Protein–RNA interactions for Protein: Q99PJ2

Trim8, Probable E3 ubiquitin-protein ligase TRIM8, mousemouse

Predictions only

Length 551 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim8Q99PJ2 Gm44097-201ENSMUST00000204112 563 ntTSL 3 BASIC5.91□□□□□ -1.46
Trim8Q99PJ2 Pttg1-202ENSMUST00000020687 741 ntAPPRIS P1 TSL 1 (best) BASIC5.91□□□□□ -1.46
Trim8Q99PJ2 Zfp78-206ENSMUST00000208390 2965 ntAPPRIS ALT2 TSL 1 (best) BASIC5.91□□□□□ -1.46
Trim8Q99PJ2 9430099M06Rik-201ENSMUST00000210409 742 ntBASIC5.91□□□□□ -1.46
Trim8Q99PJ2 Gm5339-201ENSMUST00000210551 1102 ntBASIC5.91□□□□□ -1.46
Trim8Q99PJ2 5430437J10Rik-201ENSMUST00000211750 1234 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
Trim8Q99PJ2 Gm19137-201ENSMUST00000213790 1164 ntBASIC5.91□□□□□ -1.46
Trim8Q99PJ2 AC154296.3-201ENSMUST00000214427 712 ntBASIC5.91□□□□□ -1.46
Trim8Q99PJ2 Prl7d1-201ENSMUST00000021776 993 ntAPPRIS ALT2 TSL 1 (best) BASIC5.91□□□□□ -1.46
Trim8Q99PJ2 Nkain2-204ENSMUST00000218645 703 ntTSL 5 BASIC5.91□□□□□ -1.46
Trim8Q99PJ2 AC124601.1-201ENSMUST00000220531 135 ntBASIC5.91□□□□□ -1.46
Trim8Q99PJ2 AC154635.1-201ENSMUST00000221433 400 ntTSL 3 BASIC5.91□□□□□ -1.46
Trim8Q99PJ2 Gm2614-201ENSMUST00000223227 403 ntBASIC5.91□□□□□ -1.46
Trim8Q99PJ2 AC133203.1-201ENSMUST00000228241 301 ntBASIC5.91□□□□□ -1.46
Trim8Q99PJ2 AC135086.1-201ENSMUST00000228621 817 ntBASIC5.91□□□□□ -1.46
Trim8Q99PJ2 Cypt1-201ENSMUST00000024026 672 ntAPPRIS P3 TSL 1 (best) BASIC5.91□□□□□ -1.46
Trim8Q99PJ2 1700014D04Rik-201ENSMUST00000055343 795 ntBASIC5.91□□□□□ -1.46
Trim8Q99PJ2 Mup20-201ENSMUST00000074018 928 ntAPPRIS P1 TSL 1 (best) BASIC5.91□□□□□ -1.46
Trim8Q99PJ2 Gm22043-201ENSMUST00000082993 158 ntBASIC5.91□□□□□ -1.46
Trim8Q99PJ2 Mup18-201ENSMUST00000098040 930 ntAPPRIS P1 TSL 1 (best) BASIC5.91□□□□□ -1.46
Trim8Q99PJ2 Mup11-202ENSMUST00000098046 930 ntAPPRIS P1 TSL 1 (best) BASIC5.91□□□□□ -1.46
Trim8Q99PJ2 Mup10-201ENSMUST00000098047 927 ntAPPRIS P1 TSL 2 BASIC5.91□□□□□ -1.46
Trim8Q99PJ2 Gm44288-201ENSMUST00000205061 2795 ntBASIC5.91□□□□□ -1.46
Trim8Q99PJ2 Esp3-201ENSMUST00000177574 1316 ntAPPRIS P1 TSL 1 (best) BASIC5.91□□□□□ -1.46
Trim8Q99PJ2 Gm43613-201ENSMUST00000199409 1613 ntBASIC5.91□□□□□ -1.46
Trim8Q99PJ2 AC127371.2-201ENSMUST00000228108 1933 ntBASIC5.91□□□□□ -1.46
Trim8Q99PJ2 Ugt2b34-202ENSMUST00000113333 4312 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
Trim8Q99PJ2 Olfr446-202ENSMUST00000215369 4399 ntAPPRIS P1 TSL 5 BASIC5.91□□□□□ -1.46
Trim8Q99PJ2 Gm7648-201ENSMUST00000173036 1658 ntBASIC5.91□□□□□ -1.46
Trim8Q99PJ2 Gm43826-201ENSMUST00000199604 2612 ntBASIC5.91□□□□□ -1.46
Trim8Q99PJ2 Tmem156-204ENSMUST00000212080 1411 ntAPPRIS P5 TSL 5 BASIC5.91□□□□□ -1.46
