Protein–RNA interactions for Protein: Q8CEC0

Nup88, Nuclear pore complex protein Nup88, mousemouse

Known RBP Predictions only

Length 753 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nup88Q8CEC0 Gm27153-201ENSMUST00000184492 407 ntTSL 2 BASIC6.29□□□□□ -1.4
Nup88Q8CEC0 Lockd-204ENSMUST00000184991 243 ntTSL 5 BASIC6.29□□□□□ -1.4
Nup88Q8CEC0 D530049I02Rik-201ENSMUST00000186582 562 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
Nup88Q8CEC0 1700003C15Rik-202ENSMUST00000188236 710 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
Nup88Q8CEC0 Gm28319-201ENSMUST00000189560 226 ntTSL 5 BASIC6.29□□□□□ -1.4
Nup88Q8CEC0 Gm43437-201ENSMUST00000198535 3955 ntBASIC6.29□□□□□ -1.4
Nup88Q8CEC0 Rrh-208ENSMUST00000200079 1106 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
Nup88Q8CEC0 Gm19596-201ENSMUST00000203685 739 ntBASIC6.29□□□□□ -1.4
Nup88Q8CEC0 Gm44516-201ENSMUST00000208794 833 ntTSL 5 BASIC6.29□□□□□ -1.4
Nup88Q8CEC0 AC183268.2-201ENSMUST00000214513 446 ntBASIC6.29□□□□□ -1.4
Nup88Q8CEC0 Gm36543-201ENSMUST00000217933 542 ntTSL 5 BASIC6.29□□□□□ -1.4
Nup88Q8CEC0 AC116589.3-201ENSMUST00000223034 1165 ntTSL 5 BASIC6.29□□□□□ -1.4
Nup88Q8CEC0 Olfr577-201ENSMUST00000051505 939 ntAPPRIS P1 BASIC6.29□□□□□ -1.4
Nup88Q8CEC0 Defb13-201ENSMUST00000060587 452 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
Nup88Q8CEC0 Mageb18-201ENSMUST00000088137 1571 ntAPPRIS P1 BASIC6.29□□□□□ -1.4
Nup88Q8CEC0 Olfr547-201ENSMUST00000098229 936 ntAPPRIS P1 BASIC6.29□□□□□ -1.4
Nup88Q8CEC0 Ktn1-216ENSMUST00000189533 3941 ntAPPRIS ALT2 TSL 5 BASIC6.29□□□□□ -1.4
Nup88Q8CEC0 Gm6645-201ENSMUST00000118505 2726 ntBASIC6.29□□□□□ -1.4
Nup88Q8CEC0 Vmn1r71-206ENSMUST00000228098 7165 ntAPPRIS P2 BASIC6.29□□□□□ -1.4
Nup88Q8CEC0 Rbm46-202ENSMUST00000182637 2058 ntTSL 5 BASIC6.29□□□□□ -1.4
Nup88Q8CEC0 Gm14399-204ENSMUST00000109060 1911 ntAPPRIS P1 TSL 3 BASIC6.29□□□□□ -1.4
Nup88Q8CEC0 Gm45819-201ENSMUST00000210940 1751 ntBASIC6.29□□□□□ -1.4
Nup88Q8CEC0 Gm37541-201ENSMUST00000192464 2315 ntBASIC6.28□□□□□ -1.4
Nup88Q8CEC0 Olfr78-201ENSMUST00000060187 3410 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
Nup88Q8CEC0 Gm43027-201ENSMUST00000202906 3691 ntBASIC6.28□□□□□ -1.4
Nup88Q8CEC0 Vmn1r185-209ENSMUST00000228133 5749 ntAPPRIS P1 BASIC6.28□□□□□ -1.4
Nup88Q8CEC0 Zfp607a-203ENSMUST00000205715 4031 ntAPPRIS P1 TSL 5 BASIC6.28□□□□□ -1.4
Nup88Q8CEC0 Olfr1457-203ENSMUST00000214561 1829 ntTSL 5 BASIC6.28□□□□□ -1.4
Nup88Q8CEC0 3110099E03Rik-202ENSMUST00000134580 2644 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
Nup88Q8CEC0 Cldn34b4-201ENSMUST00000101419 1103 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
Nup88Q8CEC0 Igkv4-92-201ENSMUST00000103332 351 ntAPPRIS P1 BASIC6.28□□□□□ -1.4
Nup88Q8CEC0 Cep112-203ENSMUST00000106718 839 ntTSL 5 BASIC6.28□□□□□ -1.4
