Protein–RNA interactions for Protein: F8VQB8

Npcd, Neuronal pentraxin chromo domain, mousemouse

Predictions only

Length 469 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NpcdF8VQB8 Gimd1-202ENSMUST00000196701 654 ntAPPRIS P1 TSL 3 BASIC7.45□□□□□ -1.22
NpcdF8VQB8 Gm43554-201ENSMUST00000199987 186 ntBASIC7.45□□□□□ -1.22
NpcdF8VQB8 1700065J11Rik-201ENSMUST00000201560 424 ntTSL 1 (best) BASIC7.45□□□□□ -1.22
NpcdF8VQB8 Gm45474-201ENSMUST00000209471 408 ntBASIC7.45□□□□□ -1.22
NpcdF8VQB8 Gm20751-201ENSMUST00000210260 1270 ntTSL 1 (best) BASIC7.45□□□□□ -1.22
NpcdF8VQB8 Gm18781-201ENSMUST00000211252 924 ntBASIC7.45□□□□□ -1.22
NpcdF8VQB8 Gm18252-203ENSMUST00000215855 757 ntBASIC7.45□□□□□ -1.22
NpcdF8VQB8 AC154657.1-201ENSMUST00000226394 775 ntBASIC7.45□□□□□ -1.22
NpcdF8VQB8 Smr3a-201ENSMUST00000031211 635 ntAPPRIS P2 TSL 1 (best) BASIC7.45□□□□□ -1.22
NpcdF8VQB8 S100a9-201ENSMUST00000069960 512 ntAPPRIS P1 TSL 1 (best) BASIC7.45□□□□□ -1.22
NpcdF8VQB8 Olfr799-201ENSMUST00000071126 936 ntAPPRIS P1 BASIC7.45□□□□□ -1.22
NpcdF8VQB8 Olfr724-201ENSMUST00000075030 1006 ntAPPRIS P1 BASIC7.45□□□□□ -1.22
NpcdF8VQB8 Hapln1-201ENSMUST00000022108 5715 ntAPPRIS P1 TSL 1 (best) BASIC7.45□□□□□ -1.22
NpcdF8VQB8 Skil-201ENSMUST00000029194 6717 ntAPPRIS P3 TSL 5 BASIC7.45□□□□□ -1.22
NpcdF8VQB8 Platr25-201ENSMUST00000143260 2509 ntTSL 1 (best) BASIC7.45□□□□□ -1.22
NpcdF8VQB8 Zranb3-203ENSMUST00000112538 4741 ntAPPRIS P1 TSL 1 (best) BASIC7.45□□□□□ -1.22
NpcdF8VQB8 Adar-201ENSMUST00000029563 3753 ntAPPRIS P4 TSL 1 (best) BASIC7.45□□□□□ -1.22
NpcdF8VQB8 Gm42989-201ENSMUST00000200646 2306 ntBASIC7.45□□□□□ -1.22
NpcdF8VQB8 Olfr1226-205ENSMUST00000216445 7046 ntAPPRIS P1 TSL 5 BASIC7.45□□□□□ -1.22
NpcdF8VQB8 Zgrf1-201ENSMUST00000043108 7046 ntAPPRIS P1 TSL 5 BASIC7.45□□□□□ -1.22
NpcdF8VQB8 C430042M11Rik-201ENSMUST00000180515 1617 ntTSL 1 (best) BASIC7.45□□□□□ -1.22
NpcdF8VQB8 Wdr66-207ENSMUST00000170536 3679 ntTSL 5 BASIC7.45□□□□□ -1.22
NpcdF8VQB8 Nsd2-205ENSMUST00000114399 7786 ntTSL 5 BASIC7.45□□□□□ -1.22
NpcdF8VQB8 Gm37685-201ENSMUST00000193507 2177 ntBASIC7.44□□□□□ -1.22
NpcdF8VQB8 9930038B18Rik-201ENSMUST00000151816 3966 ntTSL 5 BASIC7.44□□□□□ -1.22
NpcdF8VQB8 Trp63-208ENSMUST00000115310 5366 ntAPPRIS ALT1 TSL 1 (best) BASIC7.44□□□□□ -1.22
NpcdF8VQB8 Depdc1a-202ENSMUST00000106041 1971 ntAPPRIS P1 TSL 1 (best) BASIC7.44□□□□□ -1.22
NpcdF8VQB8 Gm37010-201ENSMUST00000194539 1704 ntBASIC7.44□□□□□ -1.22
NpcdF8VQB8 AC154406.1-201ENSMUST00000215220 2529 ntBASIC7.44□□□□□ -1.22
NpcdF8VQB8 Grik2-202ENSMUST00000105484 3992 ntAPPRIS P1 TSL 1 (best) BASIC7.44□□□□□ -1.22
NpcdF8VQB8 AF366264-201ENSMUST00000071308 3157 ntAPPRIS P1 BASIC7.44□□□□□ -1.22
