Protein–RNA interactions for Protein: Q9DCB1

Hmgn3, High mobility group nucleosome-binding domain-containing protein 3, mousemouse

Predictions only

Length 99 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmgn3Q9DCB1 Gm14106-201ENSMUST00000119382 438 ntBASIC4.79□□□□□ -1.64
Hmgn3Q9DCB1 Gm15493-201ENSMUST00000119461 528 ntBASIC4.79□□□□□ -1.64
Hmgn3Q9DCB1 Gm8545-201ENSMUST00000120692 801 ntBASIC4.79□□□□□ -1.64
Hmgn3Q9DCB1 Gm11882-201ENSMUST00000121463 506 ntBASIC4.79□□□□□ -1.64
Hmgn3Q9DCB1 Tbata-207ENSMUST00000140456 953 ntTSL 5 BASIC4.79□□□□□ -1.64
Hmgn3Q9DCB1 Vmn1r91-201ENSMUST00000165330 924 ntAPPRIS P1 BASIC4.79□□□□□ -1.64
Hmgn3Q9DCB1 Cox6b2-209ENSMUST00000184143 435 ntTSL 2 BASIC4.79□□□□□ -1.64
Hmgn3Q9DCB1 Gm29532-201ENSMUST00000185593 622 ntTSL 5 BASIC4.79□□□□□ -1.64
Hmgn3Q9DCB1 Gm29504-201ENSMUST00000185605 537 ntTSL 5 BASIC4.79□□□□□ -1.64
Hmgn3Q9DCB1 Gm29360-201ENSMUST00000185625 537 ntTSL 5 BASIC4.79□□□□□ -1.64
Hmgn3Q9DCB1 Gm28296-202ENSMUST00000186151 622 ntTSL 5 BASIC4.79□□□□□ -1.64
Hmgn3Q9DCB1 Gm29498-201ENSMUST00000186449 537 ntTSL 5 BASIC4.79□□□□□ -1.64
Hmgn3Q9DCB1 Gm28565-202ENSMUST00000186615 537 ntTSL 5 BASIC4.79□□□□□ -1.64
Hmgn3Q9DCB1 Gm28297-201ENSMUST00000186679 537 ntTSL 5 BASIC4.79□□□□□ -1.64
Hmgn3Q9DCB1 Gm28326-201ENSMUST00000187043 622 ntTSL 5 BASIC4.79□□□□□ -1.64
Hmgn3Q9DCB1 Gm28301-201ENSMUST00000187582 537 ntTSL 5 BASIC4.79□□□□□ -1.64
Hmgn3Q9DCB1 Gm28464-201ENSMUST00000187726 622 ntTSL 5 BASIC4.79□□□□□ -1.64
Hmgn3Q9DCB1 Gm29286-202ENSMUST00000187736 537 ntTSL 5 BASIC4.79□□□□□ -1.64
Hmgn3Q9DCB1 Gm28295-201ENSMUST00000188322 622 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
Hmgn3Q9DCB1 Gm29578-201ENSMUST00000188809 537 ntTSL 5 BASIC4.79□□□□□ -1.64
Hmgn3Q9DCB1 Gm18799-201ENSMUST00000189104 913 ntBASIC4.79□□□□□ -1.64
Hmgn3Q9DCB1 Gm29166-202ENSMUST00000189600 537 ntTSL 5 BASIC4.79□□□□□ -1.64
Hmgn3Q9DCB1 Gm28765-201ENSMUST00000189752 537 ntTSL 5 BASIC4.79□□□□□ -1.64
Hmgn3Q9DCB1 Gm28617-202ENSMUST00000190129 537 ntTSL 5 BASIC4.79□□□□□ -1.64
Hmgn3Q9DCB1 Gm28522-202ENSMUST00000190561 537 ntTSL 5 BASIC4.79□□□□□ -1.64
Hmgn3Q9DCB1 Gm28834-202ENSMUST00000190714 537 ntTSL 5 BASIC4.79□□□□□ -1.64
Hmgn3Q9DCB1 Gm28987-201ENSMUST00000191071 537 ntTSL 5 BASIC4.79□□□□□ -1.64
Hmgn3Q9DCB1 Gm29132-202ENSMUST00000191588 622 ntTSL 5 BASIC4.79□□□□□ -1.64
Hmgn3Q9DCB1 Gm30174-201ENSMUST00000191682 537 ntTSL 5 BASIC4.79□□□□□ -1.64
Hmgn3Q9DCB1 Gm36261-201ENSMUST00000191807 537 ntTSL 5 BASIC4.79□□□□□ -1.64
Hmgn3Q9DCB1 Gm38150-201ENSMUST00000192996 452 ntBASIC4.79□□□□□ -1.64
Hmgn3Q9DCB1 Gm2147-201ENSMUST00000193588 639 ntBASIC4.79□□□□□ -1.64
Hmgn3Q9DCB1 Gm34550-202ENSMUST00000195186 537 ntTSL 5 BASIC4.79□□□□□ -1.64
Hmgn3Q9DCB1 Gm32554-201ENSMUST00000196310 970 ntTSL 5 BASIC4.79□□□□□ -1.64
