Protein–RNA interactions for Protein: Q99MT2

Msh4, MutS protein homolog 4, mousemouse

Predictions only

Length 958 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Msh4Q99MT2 Gm14229-201ENSMUST00000121178 850 ntBASIC5.48□□□□□ -1.53
Msh4Q99MT2 Gm12670-201ENSMUST00000123606 576 ntTSL 2 BASIC5.48□□□□□ -1.53
Msh4Q99MT2 Gm12092-201ENSMUST00000125194 600 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
Msh4Q99MT2 Gm16126-201ENSMUST00000126025 589 ntTSL 3 BASIC5.48□□□□□ -1.53
Msh4Q99MT2 Gm14808-201ENSMUST00000129259 361 ntTSL 3 BASIC5.48□□□□□ -1.53
Msh4Q99MT2 Tmem216-205ENSMUST00000145210 774 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
Msh4Q99MT2 Gm22339-201ENSMUST00000157718 62 ntBASIC5.48□□□□□ -1.53
Msh4Q99MT2 Gm25048-201ENSMUST00000158598 91 ntBASIC5.48□□□□□ -1.53
Msh4Q99MT2 Glipr1-204ENSMUST00000162508 1183 ntAPPRIS P1 TSL 5 BASIC5.48□□□□□ -1.53
Msh4Q99MT2 Gm17024-201ENSMUST00000165676 634 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
Msh4Q99MT2 Nup205-202ENSMUST00000170234 1120 ntTSL 5 BASIC5.48□□□□□ -1.53
Msh4Q99MT2 Naa60-210ENSMUST00000176224 501 ntTSL 5 BASIC5.48□□□□□ -1.53
Msh4Q99MT2 Vmn2r-ps126-201ENSMUST00000176711 1149 ntBASIC5.48□□□□□ -1.53
Msh4Q99MT2 Gm9602-202ENSMUST00000177973 615 ntAPPRIS ALT2 TSL 5 BASIC5.48□□□□□ -1.53
Msh4Q99MT2 Gm22111-201ENSMUST00000178010 79 ntBASIC5.48□□□□□ -1.53
Msh4Q99MT2 Gm23687-201ENSMUST00000178664 79 ntBASIC5.48□□□□□ -1.53
Msh4Q99MT2 Gm24566-201ENSMUST00000179286 79 ntBASIC5.48□□□□□ -1.53
Msh4Q99MT2 Gm23305-201ENSMUST00000179342 79 ntBASIC5.48□□□□□ -1.53
Msh4Q99MT2 Gm26389-201ENSMUST00000179819 79 ntBASIC5.48□□□□□ -1.53
Msh4Q99MT2 Gm22130-201ENSMUST00000179979 79 ntBASIC5.48□□□□□ -1.53
Msh4Q99MT2 Gm22393-201ENSMUST00000180153 79 ntBASIC5.48□□□□□ -1.53
Msh4Q99MT2 Gm25085-201ENSMUST00000180298 79 ntBASIC5.48□□□□□ -1.53
Msh4Q99MT2 Gm28706-201ENSMUST00000186830 355 ntTSL 2 BASIC5.48□□□□□ -1.53
Msh4Q99MT2 Gm28640-201ENSMUST00000190918 550 ntBASIC5.48□□□□□ -1.53
Msh4Q99MT2 Ighv5-19-201ENSMUST00000193466 297 ntBASIC5.48□□□□□ -1.53
Msh4Q99MT2 Gm5110-201ENSMUST00000203122 1063 ntBASIC5.48□□□□□ -1.53
Msh4Q99MT2 Gm34149-201ENSMUST00000203547 304 ntBASIC5.48□□□□□ -1.53
Msh4Q99MT2 Gm44088-201ENSMUST00000204595 237 ntBASIC5.48□□□□□ -1.53
Msh4Q99MT2 Gm44997-202ENSMUST00000205970 425 ntTSL 3 BASIC5.48□□□□□ -1.53
Msh4Q99MT2 Gm44972-201ENSMUST00000206419 406 ntBASIC5.48□□□□□ -1.53
Msh4Q99MT2 AC140409.4-201ENSMUST00000215757 538 ntBASIC5.48□□□□□ -1.53
Msh4Q99MT2 Gm7042-201ENSMUST00000223027 384 ntBASIC5.48□□□□□ -1.53
Msh4Q99MT2 AC168056.2-201ENSMUST00000223591 269 ntBASIC5.48□□□□□ -1.53
Msh4Q99MT2 AC141425.1-201ENSMUST00000224989 265 ntBASIC5.48□□□□□ -1.53
