Protein–RNA interactions for Protein: A2ASI5

Scn3a, Sodium channel protein, mousemouse

Predictions only

Length 1,947 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn3aA2ASI5 Rorb-201ENSMUST00000040153 8759 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
Scn3aA2ASI5 Ccr9-204ENSMUST00000168910 2888 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
Scn3aA2ASI5 Xkrx-201ENSMUST00000033611 2876 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
Scn3aA2ASI5 Slc24a2-204ENSMUST00000107158 10499 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
Scn3aA2ASI5 Cenpe-201ENSMUST00000062893 7910 ntAPPRIS P1 TSL 5 BASIC5.76□□□□□ -1.49
Scn3aA2ASI5 Gm43788-201ENSMUST00000201539 2417 ntBASIC5.76□□□□□ -1.49
Scn3aA2ASI5 AW046200-203ENSMUST00000211787 2479 ntBASIC5.76□□□□□ -1.49
Scn3aA2ASI5 Pdc-202ENSMUST00000185698 3335 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
Scn3aA2ASI5 Zfp353-ps-201ENSMUST00000107130 1650 ntBASIC5.76□□□□□ -1.49
Scn3aA2ASI5 Gm26523-201ENSMUST00000180713 1658 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
Scn3aA2ASI5 Igkv10-94-201ENSMUST00000103330 347 ntAPPRIS P1 BASIC5.76□□□□□ -1.49
Scn3aA2ASI5 Gm14086-201ENSMUST00000117152 173 ntBASIC5.76□□□□□ -1.49
Scn3aA2ASI5 Gm12285-201ENSMUST00000117347 233 ntBASIC5.76□□□□□ -1.49
Scn3aA2ASI5 Gm12073-201ENSMUST00000117382 524 ntBASIC5.76□□□□□ -1.49
Scn3aA2ASI5 Gm11346-201ENSMUST00000118346 704 ntBASIC5.76□□□□□ -1.49
Scn3aA2ASI5 Xlr3e-ps-201ENSMUST00000119644 682 ntBASIC5.76□□□□□ -1.49
Scn3aA2ASI5 Defa-ps14-201ENSMUST00000121373 418 ntBASIC5.76□□□□□ -1.49
Scn3aA2ASI5 Xlr3d-ps-201ENSMUST00000121687 658 ntBASIC5.76□□□□□ -1.49
Scn3aA2ASI5 Gm25103-201ENSMUST00000122671 318 ntBASIC5.76□□□□□ -1.49
Scn3aA2ASI5 Gm12256-201ENSMUST00000132394 446 ntTSL 3 BASIC5.76□□□□□ -1.49
Scn3aA2ASI5 Gm14011-201ENSMUST00000145178 302 ntTSL 2 BASIC5.76□□□□□ -1.49
Scn3aA2ASI5 Gm23513-201ENSMUST00000158181 133 ntBASIC5.76□□□□□ -1.49
Scn3aA2ASI5 Plgrkt-201ENSMUST00000016639 1012 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
Scn3aA2ASI5 Vmn1r-ps77-201ENSMUST00000174184 921 ntBASIC5.76□□□□□ -1.49
Scn3aA2ASI5 Vmn1r-ps75-201ENSMUST00000174316 920 ntBASIC5.76□□□□□ -1.49
Scn3aA2ASI5 Gm16456-201ENSMUST00000174431 920 ntBASIC5.76□□□□□ -1.49
Scn3aA2ASI5 Olfr1217-202ENSMUST00000213669 3839 ntAPPRIS P1 TSL 5 BASIC5.76□□□□□ -1.49
Scn3aA2ASI5 AC157515.1-201ENSMUST00000220953 450 ntBASIC5.76□□□□□ -1.49
Scn3aA2ASI5 AC137117.1-201ENSMUST00000226912 441 ntBASIC5.76□□□□□ -1.49
Scn3aA2ASI5 Olfr1467-201ENSMUST00000054687 927 ntAPPRIS P1 BASIC5.76□□□□□ -1.49
Scn3aA2ASI5 Olfr738-201ENSMUST00000058972 936 ntAPPRIS P1 BASIC5.76□□□□□ -1.49
Scn3aA2ASI5 Olfr739-201ENSMUST00000075261 930 ntAPPRIS P1 BASIC5.76□□□□□ -1.49
Scn3aA2ASI5 Xlr5c-201ENSMUST00000088450 540 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