Nup88Q8CEC0 Cetn2-202ENSMUST00000114550 1124 ntTSL 3 BASIC6.28□□□□□ -1.4
Nup88Q8CEC0 Gm14756-201ENSMUST00000116395 240 ntBASIC6.28□□□□□ -1.4
Nup88Q8CEC0 Gm6884-201ENSMUST00000119318 615 ntBASIC6.28□□□□□ -1.4
Nup88Q8CEC0 Gm6027-201ENSMUST00000121467 756 ntBASIC6.28□□□□□ -1.4
Nup88Q8CEC0 Gm23883-201ENSMUST00000122686 290 ntBASIC6.28□□□□□ -1.4
Nup88Q8CEC0 1700016G14Rik-201ENSMUST00000136906 863 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
Nup88Q8CEC0 A630023P12Rik-204ENSMUST00000142879 524 ntTSL 3 BASIC6.28□□□□□ -1.4
Nup88Q8CEC0 Gm15892-201ENSMUST00000152627 439 ntTSL 2 BASIC6.28□□□□□ -1.4
Nup88Q8CEC0 Gm6542-201ENSMUST00000153606 772 ntBASIC6.28□□□□□ -1.4
Nup88Q8CEC0 Gm23115-201ENSMUST00000158480 108 ntBASIC6.28□□□□□ -1.4
Nup88Q8CEC0 Gm16107-201ENSMUST00000162523 862 ntBASIC6.28□□□□□ -1.4
Nup88Q8CEC0 Vmn2r-ps66-201ENSMUST00000173203 1256 ntBASIC6.28□□□□□ -1.4
Nup88Q8CEC0 Obox4-ps11-201ENSMUST00000176150 724 ntBASIC6.28□□□□□ -1.4
Nup88Q8CEC0 Gm6260-202ENSMUST00000197170 921 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
Nup88Q8CEC0 Gm44993-201ENSMUST00000208435 842 ntTSL 3 BASIC6.28□□□□□ -1.4
Nup88Q8CEC0 Gm34272-201ENSMUST00000208886 253 ntBASIC6.28□□□□□ -1.4
Nup88Q8CEC0 AC192088.3-201ENSMUST00000227858 831 ntBASIC6.28□□□□□ -1.4
Nup88Q8CEC0 Cetn2-201ENSMUST00000033713 1026 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
Nup88Q8CEC0 Mbd3l1-201ENSMUST00000069218 850 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
Nup88Q8CEC0 Plac1-201ENSMUST00000074861 1041 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
Nup88Q8CEC0 Klk1b9-201ENSMUST00000081399 870 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
Nup88Q8CEC0 Cd226-202ENSMUST00000097496 911 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
Nup88Q8CEC0 Zfy1-202ENSMUST00000189888 2864 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
Nup88Q8CEC0 Gm3896-201ENSMUST00000176020 4094 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
Nup88Q8CEC0 Lrrc9-206ENSMUST00000162159 4739 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
Nup88Q8CEC0 Zfp101-201ENSMUST00000167107 2735 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
Nup88Q8CEC0 Olfr1238-203ENSMUST00000217237 5761 ntAPPRIS P1 TSL 5 BASIC6.28□□□□□ -1.4
Nup88Q8CEC0 Gm1720-201ENSMUST00000135086 1503 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
Nup88Q8CEC0 Gm19950-204ENSMUST00000208167 4196 ntTSL 5 BASIC6.28□□□□□ -1.4
Nup88Q8CEC0 Gm6853-202ENSMUST00000211360 4375 ntTSL 5 BASIC6.28□□□□□ -1.4
Nup88Q8CEC0 Iqch-203ENSMUST00000163624 3339 ntAPPRIS ALT2 TSL 1 (best) BASIC6.28□□□□□ -1.4
Nup88Q8CEC0 Olfr1166-201ENSMUST00000099833 1628 ntAPPRIS P1 BASIC6.28□□□□□ -1.4
Nup88Q8CEC0 Gm37738-201ENSMUST00000192396 4716 ntBASIC6.28□□□□□ -1.4
Nup88Q8CEC0 Catsperg1-212ENSMUST00000169143 3670 ntAPPRIS P1 TSL 5 BASIC6.28□□□□□ -1.4
