Protein–RNA interactions for Protein: Q6ZPL9

Ddx55, ATP-dependent RNA helicase DDX55, mousemouse

Known RBP Predictions only

Length 600 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx55Q6ZPL9 Csnka2ip-201ENSMUST00000089279 1336 ntAPPRIS P2 BASIC6.5□□□□□ -1.37
Ddx55Q6ZPL9 E330034G19Rik-203ENSMUST00000161740 1544 ntAPPRIS P2 TSL 1 (best) BASIC6.5□□□□□ -1.37
Ddx55Q6ZPL9 Gm8401-201ENSMUST00000120248 1739 ntBASIC6.5□□□□□ -1.37
Ddx55Q6ZPL9 Olfr904-202ENSMUST00000216724 5197 ntAPPRIS P1 TSL 5 BASIC6.5□□□□□ -1.37
Ddx55Q6ZPL9 Lilra6-201ENSMUST00000038176 2103 ntAPPRIS P1 TSL 1 (best) BASIC6.5□□□□□ -1.37
Ddx55Q6ZPL9 Olfr532-203ENSMUST00000213801 4232 ntAPPRIS P1 TSL 5 BASIC6.5□□□□□ -1.37
Ddx55Q6ZPL9 Myo3b-201ENSMUST00000060208 6256 ntAPPRIS P2 TSL 5 BASIC6.5□□□□□ -1.37
Ddx55Q6ZPL9 Pde1a-202ENSMUST00000102651 1673 ntTSL 1 (best) BASIC6.5□□□□□ -1.37
Ddx55Q6ZPL9 Pde1a-201ENSMUST00000090756 1661 ntTSL 1 (best) BASIC6.5□□□□□ -1.37
Ddx55Q6ZPL9 Gm14308-203ENSMUST00000119149 1458 ntTSL 1 (best) BASIC6.5□□□□□ -1.37
Ddx55Q6ZPL9 Gm14434-202ENSMUST00000120959 1458 ntTSL 1 (best) BASIC6.5□□□□□ -1.37
Ddx55Q6ZPL9 Casp1-201ENSMUST00000027015 1497 ntAPPRIS P1 TSL 1 (best) BASIC6.5□□□□□ -1.37
Ddx55Q6ZPL9 Gm10319-201ENSMUST00000078431 1355 ntTSL 1 (best) BASIC6.5□□□□□ -1.37
Ddx55Q6ZPL9 Ighv5-16-201ENSMUST00000103458 350 ntAPPRIS ALT2 BASIC6.5□□□□□ -1.37
Ddx55Q6ZPL9 Gm26146-201ENSMUST00000104478 185 ntBASIC6.5□□□□□ -1.37
Ddx55Q6ZPL9 Gm13084-202ENSMUST00000105769 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC6.5□□□□□ -1.37
Ddx55Q6ZPL9 Hbb-bh2-201ENSMUST00000106866 558 ntAPPRIS P1 TSL 1 (best) BASIC6.5□□□□□ -1.37
Ddx55Q6ZPL9 Glrb-202ENSMUST00000107743 1101 ntTSL 5 BASIC6.5□□□□□ -1.37
Ddx55Q6ZPL9 Dnajc19-ps-201ENSMUST00000120890 351 ntBASIC6.5□□□□□ -1.37
Ddx55Q6ZPL9 Gm13028-201ENSMUST00000128563 277 ntTSL 3 BASIC6.5□□□□□ -1.37
Ddx55Q6ZPL9 Gm21718-202ENSMUST00000186974 817 ntTSL 5 BASIC6.5□□□□□ -1.37
Ddx55Q6ZPL9 9330198I05Rik-201ENSMUST00000196846 1095 ntTSL 1 (best) BASIC6.5□□□□□ -1.37
Ddx55Q6ZPL9 Gm6260-202ENSMUST00000197170 921 ntTSL 1 (best) BASIC6.5□□□□□ -1.37