NpcdF8VQB8 Gm5886-203ENSMUST00000203983 2613 ntTSL 1 (best) BASIC7.44□□□□□ -1.22
NpcdF8VQB8 Lrrc69-202ENSMUST00000108276 1210 ntAPPRIS P1 TSL 1 (best) BASIC7.44□□□□□ -1.22
NpcdF8VQB8 Klrd1-202ENSMUST00000112063 895 ntAPPRIS P2 TSL 1 (best) BASIC7.44□□□□□ -1.22
NpcdF8VQB8 Xlr5d-ps-201ENSMUST00000117501 782 ntBASIC7.44□□□□□ -1.22
NpcdF8VQB8 Gm14751-201ENSMUST00000117693 222 ntBASIC7.44□□□□□ -1.22
NpcdF8VQB8 Gm15021-201ENSMUST00000117832 742 ntBASIC7.44□□□□□ -1.22
NpcdF8VQB8 Olfr587-ps1-201ENSMUST00000118378 948 ntAPPRIS P1 BASIC7.44□□□□□ -1.22
NpcdF8VQB8 Gm14267-201ENSMUST00000119751 496 ntBASIC7.44□□□□□ -1.22
NpcdF8VQB8 Gm7879-201ENSMUST00000122204 774 ntAPPRIS P1 BASIC7.44□□□□□ -1.22
NpcdF8VQB8 Gm16135-201ENSMUST00000129470 568 ntTSL 1 (best) BASIC7.44□□□□□ -1.22
NpcdF8VQB8 Junos-206ENSMUST00000133772 635 ntTSL 2 BASIC7.44□□□□□ -1.22
NpcdF8VQB8 1700061J23Rik-201ENSMUST00000141678 537 ntTSL 1 (best) BASIC7.44□□□□□ -1.22
NpcdF8VQB8 Gm15868-201ENSMUST00000144291 520 ntTSL 5 BASIC7.44□□□□□ -1.22
NpcdF8VQB8 1700095A21Rik-201ENSMUST00000145269 1069 ntTSL 1 (best) BASIC7.44□□□□□ -1.22
NpcdF8VQB8 Gm15657-203ENSMUST00000163077 779 ntTSL 3 BASIC7.44□□□□□ -1.22
NpcdF8VQB8 Vmn1r-ps79-201ENSMUST00000173508 963 ntBASIC7.44□□□□□ -1.22
NpcdF8VQB8 Vmn1r-ps70-201ENSMUST00000173675 963 ntBASIC7.44□□□□□ -1.22
NpcdF8VQB8 Gm5139-201ENSMUST00000175943 249 ntBASIC7.44□□□□□ -1.22
NpcdF8VQB8 Gm21917-201ENSMUST00000177831 666 ntTSL 2 BASIC7.44□□□□□ -1.22
NpcdF8VQB8 Gm27225-201ENSMUST00000183833 557 ntBASIC7.44□□□□□ -1.22
NpcdF8VQB8 Gm28956-201ENSMUST00000189047 427 ntBASIC7.44□□□□□ -1.22
NpcdF8VQB8 Gm28640-201ENSMUST00000190918 550 ntBASIC7.44□□□□□ -1.22
NpcdF8VQB8 4930563F08Rik-201ENSMUST00000198640 515 ntTSL 1 (best) BASIC7.44□□□□□ -1.22
NpcdF8VQB8 Gm44382-201ENSMUST00000198683 122 ntBASIC7.44□□□□□ -1.22
NpcdF8VQB8 Gm44281-201ENSMUST00000203090 166 ntBASIC7.44□□□□□ -1.22
NpcdF8VQB8 Gm44050-201ENSMUST00000204263 527 ntBASIC7.44□□□□□ -1.22
NpcdF8VQB8 Gm18007-201ENSMUST00000205019 844 ntBASIC7.44□□□□□ -1.22
NpcdF8VQB8 Gm32846-201ENSMUST00000205665 842 ntTSL 1 (best) BASIC7.44□□□□□ -1.22
NpcdF8VQB8 Gm34549-202ENSMUST00000207356 970 ntTSL 5 BASIC7.44□□□□□ -1.22
NpcdF8VQB8 4930503L19Rik-202ENSMUST00000211817 913 ntTSL 1 (best) BASIC7.44□□□□□ -1.22
NpcdF8VQB8 Gm45777-201ENSMUST00000213009 301 ntBASIC7.44□□□□□ -1.22
NpcdF8VQB8 Gm18387-201ENSMUST00000220333 702 ntBASIC7.44□□□□□ -1.22
NpcdF8VQB8 Gm6049-201ENSMUST00000222369 458 ntBASIC7.44□□□□□ -1.22
NpcdF8VQB8 AC121960.3-201ENSMUST00000227077 623 ntBASIC7.44□□□□□ -1.22
NpcdF8VQB8 Fabp2-201ENSMUST00000023820 965 ntAPPRIS P1 TSL 1 (best) BASIC7.44□□□□□ -1.22
NpcdF8VQB8 Klrd1-201ENSMUST00000032268 586 ntAPPRIS ALT2 TSL 5 BASIC7.44□□□□□ -1.22