Hmgn3Q9DCB1 Gm3970-201ENSMUST00000198001 334 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
Hmgn3Q9DCB1 Gm29745-201ENSMUST00000198005 687 ntBASIC4.79□□□□□ -1.64
Hmgn3Q9DCB1 Gm43276-201ENSMUST00000199712 364 ntBASIC4.79□□□□□ -1.64
Hmgn3Q9DCB1 Gm43100-201ENSMUST00000202985 674 ntTSL 5 BASIC4.79□□□□□ -1.64
Hmgn3Q9DCB1 Gm44422-201ENSMUST00000204142 1025 ntBASIC4.79□□□□□ -1.64
Hmgn3Q9DCB1 Fxyd1-207ENSMUST00000205778 438 ntAPPRIS P1 TSL 3 BASIC4.79□□□□□ -1.64
Hmgn3Q9DCB1 Gm44733-201ENSMUST00000208067 543 ntTSL 3 BASIC4.79□□□□□ -1.64
Hmgn3Q9DCB1 AC153548.2-201ENSMUST00000219770 885 ntBASIC4.79□□□□□ -1.64
Hmgn3Q9DCB1 AC160105.1-201ENSMUST00000221931 682 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
Hmgn3Q9DCB1 Elk3-205ENSMUST00000223340 750 ntTSL 5 BASIC4.79□□□□□ -1.64
Hmgn3Q9DCB1 AC116596.2-203ENSMUST00000227345 731 ntBASIC4.79□□□□□ -1.64
Hmgn3Q9DCB1 1700013H16Rik-201ENSMUST00000067940 1224 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
Hmgn3Q9DCB1 Olfr516-201ENSMUST00000071410 945 ntAPPRIS P1 BASIC4.79□□□□□ -1.64
Hmgn3Q9DCB1 Vmn1r210-203ENSMUST00000226294 3500 ntAPPRIS P1 BASIC4.79□□□□□ -1.64
Hmgn3Q9DCB1 Trim12c-201ENSMUST00000059037 3740 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
Hmgn3Q9DCB1 Tcf12-207ENSMUST00000183918 4308 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
Hmgn3Q9DCB1 Atp6v1g3-201ENSMUST00000027643 1887 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
Hmgn3Q9DCB1 Gm34921-201ENSMUST00000219528 1406 ntTSL 5 BASIC4.79□□□□□ -1.64
Hmgn3Q9DCB1 Cts3-201ENSMUST00000054702 1442 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
Hmgn3Q9DCB1 Gm45853-201ENSMUST00000212310 3171 ntBASIC4.79□□□□□ -1.64
Hmgn3Q9DCB1 Olfr123-203ENSMUST00000216051 2716 ntAPPRIS P1 TSL 5 BASIC4.79□□□□□ -1.64
Hmgn3Q9DCB1 4930431P03Rik-202ENSMUST00000166127 4237 ntTSL 2 BASIC4.79□□□□□ -1.64
Hmgn3Q9DCB1 Clec4a2-202ENSMUST00000041779 2481 ntAPPRIS P3 TSL 1 (best) BASIC4.79□□□□□ -1.64
Hmgn3Q9DCB1 Gm29536-201ENSMUST00000189296 3283 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
Hmgn3Q9DCB1 Hdx-202ENSMUST00000113422 9534 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
Hmgn3Q9DCB1 A230057D06Rik-203ENSMUST00000208953 3357 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
Hmgn3Q9DCB1 Olfr685-203ENSMUST00000214712 3326 ntAPPRIS ALT2 TSL 5 BASIC4.78□□□□□ -1.64
Hmgn3Q9DCB1 Slfn8-203ENSMUST00000108152 3083 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
Hmgn3Q9DCB1 Rsrc2-210ENSMUST00000182489 1665 ntTSL 5 BASIC4.78□□□□□ -1.64
Hmgn3Q9DCB1 Tcrg-V3-201ENSMUST00000103559 350 ntAPPRIS ALT2 BASIC4.78□□□□□ -1.64
Hmgn3Q9DCB1 Dbi-202ENSMUST00000112648 504 ntTSL 2 BASIC4.78□□□□□ -1.64
Hmgn3Q9DCB1 Gm14369-201ENSMUST00000121355 285 ntBASIC4.78□□□□□ -1.64