Ddx55Q6ZPL9 Gm4602-201ENSMUST00000203198 308 ntBASIC6.5□□□□□ -1.37
Ddx55Q6ZPL9 Gm45082-201ENSMUST00000206082 601 ntBASIC6.5□□□□□ -1.37
Ddx55Q6ZPL9 Gm45070-201ENSMUST00000208100 246 ntBASIC6.5□□□□□ -1.37
Ddx55Q6ZPL9 AC113305.1-201ENSMUST00000214664 724 ntBASIC6.5□□□□□ -1.37
Ddx55Q6ZPL9 Olfr274-ps1-201ENSMUST00000216601 595 ntBASIC6.5□□□□□ -1.37
Ddx55Q6ZPL9 AC153932.1-201ENSMUST00000218558 787 ntBASIC6.5□□□□□ -1.37
Ddx55Q6ZPL9 AC159238.1-201ENSMUST00000220699 343 ntTSL 3 BASIC6.5□□□□□ -1.37
Ddx55Q6ZPL9 AC117240.2-201ENSMUST00000220921 263 ntBASIC6.5□□□□□ -1.37
Ddx55Q6ZPL9 AC163721.1-201ENSMUST00000222669 394 ntTSL 3 BASIC6.5□□□□□ -1.37
Ddx55Q6ZPL9 Ube2dnl2-201ENSMUST00000062695 743 ntAPPRIS P1 TSL 1 (best) BASIC6.5□□□□□ -1.37
Ddx55Q6ZPL9 Tas2r109-201ENSMUST00000067539 951 ntAPPRIS P1 BASIC6.5□□□□□ -1.37
Ddx55Q6ZPL9 Bglap-201ENSMUST00000076048 440 ntAPPRIS P1 TSL 1 (best) BASIC6.5□□□□□ -1.37
Ddx55Q6ZPL9 Gm23514-201ENSMUST00000082827 130 ntBASIC6.5□□□□□ -1.37
Ddx55Q6ZPL9 AC160028.2-201ENSMUST00000218937 2519 ntBASIC6.5□□□□□ -1.37
Ddx55Q6ZPL9 Gm10295-201ENSMUST00000094315 2525 ntAPPRIS P1 BASIC6.5□□□□□ -1.37
Ddx55Q6ZPL9 Sgip1-203ENSMUST00000080728 3712 ntAPPRIS P3 TSL 1 (best) BASIC6.5□□□□□ -1.37
Ddx55Q6ZPL9 Vmn2r61-201ENSMUST00000166131 2598 ntAPPRIS P1 TSL 5 BASIC6.5□□□□□ -1.37
Ddx55Q6ZPL9 Olfr615-202ENSMUST00000214345 3403 ntAPPRIS P1 TSL 5 BASIC6.5□□□□□ -1.37
Ddx55Q6ZPL9 Atf2-207ENSMUST00000112017 2396 ntAPPRIS P1 TSL 5 BASIC6.5□□□□□ -1.37
Ddx55Q6ZPL9 Dcdc2c-204ENSMUST00000189735 1434 ntTSL 1 (best) BASIC6.5□□□□□ -1.37
Ddx55Q6ZPL9 Armc4-201ENSMUST00000081275 3477 ntAPPRIS P1 TSL 5 BASIC6.49□□□□□ -1.37
Ddx55Q6ZPL9 Vmn1r6-206ENSMUST00000227847 8073 ntAPPRIS P2 BASIC6.49□□□□□ -1.37
Ddx55Q6ZPL9 Clec12a-201ENSMUST00000065289 2502 ntAPPRIS P1 TSL 1 (best) BASIC6.49□□□□□ -1.37
Ddx55Q6ZPL9 Olfr1273-ps-201ENSMUST00000214356 4698 ntAPPRIS P1 TSL 3 BASIC6.49□□□□□ -1.37
Ddx55Q6ZPL9 Slc19a3-203ENSMUST00000164473 1550 ntAPPRIS P1 TSL 1 (best) BASIC6.49□□□□□ -1.37
