Protein–RNA interactions for Protein: Q9D0R4

Ddx56, Probable ATP-dependent RNA helicase DDX56, mousemouse

Known RBP Predictions only

Length 546 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx56Q9D0R4 Gm37126-201ENSMUST00000195289 883 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
Ddx56Q9D0R4 Gm43507-201ENSMUST00000196411 675 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
Ddx56Q9D0R4 Gm5309-201ENSMUST00000197416 677 ntBASIC6.22□□□□□ -1.41
Ddx56Q9D0R4 Gm33619-201ENSMUST00000215633 662 ntTSL 2 BASIC6.22□□□□□ -1.41
Ddx56Q9D0R4 Tespa1-202ENSMUST00000217702 1102 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
Ddx56Q9D0R4 CT025616.1-201ENSMUST00000221158 412 ntBASIC6.22□□□□□ -1.41
Ddx56Q9D0R4 AC154635.1-201ENSMUST00000221433 400 ntTSL 3 BASIC6.22□□□□□ -1.41
Ddx56Q9D0R4 AC122465.3-201ENSMUST00000221644 355 ntBASIC6.22□□□□□ -1.41
Ddx56Q9D0R4 CT030166.1-201ENSMUST00000222654 357 ntBASIC6.22□□□□□ -1.41
Ddx56Q9D0R4 4933412O06Rik-201ENSMUST00000222681 1123 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
Ddx56Q9D0R4 Gm36607-201ENSMUST00000222750 1087 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
Ddx56Q9D0R4 AC156559.1-201ENSMUST00000224158 222 ntBASIC6.22□□□□□ -1.41
Ddx56Q9D0R4 AC154257.2-201ENSMUST00000224166 340 ntBASIC6.22□□□□□ -1.41
Ddx56Q9D0R4 CT010453.2-201ENSMUST00000227005 483 ntBASIC6.22□□□□□ -1.41
Ddx56Q9D0R4 1700028P14Rik-201ENSMUST00000035849 868 ntAPPRIS P1 TSL 1 (best) BASIC6.22□□□□□ -1.41
Ddx56Q9D0R4 Olfr486-201ENSMUST00000072035 945 ntAPPRIS P1 BASIC6.22□□□□□ -1.41
Ddx56Q9D0R4 Olfr469-201ENSMUST00000075704 945 ntAPPRIS P1 BASIC6.22□□□□□ -1.41
Ddx56Q9D0R4 Scgb1b2-201ENSMUST00000080635 424 ntAPPRIS P1 TSL 1 (best) BASIC6.22□□□□□ -1.41
Ddx56Q9D0R4 Olfr487-201ENSMUST00000081996 945 ntAPPRIS P1 BASIC6.22□□□□□ -1.41
Ddx56Q9D0R4 Olfr1181-201ENSMUST00000099823 936 ntAPPRIS P1 BASIC6.22□□□□□ -1.41
Ddx56Q9D0R4 AC155255.1-201ENSMUST00000218751 1428 ntTSL 5 BASIC6.22□□□□□ -1.41
Ddx56Q9D0R4 Clca1-201ENSMUST00000029919 3655 ntAPPRIS P1 TSL 1 (best) BASIC6.22□□□□□ -1.41
Ddx56Q9D0R4 CT025604.1-201ENSMUST00000221111 3436 ntBASIC6.22□□□□□ -1.41
Ddx56Q9D0R4 Pum2-204ENSMUST00000163569 3560 ntAPPRIS P3 TSL 1 (best) BASIC6.22□□□□□ -1.41
Ddx56Q9D0R4 Actrt1-201ENSMUST00000059466 1339 ntAPPRIS P1 BASIC6.22□□□□□ -1.41
Ddx56Q9D0R4 Gm29114-201ENSMUST00000187100 2508 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
Ddx56Q9D0R4 Gm21985-201ENSMUST00000141047 4532 ntAPPRIS P1 TSL 2 BASIC6.22□□□□□ -1.41
Ddx56Q9D0R4 Hmgn5-201ENSMUST00000033597 1934 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.41
Ddx56Q9D0R4 Fancd2-201ENSMUST00000036340 5512 ntAPPRIS P3 TSL 1 (best) BASIC6.21□□□□□ -1.41
Ddx56Q9D0R4 Gm37268-201ENSMUST00000192254 2614 ntBASIC6.21□□□□□ -1.41