NpcdF8VQB8 Olfr424-201ENSMUST00000053941 948 ntAPPRIS P1 BASIC7.44□□□□□ -1.22
NpcdF8VQB8 Sprr3-201ENSMUST00000058142 1222 ntAPPRIS P1 TSL 3 BASIC7.44□□□□□ -1.22
NpcdF8VQB8 Vmn1r177-201ENSMUST00000073967 930 ntAPPRIS P1 BASIC7.44□□□□□ -1.22
NpcdF8VQB8 Gm25403-201ENSMUST00000082971 143 ntBASIC7.44□□□□□ -1.22
NpcdF8VQB8 Krtap31-1-201ENSMUST00000093935 973 ntAPPRIS P1 BASIC7.44□□□□□ -1.22
NpcdF8VQB8 Gm10665-201ENSMUST00000098720 966 ntAPPRIS P1 BASIC7.44□□□□□ -1.22
NpcdF8VQB8 Gm10670-201ENSMUST00000098744 966 ntAPPRIS P1 BASIC7.44□□□□□ -1.22
NpcdF8VQB8 4921539E11Rik-201ENSMUST00000030245 2448 ntAPPRIS P1 TSL 1 (best) BASIC7.44□□□□□ -1.22
NpcdF8VQB8 Cnpy1-205ENSMUST00000141601 3018 ntAPPRIS P1 TSL 1 (best) BASIC7.44□□□□□ -1.22
NpcdF8VQB8 Cyld-202ENSMUST00000098519 7954 ntAPPRIS ALT1 TSL 5 BASIC7.44□□□□□ -1.22
NpcdF8VQB8 Tfb1m-201ENSMUST00000041003 1327 ntAPPRIS P1 TSL 1 (best) BASIC7.44□□□□□ -1.22
NpcdF8VQB8 Gm42541-201ENSMUST00000199871 2249 ntBASIC7.44□□□□□ -1.22
NpcdF8VQB8 Gm16325-201ENSMUST00000141199 3174 ntTSL 1 (best) BASIC7.44□□□□□ -1.22
NpcdF8VQB8 Gm43588-201ENSMUST00000201862 2298 ntBASIC7.44□□□□□ -1.22
NpcdF8VQB8 Zfp811-201ENSMUST00000080905 1656 ntTSL 5 BASIC7.44□□□□□ -1.22
NpcdF8VQB8 Bicd1-201ENSMUST00000003544 2928 ntAPPRIS ALT1 TSL 5 BASIC7.44□□□□□ -1.22
NpcdF8VQB8 Vmn1r35-203ENSMUST00000227354 2319 ntAPPRIS P1 BASIC7.44□□□□□ -1.22
NpcdF8VQB8 Pard3-212ENSMUST00000160717 4214 ntTSL 1 (best) BASIC7.44□□□□□ -1.22
NpcdF8VQB8 Vmn1r176-204ENSMUST00000227129 2955 ntAPPRIS P1 BASIC7.44□□□□□ -1.22
NpcdF8VQB8 Vmn1r176-207ENSMUST00000228793 2959 ntAPPRIS P1 BASIC7.44□□□□□ -1.22
NpcdF8VQB8 Krcc1-202ENSMUST00000168700 1749 ntAPPRIS P1 TSL 1 (best) BASIC7.44□□□□□ -1.22
NpcdF8VQB8 Gm8141-201ENSMUST00000190856 1723 ntBASIC7.44□□□□□ -1.22
NpcdF8VQB8 Gm42436-201ENSMUST00000198804 3656 ntBASIC7.43□□□□□ -1.22
NpcdF8VQB8 Olfr1015-203ENSMUST00000215945 2479 ntAPPRIS P1 TSL 5 BASIC7.43□□□□□ -1.22
NpcdF8VQB8 Cdh9-202ENSMUST00000228307 3539 ntAPPRIS P1 BASIC7.43□□□□□ -1.22
NpcdF8VQB8 Serpinb9f-201ENSMUST00000075515 1912 ntAPPRIS P1 TSL 1 (best) BASIC7.43□□□□□ -1.22
NpcdF8VQB8 Zfp87-204ENSMUST00000181767 2656 ntAPPRIS P1 TSL 1 (best) BASIC7.43□□□□□ -1.22
NpcdF8VQB8 Gm4954-201ENSMUST00000135069 1601 ntBASIC7.43□□□□□ -1.22
NpcdF8VQB8 Defb30-201ENSMUST00000100490 307 ntAPPRIS P2 TSL 1 (best) BASIC7.43□□□□□ -1.22
NpcdF8VQB8 Mir1188-201ENSMUST00000116756 120 ntBASIC7.43□□□□□ -1.22
NpcdF8VQB8 Gm11972-201ENSMUST00000118514 389 ntBASIC7.43□□□□□ -1.22
NpcdF8VQB8 Gm8855-201ENSMUST00000118888 878 ntBASIC7.43□□□□□ -1.22
NpcdF8VQB8 Gm11359-201ENSMUST00000120039 567 ntBASIC7.43□□□□□ -1.22
Retrieved 100 of 76,532 protein–RNA pairs in 62.7 ms