Trim8Q99PJ2 Slc22a29-205ENSMUST00000222533 1473 ntTSL 5 BASIC5.9□□□□□ -1.46
Trim8Q99PJ2 Ipo5-201ENSMUST00000032898 4518 ntAPPRIS P1 TSL 1 (best) BASIC5.9□□□□□ -1.46
Trim8Q99PJ2 Gm5583-201ENSMUST00000174328 1519 ntBASIC5.9□□□□□ -1.46
Trim8Q99PJ2 Olfr1474-203ENSMUST00000220113 1539 ntAPPRIS P1 TSL 5 BASIC5.9□□□□□ -1.46
Trim8Q99PJ2 Gm11516-201ENSMUST00000118450 1582 ntBASIC5.9□□□□□ -1.46
Trim8Q99PJ2 Olfr1263-202ENSMUST00000214382 4400 ntAPPRIS P1 TSL 5 BASIC5.9□□□□□ -1.46
Trim8Q99PJ2 Homer2-202ENSMUST00000098326 10982 ntTSL 5 BASIC5.9□□□□□ -1.46
Trim8Q99PJ2 Kat6b-ps1-201ENSMUST00000187624 3433 ntBASIC5.9□□□□□ -1.46
Trim8Q99PJ2 Trbv13-2-201ENSMUST00000103270 340 ntAPPRIS P1 BASIC5.9□□□□□ -1.46
Trim8Q99PJ2 Gm25564-201ENSMUST00000104604 132 ntBASIC5.9□□□□□ -1.46
Trim8Q99PJ2 Gm14403-202ENSMUST00000108947 1209 ntAPPRIS P1 TSL 5 BASIC5.9□□□□□ -1.46
Trim8Q99PJ2 2010106E10Rik-202ENSMUST00000113412 1276 ntAPPRIS P1 TSL 1 (best) BASIC5.9□□□□□ -1.46
Trim8Q99PJ2 Eif3s6-ps1-201ENSMUST00000117907 470 ntBASIC5.9□□□□□ -1.46
Trim8Q99PJ2 Gm15090-201ENSMUST00000118787 1196 ntBASIC5.9□□□□□ -1.46
Trim8Q99PJ2 Olfr1004-ps1-201ENSMUST00000120361 580 ntBASIC5.9□□□□□ -1.46
Trim8Q99PJ2 Gm11472-201ENSMUST00000121305 556 ntBASIC5.9□□□□□ -1.46
Trim8Q99PJ2 Gm15089-201ENSMUST00000122332 1196 ntBASIC5.9□□□□□ -1.46
Trim8Q99PJ2 Gm8648-201ENSMUST00000122457 221 ntBASIC5.9□□□□□ -1.46
Trim8Q99PJ2 Fam229b-202ENSMUST00000124941 721 ntAPPRIS P1 TSL 1 (best) BASIC5.9□□□□□ -1.46
Trim8Q99PJ2 Gm13838-201ENSMUST00000132130 531 ntTSL 5 BASIC5.9□□□□□ -1.46
Trim8Q99PJ2 Gm12603-202ENSMUST00000146678 618 ntTSL 1 (best) BASIC5.9□□□□□ -1.46
Trim8Q99PJ2 Gm14747-201ENSMUST00000149888 984 ntBASIC5.9□□□□□ -1.46
Trim8Q99PJ2 1700042G15Rik-203ENSMUST00000152001 583 ntTSL 1 (best) BASIC5.9□□□□□ -1.46
Trim8Q99PJ2 Gm23205-201ENSMUST00000158671 103 ntBASIC5.9□□□□□ -1.46
Trim8Q99PJ2 Eif3s6-ps2-201ENSMUST00000163304 219 ntBASIC5.9□□□□□ -1.46
Trim8Q99PJ2 Gm17655-201ENSMUST00000167969 255 ntBASIC5.9□□□□□ -1.46
Trim8Q99PJ2 Gm17121-201ENSMUST00000170414 847 ntBASIC5.9□□□□□ -1.46
Trim8Q99PJ2 Obox1-202ENSMUST00000172463 783 ntAPPRIS P1 TSL 3 BASIC5.9□□□□□ -1.46
Trim8Q99PJ2 Vmn2r-ps84-201ENSMUST00000173377 897 ntBASIC5.9□□□□□ -1.46
Trim8Q99PJ2 Gm21244-201ENSMUST00000178447 684 ntAPPRIS P1 BASIC5.9□□□□□ -1.46
Trim8Q99PJ2 Gm17222-201ENSMUST00000180135 847 ntBASIC5.9□□□□□ -1.46
Trim8Q99PJ2 4930445N18Rik-201ENSMUST00000180631 886 ntTSL 1 (best) BASIC5.9□□□□□ -1.46
Trim8Q99PJ2 Gm26968-201ENSMUST00000182894 481 ntBASIC5.9□□□□□ -1.46
Trim8Q99PJ2 Gm8151-201ENSMUST00000184817 871 ntBASIC5.9□□□□□ -1.46