Ddx55Q6ZPL9 Dpp10-202ENSMUST00000112606 15297 ntAPPRIS P2 TSL 1 (best) BASIC6.49□□□□□ -1.37
Ddx55Q6ZPL9 Gm37470-201ENSMUST00000193378 2798 ntBASIC6.49□□□□□ -1.37
Ddx55Q6ZPL9 Gm38387-201ENSMUST00000191945 2577 ntBASIC6.49□□□□□ -1.37
Ddx55Q6ZPL9 Kcnmb2-202ENSMUST00000119970 2919 ntAPPRIS P1 TSL 1 (best) BASIC6.49□□□□□ -1.37
Ddx55Q6ZPL9 Tex38-201ENSMUST00000106521 802 ntAPPRIS P1 TSL 1 (best) BASIC6.49□□□□□ -1.37
Ddx55Q6ZPL9 Olfr616-201ENSMUST00000106886 954 ntAPPRIS P1 BASIC6.49□□□□□ -1.37
Ddx55Q6ZPL9 Gm25509-201ENSMUST00000116985 106 ntBASIC6.49□□□□□ -1.37
Ddx55Q6ZPL9 Gm15803-201ENSMUST00000120118 394 ntBASIC6.49□□□□□ -1.37
Ddx55Q6ZPL9 Gm12587-201ENSMUST00000120180 427 ntBASIC6.49□□□□□ -1.37
Ddx55Q6ZPL9 Olfr118-201ENSMUST00000122036 966 ntAPPRIS P1 BASIC6.49□□□□□ -1.37
Ddx55Q6ZPL9 Gm25102-201ENSMUST00000122479 112 ntBASIC6.49□□□□□ -1.37
Ddx55Q6ZPL9 Gm15178-201ENSMUST00000132100 472 ntTSL 5 BASIC6.49□□□□□ -1.37
Ddx55Q6ZPL9 Gm12701-201ENSMUST00000134206 659 ntTSL 1 (best) BASIC6.49□□□□□ -1.37
Ddx55Q6ZPL9 4930547E08Rik-201ENSMUST00000143559 541 ntTSL 1 (best) BASIC6.49□□□□□ -1.37
Ddx55Q6ZPL9 Gm22818-201ENSMUST00000157446 104 ntBASIC6.49□□□□□ -1.37
Ddx55Q6ZPL9 Gm24002-201ENSMUST00000158456 104 ntBASIC6.49□□□□□ -1.37
Ddx55Q6ZPL9 6030400A10Rik-201ENSMUST00000199734 1212 ntBASIC6.49□□□□□ -1.37
Ddx55Q6ZPL9 Gm44604-201ENSMUST00000205475 496 ntBASIC6.49□□□□□ -1.37
Ddx55Q6ZPL9 Gm19880-201ENSMUST00000207731 318 ntBASIC6.49□□□□□ -1.37
Ddx55Q6ZPL9 Gm44919-201ENSMUST00000208587 1073 ntBASIC6.49□□□□□ -1.37
Ddx55Q6ZPL9 Gm17766-201ENSMUST00000209223 442 ntBASIC6.49□□□□□ -1.37
Ddx55Q6ZPL9 Olfr494-202ENSMUST00000210291 947 ntAPPRIS P1 BASIC6.49□□□□□ -1.37
Ddx55Q6ZPL9 Gm18541-201ENSMUST00000215935 538 ntBASIC6.49□□□□□ -1.37
Ddx55Q6ZPL9 Olfr697-202ENSMUST00000217734 1190 ntAPPRIS P1 TSL 5 BASIC6.49□□□□□ -1.37
Ddx55Q6ZPL9 Gm35890-201ENSMUST00000221195 564 ntTSL 5 BASIC6.49□□□□□ -1.37
Ddx55Q6ZPL9 AC122295.1-201ENSMUST00000223476 388 ntBASIC6.49□□□□□ -1.37
Ddx55Q6ZPL9 AC132833.3-201ENSMUST00000227472 866 ntBASIC6.49□□□□□ -1.37
Ddx55Q6ZPL9 A630091E08Rik-201ENSMUST00000069035 828 ntTSL 1 (best) BASIC6.49□□□□□ -1.37
