Protein–RNA interactions for Protein: Q9R1R2

Trim3, Tripartite motif-containing protein 3, mousemouse

Predictions only

Length 744 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim3Q9R1R2 Uhmk1-203ENSMUST00000150821 7676 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
Trim3Q9R1R2 Gm12931-201ENSMUST00000117046 324 ntBASIC5.08□□□□□ -1.6
Trim3Q9R1R2 Gm11826-201ENSMUST00000118781 438 ntBASIC5.08□□□□□ -1.6
Trim3Q9R1R2 Gm11699-201ENSMUST00000119016 401 ntBASIC5.08□□□□□ -1.6
Trim3Q9R1R2 Mup-ps19-201ENSMUST00000120390 519 ntBASIC5.08□□□□□ -1.6
Trim3Q9R1R2 Gm13506-201ENSMUST00000120391 1083 ntBASIC5.08□□□□□ -1.6
Trim3Q9R1R2 4933416E03Rik-201ENSMUST00000133091 1126 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
Trim3Q9R1R2 Gm12147-201ENSMUST00000144024 182 ntTSL 3 BASIC5.08□□□□□ -1.6
Trim3Q9R1R2 Gm25846-201ENSMUST00000158013 135 ntBASIC5.08□□□□□ -1.6
Trim3Q9R1R2 Gm3170-201ENSMUST00000168753 850 ntBASIC5.08□□□□□ -1.6
Trim3Q9R1R2 Gm24561-201ENSMUST00000175182 95 ntBASIC5.08□□□□□ -1.6
Trim3Q9R1R2 Gm3348-201ENSMUST00000177813 850 ntBASIC5.08□□□□□ -1.6
Trim3Q9R1R2 Gm3696-202ENSMUST00000179898 612 ntAPPRIS P1 TSL 5 BASIC5.08□□□□□ -1.6
Trim3Q9R1R2 Gm4258-201ENSMUST00000182127 506 ntTSL 2 BASIC5.08□□□□□ -1.6
Trim3Q9R1R2 Gm27148-201ENSMUST00000185086 160 ntBASIC5.08□□□□□ -1.6
Trim3Q9R1R2 Gm28943-201ENSMUST00000186187 615 ntBASIC5.08□□□□□ -1.6
Trim3Q9R1R2 Gm28736-201ENSMUST00000186257 615 ntBASIC5.08□□□□□ -1.6
Trim3Q9R1R2 Gm28660-201ENSMUST00000186496 253 ntBASIC5.08□□□□□ -1.6
Trim3Q9R1R2 Gm29401-201ENSMUST00000186690 615 ntBASIC5.08□□□□□ -1.6
Trim3Q9R1R2 Gm29178-204ENSMUST00000186784 615 ntBASIC5.08□□□□□ -1.6
Trim3Q9R1R2 Gm28589-201ENSMUST00000186991 615 ntBASIC5.08□□□□□ -1.6
Trim3Q9R1R2 Gm28936-201ENSMUST00000187153 615 ntBASIC5.08□□□□□ -1.6
Trim3Q9R1R2 Gm29121-201ENSMUST00000187611 615 ntBASIC5.08□□□□□ -1.6
Trim3Q9R1R2 Gm28243-201ENSMUST00000187801 615 ntBASIC5.08□□□□□ -1.6
Trim3Q9R1R2 Gm28844-202ENSMUST00000187977 615 ntBASIC5.08□□□□□ -1.6
Trim3Q9R1R2 Gm29058-201ENSMUST00000189510 615 ntBASIC5.08□□□□□ -1.6
Trim3Q9R1R2 Gm29624-201ENSMUST00000190018 615 ntBASIC5.08□□□□□ -1.6
Trim3Q9R1R2 Gm28780-201ENSMUST00000190223 615 ntBASIC5.08□□□□□ -1.6
Trim3Q9R1R2 Gm28969-211ENSMUST00000190992 615 ntBASIC5.08□□□□□ -1.6
Trim3Q9R1R2 Gm28990-207ENSMUST00000191219 615 ntBASIC5.08□□□□□ -1.6
Trim3Q9R1R2 Gm36468-201ENSMUST00000192119 615 ntBASIC5.08□□□□□ -1.6
Trim3Q9R1R2 Gm36994-201ENSMUST00000192941 492 ntBASIC5.08□□□□□ -1.6
Trim3Q9R1R2 Gm31572-201ENSMUST00000193341 615 ntBASIC5.08□□□□□ -1.6
Trim3Q9R1R2 Gm30175-201ENSMUST00000194173 615 ntBASIC5.08□□□□□ -1.6