Trim8Q99PJ2 Gm8367-201ENSMUST00000186145 887 ntBASIC5.9□□□□□ -1.46
Trim8Q99PJ2 Gm28156-201ENSMUST00000187880 1136 ntTSL 5 BASIC5.9□□□□□ -1.46
Trim8Q99PJ2 Gm29111-201ENSMUST00000188823 696 ntBASIC5.9□□□□□ -1.46
Trim8Q99PJ2 Gm28986-201ENSMUST00000189682 678 ntTSL 5 BASIC5.9□□□□□ -1.46
Trim8Q99PJ2 Gm28584-201ENSMUST00000191489 696 ntBASIC5.9□□□□□ -1.46
Trim8Q99PJ2 Gm37059-201ENSMUST00000191723 678 ntTSL 5 BASIC5.9□□□□□ -1.46
Trim8Q99PJ2 Gm37784-201ENSMUST00000193233 189 ntBASIC5.9□□□□□ -1.46
Trim8Q99PJ2 Gm38138-201ENSMUST00000193274 696 ntBASIC5.9□□□□□ -1.46
Trim8Q99PJ2 Gm37187-201ENSMUST00000193425 341 ntBASIC5.9□□□□□ -1.46
Trim8Q99PJ2 Gm37758-201ENSMUST00000194275 629 ntBASIC5.9□□□□□ -1.46
Trim8Q99PJ2 Gm42707-201ENSMUST00000196620 322 ntTSL 5 BASIC5.9□□□□□ -1.46
Trim8Q99PJ2 AI506816-203ENSMUST00000198461 503 ntTSL 5 BASIC5.9□□□□□ -1.46
Trim8Q99PJ2 Gm18689-201ENSMUST00000203969 902 ntBASIC5.9□□□□□ -1.46
Trim8Q99PJ2 Gm44212-201ENSMUST00000205016 897 ntBASIC5.9□□□□□ -1.46
Trim8Q99PJ2 Snhg1-211ENSMUST00000206155 605 ntTSL 1 (best) BASIC5.9□□□□□ -1.46
Trim8Q99PJ2 Gm39119-201ENSMUST00000208466 951 ntTSL 5 BASIC5.9□□□□□ -1.46
Trim8Q99PJ2 Olfr490-201ENSMUST00000210114 945 ntAPPRIS P1 BASIC5.9□□□□□ -1.46
Trim8Q99PJ2 Gm35453-201ENSMUST00000210304 331 ntTSL 3 BASIC5.9□□□□□ -1.46
Trim8Q99PJ2 Gm17911-201ENSMUST00000210806 877 ntBASIC5.9□□□□□ -1.46
Trim8Q99PJ2 Gm33838-201ENSMUST00000214038 786 ntTSL 5 BASIC5.9□□□□□ -1.46
Trim8Q99PJ2 1700019C18Rik-202ENSMUST00000221688 1047 ntTSL 5 BASIC5.9□□□□□ -1.46
Trim8Q99PJ2 9130015A21Rik-202ENSMUST00000222153 837 ntTSL 1 (best) BASIC5.9□□□□□ -1.46
Trim8Q99PJ2 Gm41002-201ENSMUST00000222479 312 ntTSL 3 BASIC5.9□□□□□ -1.46
Trim8Q99PJ2 Gm18940-201ENSMUST00000222518 871 ntBASIC5.9□□□□□ -1.46
Trim8Q99PJ2 AC160114.2-201ENSMUST00000223021 300 ntBASIC5.9□□□□□ -1.46
Trim8Q99PJ2 AC123665.3-201ENSMUST00000228735 1216 ntBASIC5.9□□□□□ -1.46
Trim8Q99PJ2 CT025525.3-201ENSMUST00000228858 366 ntBASIC5.9□□□□□ -1.46
Trim8Q99PJ2 Cd200r3-201ENSMUST00000048479 986 ntAPPRIS ALT2 TSL 1 (best) BASIC5.9□□□□□ -1.46
Trim8Q99PJ2 C2cd6b-201ENSMUST00000054653 878 ntTSL 1 (best) BASIC5.9□□□□□ -1.46
Trim8Q99PJ2 Krtap31-2-201ENSMUST00000058761 935 ntAPPRIS P1 BASIC5.9□□□□□ -1.46
Trim8Q99PJ2 Olfr675-201ENSMUST00000073102 942 ntAPPRIS P1 BASIC5.9□□□□□ -1.46
Trim8Q99PJ2 Krtap6-1-201ENSMUST00000076906 594 ntAPPRIS P1 BASIC5.9□□□□□ -1.46
Trim8Q99PJ2 Olfr376-201ENSMUST00000078952 1210 ntAPPRIS ALT2 TSL 2 BASIC5.9□□□□□ -1.46
Trim8Q99PJ2 H2-M9-201ENSMUST00000087165 1125 ntTSL 1 (best) BASIC5.9□□□□□ -1.46
Trim8Q99PJ2 Olfr652-201ENSMUST00000098175 1061 ntAPPRIS P1 BASIC5.9□□□□□ -1.46
Retrieved 100 of 76,532 protein–RNA pairs in 61.2 ms