Hmgn3Q9DCB1 Gm8761-201ENSMUST00000121507 955 ntBASIC4.78□□□□□ -1.64
Hmgn3Q9DCB1 Olfr1021-ps1-201ENSMUST00000121914 1042 ntAPPRIS P1 TSL 3 BASIC4.78□□□□□ -1.64
Hmgn3Q9DCB1 Gm13211-201ENSMUST00000141649 697 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
Hmgn3Q9DCB1 Gm13411-201ENSMUST00000149429 414 ntTSL 2 BASIC4.78□□□□□ -1.64
Hmgn3Q9DCB1 Scarna13-201ENSMUST00000158164 275 ntBASIC4.78□□□□□ -1.64
Hmgn3Q9DCB1 Gm15995-201ENSMUST00000159897 574 ntTSL 5 BASIC4.78□□□□□ -1.64
Hmgn3Q9DCB1 Gm16102-201ENSMUST00000160955 420 ntBASIC4.78□□□□□ -1.64
Hmgn3Q9DCB1 Vmn2r-ps72-201ENSMUST00000172586 907 ntBASIC4.78□□□□□ -1.64
Hmgn3Q9DCB1 Tcrg-C4-201ENSMUST00000179181 985 ntAPPRIS P1 BASIC4.78□□□□□ -1.64
Hmgn3Q9DCB1 Gm27030-201ENSMUST00000182551 464 ntBASIC4.78□□□□□ -1.64
Hmgn3Q9DCB1 Gm29377-201ENSMUST00000185892 1161 ntTSL 5 BASIC4.78□□□□□ -1.64
Hmgn3Q9DCB1 Gm29289-201ENSMUST00000188358 576 ntAPPRIS P1 TSL 5 BASIC4.78□□□□□ -1.64
Hmgn3Q9DCB1 Gm29467-202ENSMUST00000189669 935 ntTSL 5 BASIC4.78□□□□□ -1.64
Hmgn3Q9DCB1 Gm29633-207ENSMUST00000190523 737 ntTSL 5 BASIC4.78□□□□□ -1.64
Hmgn3Q9DCB1 Gm20940-201ENSMUST00000197308 360 ntBASIC4.78□□□□□ -1.64
Hmgn3Q9DCB1 4930599N24Rik-201ENSMUST00000198822 1003 ntBASIC4.78□□□□□ -1.64
Hmgn3Q9DCB1 Oaz3-204ENSMUST00000199678 935 ntAPPRIS ALT2 TSL 5 BASIC4.78□□□□□ -1.64
Hmgn3Q9DCB1 Gm4874-201ENSMUST00000203589 691 ntBASIC4.78□□□□□ -1.64
Hmgn3Q9DCB1 Gm34549-202ENSMUST00000207356 970 ntTSL 5 BASIC4.78□□□□□ -1.64
Hmgn3Q9DCB1 Gm44788-201ENSMUST00000207605 385 ntTSL 5 BASIC4.78□□□□□ -1.64
Hmgn3Q9DCB1 AC153729.3-201ENSMUST00000213319 781 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
Hmgn3Q9DCB1 AC154808.1-201ENSMUST00000223156 730 ntTSL 5 BASIC4.78□□□□□ -1.64
Hmgn3Q9DCB1 AC159252.1-201ENSMUST00000224450 553 ntBASIC4.78□□□□□ -1.64
Hmgn3Q9DCB1 AC121912.1-201ENSMUST00000227525 1201 ntBASIC4.78□□□□□ -1.64
Hmgn3Q9DCB1 Gpr21-201ENSMUST00000065441 3619 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
Hmgn3Q9DCB1 Elavl4-204ENSMUST00000106598 3997 ntAPPRIS ALT1 TSL 5 BASIC4.78□□□□□ -1.64
Hmgn3Q9DCB1 Mga-203ENSMUST00000110773 13577 ntAPPRIS ALT2 TSL 5 BASIC4.78□□□□□ -1.64
Hmgn3Q9DCB1 Ano5-203ENSMUST00000207717 2753 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
Hmgn3Q9DCB1 Gm5117-201ENSMUST00000178878 2553 ntBASIC4.78□□□□□ -1.64
Hmgn3Q9DCB1 Gm2099-202ENSMUST00000223310 3341 ntBASIC4.78□□□□□ -1.64
Hmgn3Q9DCB1 Nop58-215ENSMUST00000191142 9507 ntAPPRIS P2 TSL 1 (best) BASIC4.78□□□□□ -1.64
Hmgn3Q9DCB1 Olfr376-203ENSMUST00000170592 3211 ntAPPRIS P3 TSL 2 BASIC4.78□□□□□ -1.64
Hmgn3Q9DCB1 Vmn1r6-205ENSMUST00000227631 7805 ntAPPRIS ALT2 BASIC4.77□□□□□ -1.65
Hmgn3Q9DCB1 5330411O13Rik-201ENSMUST00000205759 1544 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
Retrieved 100 of 76,532 protein–RNA pairs in 79.1 ms