Nup88Q8CEC0 Kcnh7-201ENSMUST00000075052 13321 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
Nup88Q8CEC0 Atf2-207ENSMUST00000112017 2396 ntAPPRIS P1 TSL 5 BASIC6.28□□□□□ -1.4
Nup88Q8CEC0 Olfr733-202ENSMUST00000214372 3530 ntAPPRIS P1 TSL 5 BASIC6.28□□□□□ -1.4
Nup88Q8CEC0 Samd3-202ENSMUST00000164660 2620 ntAPPRIS ALT2 TSL 1 (best) BASIC6.28□□□□□ -1.4
Nup88Q8CEC0 Samd3-203ENSMUST00000218301 2620 ntAPPRIS ALT2 TSL 1 (best) BASIC6.28□□□□□ -1.4
Nup88Q8CEC0 Vmn1r175-202ENSMUST00000228383 2878 ntAPPRIS P1 BASIC6.28□□□□□ -1.4
Nup88Q8CEC0 Tinag-201ENSMUST00000034911 1726 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
Nup88Q8CEC0 Lingo2-203ENSMUST00000108122 3362 ntAPPRIS P1 TSL 1 (best) BASIC6.27□□□□□ -1.4
Nup88Q8CEC0 Gm37779-201ENSMUST00000194221 3380 ntBASIC6.27□□□□□ -1.4
Nup88Q8CEC0 Impg1-201ENSMUST00000085289 3356 ntAPPRIS ALT2 TSL 5 BASIC6.27□□□□□ -1.4
Nup88Q8CEC0 Olfr510-204ENSMUST00000217170 2997 ntAPPRIS P1 TSL 5 BASIC6.27□□□□□ -1.41
Nup88Q8CEC0 Gm13089-201ENSMUST00000073532 1807 ntAPPRIS P1 TSL 1 (best) BASIC6.27□□□□□ -1.41
Nup88Q8CEC0 Olfr1252-202ENSMUST00000213196 3331 ntAPPRIS P1 TSL 5 BASIC6.27□□□□□ -1.41
Nup88Q8CEC0 Cul3-202ENSMUST00000164108 2442 ntTSL 5 BASIC6.27□□□□□ -1.41
Nup88Q8CEC0 S100pbp-201ENSMUST00000049081 2769 ntAPPRIS P1 TSL 1 (best) BASIC6.27□□□□□ -1.41
Nup88Q8CEC0 Gm43588-201ENSMUST00000201862 2298 ntBASIC6.27□□□□□ -1.41
Nup88Q8CEC0 Zscan4-ps2-201ENSMUST00000091440 2277 ntAPPRIS P1 TSL 1 (best) BASIC6.27□□□□□ -1.41
Nup88Q8CEC0 Cept1-201ENSMUST00000039153 2020 ntAPPRIS ALT1 TSL 1 (best) BASIC6.27□□□□□ -1.41
Nup88Q8CEC0 Gm14988-201ENSMUST00000117224 1548 ntBASIC6.27□□□□□ -1.41
Nup88Q8CEC0 Bclaf1-201ENSMUST00000043881 5437 ntAPPRIS ALT2 TSL 1 (best) BASIC6.27□□□□□ -1.41
Nup88Q8CEC0 Glrb-202ENSMUST00000107743 1101 ntTSL 5 BASIC6.27□□□□□ -1.41
Nup88Q8CEC0 Gm23229-201ENSMUST00000157297 105 ntBASIC6.27□□□□□ -1.41
Nup88Q8CEC0 Gm26350-201ENSMUST00000157531 288 ntBASIC6.27□□□□□ -1.41
Nup88Q8CEC0 Gm8358-201ENSMUST00000167222 555 ntBASIC6.27□□□□□ -1.41
Nup88Q8CEC0 Gm20523-201ENSMUST00000174340 1124 ntBASIC6.27□□□□□ -1.41
Nup88Q8CEC0 Gm23799-201ENSMUST00000175559 120 ntBASIC6.27□□□□□ -1.41
Nup88Q8CEC0 Vmn1r-ps21-201ENSMUST00000176891 925 ntBASIC6.27□□□□□ -1.41
Nup88Q8CEC0 Gm21915-201ENSMUST00000177787 402 ntAPPRIS P1 BASIC6.27□□□□□ -1.41
Nup88Q8CEC0 1500015L24Rik-202ENSMUST00000179640 780 ntTSL 1 (best) BASIC6.27□□□□□ -1.41
Nup88Q8CEC0 Gm28269-201ENSMUST00000189511 559 ntAPPRIS P1 TSL 3 BASIC6.27□□□□□ -1.41
Nup88Q8CEC0 Gm43444-201ENSMUST00000198123 291 ntBASIC6.27□□□□□ -1.41
Nup88Q8CEC0 4930563F08Rik-201ENSMUST00000198640 515 ntTSL 1 (best) BASIC6.27□□□□□ -1.41
Nup88Q8CEC0 4930405G09Rik-201ENSMUST00000207912 1060 ntBASIC6.27□□□□□ -1.41
Nup88Q8CEC0 Gm15839-202ENSMUST00000211219 664 ntTSL 3 BASIC6.27□□□□□ -1.41
Retrieved 100 of 76,532 protein–RNA pairs in 63.4 ms