Ddx56Q9D0R4 Fkbp15-202ENSMUST00000084528 3329 ntAPPRIS ALT2 TSL 1 (best) BASIC6.21□□□□□ -1.41
Ddx56Q9D0R4 Gm26740-202ENSMUST00000181532 1531 ntTSL 1 (best) BASIC6.21□□□□□ -1.42
Ddx56Q9D0R4 Nxt2-202ENSMUST00000112913 2538 ntTSL 3 BASIC6.21□□□□□ -1.42
Ddx56Q9D0R4 Il1rapl1-203ENSMUST00000113966 9133 ntAPPRIS P1 TSL 5 BASIC6.21□□□□□ -1.42
Ddx56Q9D0R4 Rnd3-201ENSMUST00000017288 2828 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.42
Ddx56Q9D0R4 Rhbdd1-202ENSMUST00000140020 3687 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.42
Ddx56Q9D0R4 Sspn-202ENSMUST00000111701 4512 ntTSL 3 BASIC6.21□□□□□ -1.42
Ddx56Q9D0R4 Gm25345-201ENSMUST00000104505 133 ntBASIC6.21□□□□□ -1.42
Ddx56Q9D0R4 Gm7146-201ENSMUST00000116079 739 ntBASIC6.21□□□□□ -1.42
Ddx56Q9D0R4 Mir1192-201ENSMUST00000116976 121 ntBASIC6.21□□□□□ -1.42
Ddx56Q9D0R4 Gm13835-201ENSMUST00000118459 685 ntBASIC6.21□□□□□ -1.42
Ddx56Q9D0R4 Gm7658-201ENSMUST00000119064 1124 ntBASIC6.21□□□□□ -1.42
Ddx56Q9D0R4 Gm11890-201ENSMUST00000119585 417 ntBASIC6.21□□□□□ -1.42
Ddx56Q9D0R4 Fam229b-202ENSMUST00000124941 721 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.42
Ddx56Q9D0R4 Prl2c5-202ENSMUST00000126540 971 ntAPPRIS ALT2 TSL 1 (best) BASIC6.21□□□□□ -1.42
Ddx56Q9D0R4 Pard3bos2-201ENSMUST00000127498 770 ntTSL 3 BASIC6.21□□□□□ -1.42
Ddx56Q9D0R4 Mipepos-201ENSMUST00000155855 610 ntTSL 3 BASIC6.21□□□□□ -1.42
Ddx56Q9D0R4 Gm25387-201ENSMUST00000157813 132 ntBASIC6.21□□□□□ -1.42
Ddx56Q9D0R4 Gm24741-201ENSMUST00000158857 106 ntBASIC6.21□□□□□ -1.42
Ddx56Q9D0R4 Gm2966-201ENSMUST00000166052 481 ntBASIC6.21□□□□□ -1.42
Ddx56Q9D0R4 Gm17204-201ENSMUST00000167936 478 ntBASIC6.21□□□□□ -1.42
Ddx56Q9D0R4 Gm8362-202ENSMUST00000170673 997 ntAPPRIS ALT2 TSL 5 BASIC6.21□□□□□ -1.42
Ddx56Q9D0R4 Fcf1-202ENSMUST00000171040 731 ntTSL 3 BASIC6.21□□□□□ -1.42
Ddx56Q9D0R4 Znrd1-203ENSMUST00000172823 454 ntTSL 5 BASIC6.21□□□□□ -1.42
Ddx56Q9D0R4 Tppp2-202ENSMUST00000177625 627 ntAPPRIS P1 TSL 3 BASIC6.21□□□□□ -1.42
Ddx56Q9D0R4 Gm29282-201ENSMUST00000190720 473 ntTSL 5 BASIC6.21□□□□□ -1.42
Ddx56Q9D0R4 7530428D23Rik-201ENSMUST00000191725 765 ntTSL 1 (best) BASIC6.21□□□□□ -1.42
Ddx56Q9D0R4 Ighv3-2-201ENSMUST00000191842 349 ntBASIC6.21□□□□□ -1.42
Ddx56Q9D0R4 Gm37177-201ENSMUST00000193768 417 ntBASIC6.21□□□□□ -1.42
Ddx56Q9D0R4 Gm42716-201ENSMUST00000196003 680 ntTSL 5 BASIC6.21□□□□□ -1.42
Ddx56Q9D0R4 Gm22897-201ENSMUST00000197860 128 ntBASIC6.21□□□□□ -1.42
Ddx56Q9D0R4 Gm43743-202ENSMUST00000198353 491 ntBASIC6.21□□□□□ -1.42
Ddx56Q9D0R4 Gm8930-201ENSMUST00000201693 768 ntBASIC6.21□□□□□ -1.42
Ddx56Q9D0R4 Gm36840-201ENSMUST00000202688 250 ntTSL 3 BASIC6.21□□□□□ -1.42
Ddx56Q9D0R4 Gm45722-201ENSMUST00000213075 466 ntBASIC6.21□□□□□ -1.42
Ddx56Q9D0R4 AL929265.1-201ENSMUST00000213427 125 ntBASIC6.21□□□□□ -1.42
Ddx56Q9D0R4 AC153845.2-203ENSMUST00000215889 617 ntTSL 3 BASIC6.21□□□□□ -1.42