Trim3Q9R1R2 Gm37030-201ENSMUST00000194254 295 ntBASIC5.08□□□□□ -1.6
Trim3Q9R1R2 Gm30858-201ENSMUST00000195516 615 ntBASIC5.08□□□□□ -1.6
Trim3Q9R1R2 Gm43078-201ENSMUST00000197222 168 ntBASIC5.08□□□□□ -1.6
Trim3Q9R1R2 Gm42652-201ENSMUST00000199073 614 ntBASIC5.08□□□□□ -1.6
Trim3Q9R1R2 4930519L02Rik-202ENSMUST00000200254 452 ntTSL 3 BASIC5.08□□□□□ -1.6
Trim3Q9R1R2 Gm18482-201ENSMUST00000202405 760 ntBASIC5.08□□□□□ -1.6
Trim3Q9R1R2 Gm44221-201ENSMUST00000203552 388 ntBASIC5.08□□□□□ -1.6
Trim3Q9R1R2 Gm45574-201ENSMUST00000210921 331 ntBASIC5.08□□□□□ -1.6
Trim3Q9R1R2 Gm45874-201ENSMUST00000212423 346 ntBASIC5.08□□□□□ -1.6
Trim3Q9R1R2 Olfr878-202ENSMUST00000212878 1064 ntAPPRIS P1 BASIC5.08□□□□□ -1.6
Trim3Q9R1R2 Gm18705-201ENSMUST00000215985 913 ntBASIC5.08□□□□□ -1.6
Trim3Q9R1R2 Gm19073-201ENSMUST00000219978 555 ntBASIC5.08□□□□□ -1.6
Trim3Q9R1R2 Gm18409-202ENSMUST00000220105 529 ntBASIC5.08□□□□□ -1.6
Trim3Q9R1R2 Fcer1a-201ENSMUST00000049706 998 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
Trim3Q9R1R2 Rybp-ps-201ENSMUST00000069489 681 ntBASIC5.08□□□□□ -1.6
Trim3Q9R1R2 Gm14296-201ENSMUST00000099007 3823 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
Trim3Q9R1R2 2210418O10Rik-201ENSMUST00000099009 3823 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
Trim3Q9R1R2 Obscn-202ENSMUST00000047441 24175 ntAPPRIS P1 TSL 5 BASIC5.08□□□□□ -1.6
Trim3Q9R1R2 Map9-206ENSMUST00000195640 6162 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
Trim3Q9R1R2 Olfr457-203ENSMUST00000204324 4275 ntAPPRIS P1 TSL 3 BASIC5.08□□□□□ -1.6
Trim3Q9R1R2 Eya4-201ENSMUST00000074366 3488 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
Trim3Q9R1R2 Gm37470-201ENSMUST00000193378 2798 ntBASIC5.08□□□□□ -1.6
Trim3Q9R1R2 Rnf2-204ENSMUST00000187048 3201 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
Trim3Q9R1R2 Ankrd49-202ENSMUST00000214456 3207 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
Trim3Q9R1R2 6820402A03Rik-201ENSMUST00000194648 2654 ntBASIC5.08□□□□□ -1.6
Trim3Q9R1R2 Clec4a1-201ENSMUST00000060484 1558 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
Trim3Q9R1R2 Vmn2r115-201ENSMUST00000168175 2574 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
Trim3Q9R1R2 Gm18852-201ENSMUST00000184149 3593 ntBASIC5.08□□□□□ -1.6
Trim3Q9R1R2 Hspa13-201ENSMUST00000046283 4069 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
Trim3Q9R1R2 Gm2366-201ENSMUST00000180753 3982 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
Trim3Q9R1R2 Serpina1f-203ENSMUST00000118101 1453 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
Trim3Q9R1R2 Clec2g-203ENSMUST00000142388 2404 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