Msh4Q99MT2 AC165092.4-201ENSMUST00000225025 679 ntBASIC5.48□□□□□ -1.53
Msh4Q99MT2 AC107711.2-203ENSMUST00000227827 762 ntBASIC5.48□□□□□ -1.53
Msh4Q99MT2 AC166574.7-201ENSMUST00000228502 704 ntBASIC5.48□□□□□ -1.53
Msh4Q99MT2 Mlip-201ENSMUST00000034910 1227 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
Msh4Q99MT2 Gm15421-201ENSMUST00000051985 443 ntTSL 3 BASIC5.48□□□□□ -1.53
Msh4Q99MT2 Olfr816-201ENSMUST00000071605 939 ntAPPRIS P1 BASIC5.48□□□□□ -1.53
Msh4Q99MT2 Defa26-201ENSMUST00000074343 372 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
Msh4Q99MT2 Gm26072-201ENSMUST00000083135 107 ntBASIC5.48□□□□□ -1.53
Msh4Q99MT2 Mir350-201ENSMUST00000083639 99 ntBASIC5.48□□□□□ -1.53
Msh4Q99MT2 Olfr661-201ENSMUST00000098168 964 ntAPPRIS P1 BASIC5.48□□□□□ -1.53
Msh4Q99MT2 Olfr1016-201ENSMUST00000099915 930 ntAPPRIS P1 BASIC5.48□□□□□ -1.53
Msh4Q99MT2 Lrp2bp-203ENSMUST00000110381 3421 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
Msh4Q99MT2 Capn13-201ENSMUST00000095208 2614 ntAPPRIS P1 TSL 5 BASIC5.48□□□□□ -1.53
Msh4Q99MT2 Olfr1056-202ENSMUST00000216547 2213 ntAPPRIS P1 TSL 5 BASIC5.48□□□□□ -1.53
Msh4Q99MT2 Ubtfl1-203ENSMUST00000169398 4430 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
Msh4Q99MT2 Chd9-202ENSMUST00000109614 11565 ntAPPRIS ALT2 TSL 5 BASIC5.48□□□□□ -1.53
Msh4Q99MT2 Fat2-201ENSMUST00000068853 14528 ntAPPRIS P1 TSL 5 BASIC5.48□□□□□ -1.53
Msh4Q99MT2 Vmn2r-ps38-201ENSMUST00000173752 2573 ntBASIC5.48□□□□□ -1.53
Msh4Q99MT2 Gm17275-201ENSMUST00000181811 2550 ntTSL 5 BASIC5.48□□□□□ -1.53
Msh4Q99MT2 Gm8853-201ENSMUST00000198366 1344 ntBASIC5.48□□□□□ -1.53
Msh4Q99MT2 Olfr104-ps-201ENSMUST00000178766 1972 ntAPPRIS ALT2 TSL 5 BASIC5.47□□□□□ -1.53
Msh4Q99MT2 Lama2-207ENSMUST00000189575 4244 ntTSL 5 BASIC5.47□□□□□ -1.53
Msh4Q99MT2 Slc22a26-202ENSMUST00000120522 2854 ntAPPRIS ALT2 TSL 1 (best) BASIC5.47□□□□□ -1.53
Msh4Q99MT2 Zfp455-201ENSMUST00000117110 2556 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
Msh4Q99MT2 Gm13090-201ENSMUST00000105667 746 ntAPPRIS P1 TSL 3 BASIC5.47□□□□□ -1.53
Msh4Q99MT2 Defa-ps11-201ENSMUST00000119719 299 ntBASIC5.47□□□□□ -1.53
Msh4Q99MT2 Gm11510-201ENSMUST00000120278 347 ntBASIC5.47□□□□□ -1.53
Msh4Q99MT2 Gm12041-201ENSMUST00000121606 602 ntBASIC5.47□□□□□ -1.53
Msh4Q99MT2 Olfr118-201ENSMUST00000122036 966 ntAPPRIS P1 BASIC5.47□□□□□ -1.53
Msh4Q99MT2 Gm12082-201ENSMUST00000138164 600 ntTSL 3 BASIC5.47□□□□□ -1.53
Msh4Q99MT2 Gm12259-201ENSMUST00000138391 328 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
Msh4Q99MT2 Lce6a-201ENSMUST00000138403 795 ntAPPRIS P1 TSL 5 BASIC5.47□□□□□ -1.53
Msh4Q99MT2 Fundc1-203ENSMUST00000142638 597 ntTSL 3 BASIC5.47□□□□□ -1.53
