBASIC4.9□□□□□ -1.63
Rdh5O55240 Gm7676-201ENSMUST00000084055 319 ntBASIC4.9□□□□□ -1.63
Rdh5O55240 Slc10a2-201ENSMUST00000023835 4152 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.63
Rdh5O55240 Epha7-203ENSMUST00000108191 6615 ntAPPRIS ALT1 TSL 1 (best) BASIC4.9□□□□□ -1.63
Rdh5O55240 Obox5-201ENSMUST00000098802 1831 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.63
Rdh5O55240 Npat-201ENSMUST00000035850 6062 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.63
Rdh5O55240 Gm1527-201ENSMUST00000099170 2120 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.63
Rdh5O55240 Olfr1261-204ENSMUST00000216953 3176 ntAPPRIS P1 TSL 5 BASIC4.9□□□□□ -1.63
Rdh5O55240 Elmod1-202ENSMUST00000166580 2243 ntAPPRIS ALT1 TSL 5 BASIC4.89□□□□□ -1.63
Rdh5O55240 Cylc1-202ENSMUST00000210720 1969 ntAPPRIS ALT2 TSL 5 BASIC4.89□□□□□ -1.63
Rdh5O55240 Ccar1-201ENSMUST00000020268 4352 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
Rdh5O55240 Gm13928-201ENSMUST00000120326 1732 ntBASIC4.89□□□□□ -1.63
Rdh5O55240 Gm7416-201ENSMUST00000117448 1487 ntBASIC4.89□□□□□ -1.63
Rdh5O55240 Slc28a2-203ENSMUST00000110525 3911 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
Rdh5O55240 Ccr9-204ENSMUST00000168910 2888 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
Rdh5O55240 Olfr893-202ENSMUST00000211975 2924 ntAPPRIS ALT2 TSL 5 BASIC4.89□□□□□ -1.63
Rdh5O55240 Gramd1c-201ENSMUST00000036174 3501 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
Rdh5O55240 Gm24429-201ENSMUST00000104076 132 ntBASIC4.89□□□□□ -1.63
Rdh5O55240 4930402H24Rik-203ENSMUST00000119422 3815 ntAPPRIS ALT2 TSL 1 (best) BASIC4.89□□□□□ -1.63
Rdh5O55240 Gm12422-201ENSMUST00000121431 302 ntBASIC4.89□□□□□ -1.63
Rdh5O55240 n-R5s21-201ENSMUST00000122692 117 ntBASIC4.89□□□□□ -1.63
Rdh5O55240 Gtsf1-202ENSMUST00000123724 747 ntTSL 5 BASIC4.89□□□□□ -1.63
Rdh5O55240 Gtsf1-204ENSMUST00000136480 767 ntAPPRIS P1 TSL 2 BASIC4.89□□□□□ -1.63
Rdh5O55240 Gm10319-202ENSMUST00000159439 846 ntBASIC4.89□□□□□ -1.63
Rdh5O55240 Gm8358-201ENSMUST00000167222 555 ntBASIC4.89□□□□□ -1.63
Rdh5O55240 Gm20545-201ENSMUST00000174739 210 ntBASIC4.89□□□□□ -1.63
Rdh5O55240 Gm26318-201ENSMUST00000176507 96 ntBASIC4.89□□□□□ -1.63
Rdh5O55240 Gm4791-201ENSMUST00000178065 1021 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
Rdh5O55240 Fam240b-201ENSMUST00000180282 1097 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
Rdh5O55240 Gm28353-201ENSMUST00000186482 570 ntBASIC4.89□□□□□ -1.63
Rdh5O55240 Gm28533-201ENSMUST00000186741 570 ntBASIC4.89□□□□□ -1.63
Rdh5O55240 Gm7496-201ENSMUST00000192573 1034 ntBASIC4.89□□□□□ -1.63
Rdh5O55240 Gm37700-201ENSMUST00000192617 965 ntBASIC4.89□□□□□ -1.63
Rdh5O55240 4930434O05Rik-201ENSMUST00000203259 387 ntBASIC4.89□□□□□ -1.63
Rdh5O55240 Gm44048-201ENSMUST00000204531 361 ntBASIC4.89□□□□□ -1.63
Rdh5O55240 Gm18468-201ENSMUST00000207321 369 ntBASIC4.89□□□□□ -1.63
Rdh5O55240 Gm18470-201ENSMUST00000207467 420 ntBASIC4.89□□□□□ -1.63
Rdh5O55240 Gm18465-201ENSMUST00000207468 369 ntBASIC4.89□□□□□ -1.63
Rdh5O55240 Gm18464-201ENSMUST00000207803 420 ntBASIC4.89□□□□□ -1.63
Rdh5O55240 Gm18458-201ENSMUST00000207908 369 ntBASIC4.89□□□□□ -1.63
Rdh5O55240 Gm18461-201ENSMUST00000208421 420 ntBASIC4.89□□□□□ -1.63
Rdh5O55240 Gm2645-201ENSMUST00000223516 547 ntBASIC4.89□□□□□ -1.63
Rdh5O55240 Olfr1257-201ENSMUST00000060795 1016 ntAPPRIS P1 BASIC4.89□□□□□ -1.63
Rdh5O55240 Cyp2c38-201ENSMUST00000035488 2869 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
Rdh5O55240 Olfr586-203ENSMUST00000213281 5001 ntAPPRIS ALT2 TSL 5 BASIC4.89□□□□□ -1.63
Rdh5O55240 Nlrp4g-201ENSMUST00000067621 2030 ntBASIC4.89□□□□□ -1.63
Rdh5O55240 Tcp1-ps1-201ENSMUST00000120941 1466 ntBASIC4.88□□□□□ -1.63
Rdh5O55240 Vmn1r175-202ENSMUST00000228383 2878 ntAPPRIS P1 BASIC4.88□□□□□ -1.63
Rdh5O55240 Slamf7-203ENSMUST00000192195 3975 ntAPPRIS P3 TSL 1 (best) BASIC4.88□□□□□ -1.63
Rdh5O55240 CT030159.1-201ENSMUST00000221580 2261 ntBASIC4.88□□□□□ -1.63
Rdh5O55240 Il1a-201ENSMUST00000028882 1974 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
Rdh5O55240 Tmem72-201ENSMUST00000056623 17152 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
Retrieved 100 of 76,532 protein–RNA pairs in 71.8 ms