Trim3Q9R1R2 Gm37018-201ENSMUST00000192441 3869 ntBASIC5.07□□□□□ -1.6
Trim3Q9R1R2 Vmn1r87-203ENSMUST00000227443 5319 ntAPPRIS P1 BASIC5.07□□□□□ -1.6
Trim3Q9R1R2 Ttn-202ENSMUST00000099980 16891 ntTSL 5 BASIC5.07□□□□□ -1.6
Trim3Q9R1R2 4930539J05Rik-201ENSMUST00000181619 1406 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
Trim3Q9R1R2 Gm42662-201ENSMUST00000202539 1431 ntBASIC5.07□□□□□ -1.6
Trim3Q9R1R2 Ceacam1-201ENSMUST00000098666 3656 ntAPPRIS ALT2 TSL 1 (best) BASIC5.07□□□□□ -1.6
Trim3Q9R1R2 Gm43162-201ENSMUST00000198292 1770 ntBASIC5.07□□□□□ -1.6
Trim3Q9R1R2 Clca3a1-202ENSMUST00000059091 3524 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
Trim3Q9R1R2 Il12rb2-202ENSMUST00000117441 2600 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
Trim3Q9R1R2 Vmn1r171-211ENSMUST00000228559 2637 ntAPPRIS ALT2 BASIC5.07□□□□□ -1.6
Trim3Q9R1R2 Vmn1r171-213ENSMUST00000228681 2633 ntAPPRIS ALT2 BASIC5.07□□□□□ -1.6
Trim3Q9R1R2 Traj7-201ENSMUST00000103733 59 ntAPPRIS P1 BASIC5.07□□□□□ -1.6
Trim3Q9R1R2 Gm21637-201ENSMUST00000105124 778 ntAPPRIS P1 BASIC5.07□□□□□ -1.6
Trim3Q9R1R2 Hmgn2l6-201ENSMUST00000115986 267 ntBASIC5.07□□□□□ -1.6
Trim3Q9R1R2 Gm15073-201ENSMUST00000117432 634 ntBASIC5.07□□□□□ -1.6
Trim3Q9R1R2 Gm14836-201ENSMUST00000118567 471 ntBASIC5.07□□□□□ -1.6
Trim3Q9R1R2 Gm12901-201ENSMUST00000118690 532 ntBASIC5.07□□□□□ -1.6
Trim3Q9R1R2 Gm12281-201ENSMUST00000119536 298 ntBASIC5.07□□□□□ -1.6
Trim3Q9R1R2 Gm5401-201ENSMUST00000122444 365 ntBASIC5.07□□□□□ -1.6
Trim3Q9R1R2 Tnfsf13os-202ENSMUST00000144033 578 ntTSL 5 BASIC5.07□□□□□ -1.6
Trim3Q9R1R2 Gm26172-201ENSMUST00000158421 134 ntBASIC5.07□□□□□ -1.6
Trim3Q9R1R2 Gm3008-201ENSMUST00000160566 571 ntBASIC5.07□□□□□ -1.6
Trim3Q9R1R2 Mir7235-201ENSMUST00000183796 56 ntBASIC5.07□□□□□ -1.6
Trim3Q9R1R2 Gm29540-201ENSMUST00000188207 337 ntTSL 3 BASIC5.07□□□□□ -1.6
Trim3Q9R1R2 Gm21803-201ENSMUST00000188897 693 ntBASIC5.07□□□□□ -1.6
Trim3Q9R1R2 Gm28075-201ENSMUST00000189179 354 ntTSL 3 BASIC5.07□□□□□ -1.6
Trim3Q9R1R2 Gm28567-201ENSMUST00000190270 693 ntBASIC5.07□□□□□ -1.6
Trim3Q9R1R2 Gm37932-201ENSMUST00000192258 1167 ntBASIC5.07□□□□□ -1.6
Trim3Q9R1R2 Gm37044-201ENSMUST00000193531 693 ntBASIC5.07□□□□□ -1.6
Trim3Q9R1R2 Gm37184-201ENSMUST00000194720 650 ntTSL 3 BASIC5.07□□□□□ -1.6
Trim3Q9R1R2 Gm38369-201ENSMUST00000195101 693 ntBASIC5.07□□□□□ -1.6
Trim3Q9R1R2 Zgrf1-202ENSMUST00000195955 3804 ntTSL 2 BASIC5.07□□□□□ -1.6
Trim3Q9R1R2 Gm43895-201ENSMUST00000203219 855 ntBASIC5.07□□□□□ -1.6
Trim3Q9R1R2 Gm44296-201ENSMUST00000204689 681 ntTSL 3 BASIC5.07□□□□□ -1.6
Retrieved 100 of 76,532 protein–RNA pairs in 70.6 ms