Ddx56Q9D0R4 CAAA01125382.4-201ENSMUST00000217222 774 ntBASIC6.21□□□□□ -1.42
Ddx56Q9D0R4 Gm7530-201ENSMUST00000218466 605 ntBASIC6.21□□□□□ -1.42
Ddx56Q9D0R4 AC160030.1-201ENSMUST00000218916 506 ntTSL 2 BASIC6.21□□□□□ -1.42
Ddx56Q9D0R4 AC124732.4-201ENSMUST00000220930 1274 ntBASIC6.21□□□□□ -1.42
Ddx56Q9D0R4 AC154709.1-201ENSMUST00000222304 446 ntTSL 3 BASIC6.21□□□□□ -1.42
Ddx56Q9D0R4 AC154467.1-201ENSMUST00000227527 449 ntBASIC6.21□□□□□ -1.42
Ddx56Q9D0R4 4930522N08Rik-201ENSMUST00000031274 916 ntTSL 1 (best) BASIC6.21□□□□□ -1.42
Ddx56Q9D0R4 Olfr1356-201ENSMUST00000061289 963 ntAPPRIS P1 BASIC6.21□□□□□ -1.42
Ddx56Q9D0R4 Mmp12-202ENSMUST00000065079 1185 ntTSL 1 (best) BASIC6.21□□□□□ -1.42
Ddx56Q9D0R4 Gm23628-201ENSMUST00000082464 173 ntBASIC6.21□□□□□ -1.42
Ddx56Q9D0R4 Olfr1198-201ENSMUST00000099814 927 ntAPPRIS P1 BASIC6.21□□□□□ -1.42
Ddx56Q9D0R4 Herc1-201ENSMUST00000042824 15153 ntAPPRIS P1 TSL 5 BASIC6.21□□□□□ -1.42
Ddx56Q9D0R4 9330111N05Rik-201ENSMUST00000180409 1407 ntTSL 1 (best) BASIC6.21□□□□□ -1.42
Ddx56Q9D0R4 Atr-213ENSMUST00000215311 8102 ntAPPRIS P1 TSL 5 BASIC6.21□□□□□ -1.42
Ddx56Q9D0R4 Gm36936-201ENSMUST00000194508 2749 ntBASIC6.21□□□□□ -1.42
Ddx56Q9D0R4 4930563J15Rik-201ENSMUST00000218306 3468 ntBASIC6.21□□□□□ -1.42
Ddx56Q9D0R4 Zfp638-220ENSMUST00000204751 9033 ntAPPRIS P3 TSL 1 (best) BASIC6.21□□□□□ -1.42
Ddx56Q9D0R4 Gabra6-203ENSMUST00000155218 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC6.21□□□□□ -1.42
Ddx56Q9D0R4 Rnf24-201ENSMUST00000059372 5978 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.42
Ddx56Q9D0R4 Olfr1387-202ENSMUST00000214541 4840 ntAPPRIS P1 TSL 5 BASIC6.21□□□□□ -1.42
Ddx56Q9D0R4 Gm2366-201ENSMUST00000180753 3982 ntTSL 1 (best) BASIC6.21□□□□□ -1.42
Ddx56Q9D0R4 Gm43469-201ENSMUST00000196084 4634 ntBASIC6.21□□□□□ -1.42
Ddx56Q9D0R4 Scn2a-202ENSMUST00000100067 8690 ntAPPRIS P3 TSL 5 BASIC6.21□□□□□ -1.42
Ddx56Q9D0R4 Rsrc2-219ENSMUST00000182955 1685 ntTSL 5 BASIC6.2□□□□□ -1.42
Ddx56Q9D0R4 Ugt2b34-202ENSMUST00000113333 4312 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
Ddx56Q9D0R4 Sgip1-205ENSMUST00000106882 6061 ntAPPRIS ALT2 TSL 5 BASIC6.2□□□□□ -1.42
Ddx56Q9D0R4 Gm14391-204ENSMUST00000109058 1854 ntAPPRIS P1 TSL 3 BASIC6.2□□□□□ -1.42
Ddx56Q9D0R4 Gm45632-201ENSMUST00000211532 1888 ntBASIC6.2□□□□□ -1.42
Ddx56Q9D0R4 Psd3-205ENSMUST00000098696 11316 ntAPPRIS ALT2 TSL 1 (best) BASIC6.2□□□□□ -1.42
Ddx56Q9D0R4 Olfr823-202ENSMUST00000213145 1431 ntAPPRIS P1 TSL 5 BASIC6.2□□□□□ -1.42
Ddx56Q9D0R4 Gm22371-201ENSMUST00000104588 130 ntBASIC6.2□□□□□ -1.42
Ddx56Q9D0R4 Gm42674-201ENSMUST00000107330 446 ntAPPRIS P1 TSL 3 BASIC6.2□□□□□ -1.42
Ddx56Q9D0R4 Gm12099-201ENSMUST00000118660 750 ntBASIC6.2□□□□□ -1.42
Retrieved 100 of 76,532 protein–RNA pairs in 78.5 ms