Scn3aA2ASI5 Gm42772-201ENSMUST00000199945 3041 ntBASIC5.76□□□□□ -1.49
Scn3aA2ASI5 Setd2-201ENSMUST00000153838 8350 ntAPPRIS P1 TSL 5 BASIC5.76□□□□□ -1.49
Scn3aA2ASI5 AC164092.3-201ENSMUST00000216970 1323 ntBASIC5.76□□□□□ -1.49
Scn3aA2ASI5 Prame-201ENSMUST00000033786 1395 ntAPPRIS P1 TSL 5 BASIC5.76□□□□□ -1.49
Scn3aA2ASI5 Rnf2-204ENSMUST00000187048 3201 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
Scn3aA2ASI5 Vmn2r2-201ENSMUST00000077958 2484 ntAPPRIS P2 TSL 5 BASIC5.76□□□□□ -1.49
Scn3aA2ASI5 AC118639.1-203ENSMUST00000228425 2016 ntBASIC5.76□□□□□ -1.49
Scn3aA2ASI5 Rfx4-202ENSMUST00000060397 3534 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
Scn3aA2ASI5 Ranbp3l-201ENSMUST00000053308 3017 ntAPPRIS P1 TSL 5 BASIC5.76□□□□□ -1.49
Scn3aA2ASI5 Slfn14-201ENSMUST00000163961 3706 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
Scn3aA2ASI5 Macrod2-203ENSMUST00000110061 887 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
Scn3aA2ASI5 Gm14711-201ENSMUST00000117056 217 ntBASIC5.76□□□□□ -1.49
Scn3aA2ASI5 Gm15168-201ENSMUST00000121057 316 ntBASIC5.76□□□□□ -1.49
Scn3aA2ASI5 Gm13147-201ENSMUST00000125785 585 ntTSL 2 BASIC5.76□□□□□ -1.49
Scn3aA2ASI5 Bloc1s1-202ENSMUST00000131271 475 ntTSL 5 BASIC5.76□□□□□ -1.49
Scn3aA2ASI5 4930551O13Rik-201ENSMUST00000145585 1065 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
Scn3aA2ASI5 Vmn1r60-201ENSMUST00000173782 1007 ntAPPRIS P1 BASIC5.76□□□□□ -1.49
Scn3aA2ASI5 Gm27039-201ENSMUST00000182438 962 ntBASIC5.76□□□□□ -1.49
Scn3aA2ASI5 Mir7031-201ENSMUST00000183860 65 ntBASIC5.76□□□□□ -1.49
Scn3aA2ASI5 Gm28957-201ENSMUST00000190174 373 ntBASIC5.76□□□□□ -1.49
Scn3aA2ASI5 Gm42452-201ENSMUST00000199749 617 ntBASIC5.76□□□□□ -1.49
Scn3aA2ASI5 Gm43919-201ENSMUST00000204303 364 ntBASIC5.76□□□□□ -1.49
Scn3aA2ASI5 Gm44952-201ENSMUST00000204443 433 ntBASIC5.76□□□□□ -1.49
Scn3aA2ASI5 Gm44515-201ENSMUST00000209045 379 ntTSL 5 BASIC5.76□□□□□ -1.49
Scn3aA2ASI5 Olfr494-201ENSMUST00000209743 1002 ntAPPRIS P1 TSL 3 BASIC5.76□□□□□ -1.49
Scn3aA2ASI5 Olfr494-202ENSMUST00000210291 947 ntAPPRIS P1 BASIC5.76□□□□□ -1.49
Scn3aA2ASI5 6430710M23Rik-201ENSMUST00000210843 1191 ntBASIC5.76□□□□□ -1.49
Scn3aA2ASI5 Gm8137-201ENSMUST00000218997 463 ntBASIC5.76□□□□□ -1.49
Scn3aA2ASI5 AC127279.1-201ENSMUST00000220140 637 ntBASIC5.76□□□□□ -1.49
Scn3aA2ASI5 Dnah12-202ENSMUST00000073309 611 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
Scn3aA2ASI5 Gm23796-201ENSMUST00000084011 160 ntBASIC5.76□□□□□ -1.49
Scn3aA2ASI5 Cntnap5c-201ENSMUST00000076038 3931 ntAPPRIS P1 TSL 2 BASIC5.76□□□□□ -1.49
Scn3aA2ASI5 AC116797.1-201ENSMUST00000223988 3955 ntAPPRIS P1 BASIC5.76□□□□□ -1.49
Scn3aA2ASI5 Slc4a10-202ENSMUST00000102735 5482 ntAPPRIS P3 TSL 1 (best) BASIC5.75□□□□□ -1.49
Scn3aA2ASI5 Gm37023-201ENSMUST00000192895 2426 ntBASIC5.75□□□□□ -1.49