Ddx55Q6ZPL9 Gm25005-201ENSMUST00000083812 156 ntBASIC6.49□□□□□ -1.37
Ddx55Q6ZPL9 Rap2c-201ENSMUST00000053593 3545 ntAPPRIS P1 TSL 1 (best) BASIC6.49□□□□□ -1.37
Ddx55Q6ZPL9 Gm37589-201ENSMUST00000193609 3994 ntBASIC6.49□□□□□ -1.37
Ddx55Q6ZPL9 Prrc2c-201ENSMUST00000028016 8815 ntAPPRIS ALT2 TSL 5 BASIC6.49□□□□□ -1.37
Ddx55Q6ZPL9 B130006D01Rik-201ENSMUST00000100534 3124 ntAPPRIS P1 BASIC6.49□□□□□ -1.37
Ddx55Q6ZPL9 Ccr9-203ENSMUST00000166236 5197 ntAPPRIS P1 TSL 1 (best) BASIC6.49□□□□□ -1.37
Ddx55Q6ZPL9 Speer5-ps1-203ENSMUST00000217649 7431 ntTSL 5 BASIC6.49□□□□□ -1.37
Ddx55Q6ZPL9 AC151904.4-201ENSMUST00000219868 1319 ntBASIC6.49□□□□□ -1.37
Ddx55Q6ZPL9 Rsrc2-210ENSMUST00000182489 1665 ntTSL 5 BASIC6.49□□□□□ -1.37
Ddx55Q6ZPL9 Gm20287-201ENSMUST00000172848 2367 ntBASIC6.49□□□□□ -1.37
Ddx55Q6ZPL9 4930440C22Rik-201ENSMUST00000185490 1565 ntTSL 1 (best) BASIC6.48□□□□□ -1.37
Ddx55Q6ZPL9 Shprh-201ENSMUST00000044053 9271 ntAPPRIS P4 TSL 1 (best) BASIC6.48□□□□□ -1.37
Ddx55Q6ZPL9 Vmn2r10-201ENSMUST00000079163 2544 ntAPPRIS P1 TSL 5 BASIC6.48□□□□□ -1.37
Ddx55Q6ZPL9 Bmp10-201ENSMUST00000032125 4490 ntAPPRIS P1 TSL 1 (best) BASIC6.48□□□□□ -1.37
Ddx55Q6ZPL9 Xpr1-201ENSMUST00000027741 7492 ntAPPRIS P1 TSL 1 (best) BASIC6.48□□□□□ -1.37
Ddx55Q6ZPL9 LOC102637012-201ENSMUST00000217248 2562 ntBASIC6.48□□□□□ -1.37
Ddx55Q6ZPL9 Cx3cr1-201ENSMUST00000064165 3753 ntAPPRIS P1 TSL 1 (best) BASIC6.48□□□□□ -1.37
Ddx55Q6ZPL9 Olfr47-202ENSMUST00000215569 1603 ntAPPRIS P1 TSL 5 BASIC6.48□□□□□ -1.37
Ddx55Q6ZPL9 Olfr508-201ENSMUST00000072914 1635 ntAPPRIS P1 BASIC6.48□□□□□ -1.37
Ddx55Q6ZPL9 Kat7-201ENSMUST00000072621 3324 ntTSL 5 BASIC6.48□□□□□ -1.37
Ddx55Q6ZPL9 Serpinb7-201ENSMUST00000086690 1887 ntAPPRIS P1 TSL 1 (best) BASIC6.48□□□□□ -1.37
Ddx55Q6ZPL9 Usp25-201ENSMUST00000023580 4412 ntAPPRIS P1 TSL 1 (best) BASIC6.48□□□□□ -1.37
Ddx55Q6ZPL9 Gm15560-201ENSMUST00000117107 643 ntBASIC6.48□□□□□ -1.37
Ddx55Q6ZPL9 Gm8569-201ENSMUST00000117630 647 ntBASIC6.48□□□□□ -1.37
Retrieved 100 of 76,532 protein–RNA pairs in 99.4 ms