Msh4Q99MT2 Gm11716-201ENSMUST00000154414 470 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
Msh4Q99MT2 4933417A18Rik-201ENSMUST00000160279 1045 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
Msh4Q99MT2 Gm9006-201ENSMUST00000165520 841 ntBASIC5.47□□□□□ -1.53
Msh4Q99MT2 Vmn1r9-201ENSMUST00000171186 1051 ntAPPRIS P1 BASIC5.47□□□□□ -1.53
Msh4Q99MT2 Ctla2b-202ENSMUST00000171347 1094 ntAPPRIS ALT2 TSL 1 (best) BASIC5.47□□□□□ -1.53
Msh4Q99MT2 Mir3097-201ENSMUST00000175356 67 ntBASIC5.47□□□□□ -1.53
Msh4Q99MT2 Gm2877-201ENSMUST00000178248 1204 ntBASIC5.47□□□□□ -1.53
Msh4Q99MT2 Gm8324-201ENSMUST00000178911 1204 ntBASIC5.47□□□□□ -1.53
Msh4Q99MT2 Gm4665-201ENSMUST00000183244 561 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
Msh4Q99MT2 Gm27636-201ENSMUST00000184528 122 ntBASIC5.47□□□□□ -1.53
Msh4Q99MT2 1700108F19Rik-201ENSMUST00000185213 621 ntTSL 3 BASIC5.47□□□□□ -1.53
Msh4Q99MT2 Olfr1246-201ENSMUST00000187990 1078 ntAPPRIS P1 BASIC5.47□□□□□ -1.53
Msh4Q99MT2 Gm21654-201ENSMUST00000188086 691 ntBASIC5.47□□□□□ -1.53
Msh4Q99MT2 Gm29527-201ENSMUST00000190722 622 ntTSL 5 BASIC5.47□□□□□ -1.53
Msh4Q99MT2 Gm37581-201ENSMUST00000192371 988 ntBASIC5.47□□□□□ -1.53
Msh4Q99MT2 Gm38185-201ENSMUST00000193195 694 ntBASIC5.47□□□□□ -1.53
Msh4Q99MT2 Gm37533-201ENSMUST00000193848 545 ntBASIC5.47□□□□□ -1.53
Msh4Q99MT2 Gm38360-201ENSMUST00000195130 454 ntBASIC5.47□□□□□ -1.53
Msh4Q99MT2 Gm6145-203ENSMUST00000210557 835 ntTSL 5 BASIC5.47□□□□□ -1.53
Msh4Q99MT2 Nxpe1-ps-203ENSMUST00000210879 822 ntTSL 5 BASIC5.47□□□□□ -1.53
Msh4Q99MT2 Ifitm6-203ENSMUST00000211330 813 ntAPPRIS ALT2 TSL 2 BASIC5.47□□□□□ -1.53
Msh4Q99MT2 Olfr228-201ENSMUST00000216534 942 ntAPPRIS P1 BASIC5.47□□□□□ -1.53
Msh4Q99MT2 AC113204.1-202ENSMUST00000219846 578 ntTSL 3 BASIC5.47□□□□□ -1.53
Msh4Q99MT2 Gm16381-201ENSMUST00000220528 503 ntAPPRIS P1 BASIC5.47□□□□□ -1.53
Msh4Q99MT2 Gm2001-201ENSMUST00000223236 503 ntAPPRIS P1 BASIC5.47□□□□□ -1.53
Msh4Q99MT2 AC117797.1-201ENSMUST00000223977 695 ntBASIC5.47□□□□□ -1.53
Msh4Q99MT2 AC132833.3-201ENSMUST00000227472 866 ntBASIC5.47□□□□□ -1.53
Msh4Q99MT2 Otor-201ENSMUST00000028902 949 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
Msh4Q99MT2 Ceacam12-201ENSMUST00000032520 1056 ntAPPRIS P3 TSL 1 (best) BASIC5.47□□□□□ -1.53
Msh4Q99MT2 4931400O07Rik-201ENSMUST00000033537 647 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
Msh4Q99MT2 Agr3-201ENSMUST00000042101 826 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
Msh4Q99MT2 Olfr734-201ENSMUST00000050928 1033 ntAPPRIS P1 BASIC5.47□□□□□ -1.53
Msh4Q99MT2 Fam229b-201ENSMUST00000063204 745 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
Retrieved 100 of 76,532 protein–RNA pairs in 74.4 ms