Scn3aA2ASI5 Celf2-201ENSMUST00000002176 7718 ntAPPRIS P3 TSL 1 (best) BASIC5.75□□□□□ -1.49
Scn3aA2ASI5 4930532I03Rik-201ENSMUST00000218463 1724 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
Scn3aA2ASI5 Gm3182-201ENSMUST00000167902 1753 ntAPPRIS P5 TSL 5 BASIC5.75□□□□□ -1.49
Scn3aA2ASI5 6820402A03Rik-201ENSMUST00000194648 2654 ntBASIC5.75□□□□□ -1.49
Scn3aA2ASI5 Olfr1346-203ENSMUST00000215302 4525 ntAPPRIS P1 TSL 5 BASIC5.75□□□□□ -1.49
Scn3aA2ASI5 Gm37767-201ENSMUST00000193239 1834 ntBASIC5.75□□□□□ -1.49
Scn3aA2ASI5 Gm16513-201ENSMUST00000101023 2832 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
Scn3aA2ASI5 Gm4922-201ENSMUST00000055107 1950 ntAPPRIS P1 TSL 3 BASIC5.75□□□□□ -1.49
Scn3aA2ASI5 Plcb4-202ENSMUST00000110109 5217 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
Scn3aA2ASI5 Gm13506-201ENSMUST00000120391 1083 ntBASIC5.75□□□□□ -1.49
Scn3aA2ASI5 Gm24628-201ENSMUST00000122761 289 ntBASIC5.75□□□□□ -1.49
Scn3aA2ASI5 1700007M16Rik-201ENSMUST00000129075 435 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
Scn3aA2ASI5 Gm568-201ENSMUST00000135777 506 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
Scn3aA2ASI5 4930563I02Rik-202ENSMUST00000154835 971 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
Scn3aA2ASI5 Gm26312-201ENSMUST00000157769 165 ntBASIC5.75□□□□□ -1.49
Scn3aA2ASI5 Gm7271-201ENSMUST00000172369 519 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
Scn3aA2ASI5 Gm33206-201ENSMUST00000193544 454 ntTSL 2 BASIC5.75□□□□□ -1.49
Scn3aA2ASI5 Gm37973-201ENSMUST00000195767 1289 ntBASIC5.75□□□□□ -1.49
Scn3aA2ASI5 Gm9317-201ENSMUST00000197055 862 ntBASIC5.75□□□□□ -1.49
Scn3aA2ASI5 Gm18537-201ENSMUST00000205709 989 ntBASIC5.75□□□□□ -1.49
Scn3aA2ASI5 Olfr1075-ps1-201ENSMUST00000214201 470 ntBASIC5.75□□□□□ -1.49
Scn3aA2ASI5 Gm22826-201ENSMUST00000083774 165 ntBASIC5.75□□□□□ -1.49
Scn3aA2ASI5 Zpld1-201ENSMUST00000036412 2589 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
Scn3aA2ASI5 Klhl24-201ENSMUST00000023509 6683 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
Scn3aA2ASI5 Gm13582-201ENSMUST00000146034 2655 ntTSL 2 BASIC5.75□□□□□ -1.49
Scn3aA2ASI5 Cntnap5a-201ENSMUST00000043725 10945 ntAPPRIS P1 TSL 2 BASIC5.75□□□□□ -1.49
Scn3aA2ASI5 Igsf10-203ENSMUST00000194546 8393 ntAPPRIS P1 TSL 5 BASIC5.75□□□□□ -1.49
Scn3aA2ASI5 Olfr615-203ENSMUST00000215673 3469 ntAPPRIS P1 TSL 5 BASIC5.75□□□□□ -1.49
Scn3aA2ASI5 8430419K02Rik-201ENSMUST00000128654 1870 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
Scn3aA2ASI5 Dram2-201ENSMUST00000029507 1891 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
Scn3aA2ASI5 Gm14552-201ENSMUST00000126906 2098 ntTSL 5 BASIC5.75□□□□□ -1.49
Scn3aA2ASI5 Gm15638-201ENSMUST00000128159 2062 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
Retrieved 100 of 76,532 protein–RNA pairs in 72.6 ms