Protein–RNA interactions for Protein: Q62231

Six1, Homeobox protein SIX1, mousemouse

Predictions only

Length 284 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Six1Q62231 Gm28851-201ENSMUST00000187800 174 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
Six1Q62231 Gm28886-202ENSMUST00000187889 484 ntBASIC5.3□□□□□ -1.56
Six1Q62231 Gm28554-201ENSMUST00000187964 174 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
Six1Q62231 Gm28984-201ENSMUST00000188202 174 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
Six1Q62231 Gm28103-201ENSMUST00000188392 416 ntTSL 5 BASIC5.3□□□□□ -1.56
Six1Q62231 Gm21529-202ENSMUST00000188473 174 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
Six1Q62231 Gm28604-202ENSMUST00000188638 174 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
Six1Q62231 Gm21588-202ENSMUST00000188721 174 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
Six1Q62231 Gm21539-202ENSMUST00000188764 174 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
Six1Q62231 Gm28216-201ENSMUST00000188785 174 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
Six1Q62231 Gm28576-201ENSMUST00000189007 919 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
Six1Q62231 Gm29645-201ENSMUST00000189117 174 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
Six1Q62231 Gm28554-202ENSMUST00000189175 484 ntBASIC5.3□□□□□ -1.56
Six1Q62231 Gm21413-201ENSMUST00000189224 174 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
Six1Q62231 Gm21723-202ENSMUST00000189444 174 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
Six1Q62231 Gm36782-201ENSMUST00000189459 174 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
Six1Q62231 Gm21419-201ENSMUST00000189495 173 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
Six1Q62231 Gm28566-202ENSMUST00000189532 174 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
Six1Q62231 Gm29213-202ENSMUST00000189703 484 ntBASIC5.3□□□□□ -1.56
Six1Q62231 Gm21626-202ENSMUST00000189751 174 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
Six1Q62231 Gm28851-202ENSMUST00000189757 484 ntBASIC5.3□□□□□ -1.56
Six1Q62231 Gm28656-201ENSMUST00000190017 174 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
Six1Q62231 Gm28461-201ENSMUST00000190023 484 ntBASIC5.3□□□□□ -1.56
Six1Q62231 Gm21562-202ENSMUST00000190314 174 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
Six1Q62231 Gm28517-201ENSMUST00000190343 174 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
Six1Q62231 Gm29531-201ENSMUST00000190569 174 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
Six1Q62231 Gm21914-202ENSMUST00000190577 174 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
Six1Q62231 Gm20978-201ENSMUST00000190688 174 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
Six1Q62231 Gm20963-201ENSMUST00000190880 174 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
Six1Q62231 Gm29316-201ENSMUST00000190953 174 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
Six1Q62231 Gm29351-201ENSMUST00000191052 174 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
Six1Q62231 Gm29466-201ENSMUST00000191077 174 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
Six1Q62231 Gm20987-201ENSMUST00000191165 174 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
Six1Q62231 Gm28194-202ENSMUST00000191217 174 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
Six1Q62231 Gm28461-202ENSMUST00000191406 174 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
Six1Q62231 Gm28137-201ENSMUST00000191478 416 ntTSL 5 BASIC5.3□□□□□ -1.56
Six1Q62231 Gm37927-201ENSMUST00000192238 174 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
Six1Q62231 Gm37544-201ENSMUST00000192803 174 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
Six1Q62231 Gm37635-201ENSMUST00000193129 174 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
Six1Q62231 Gm21809-202ENSMUST00000194072 174 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
Six1Q62231 Gm37102-201ENSMUST00000195740 1105 ntBASIC5.3□□□□□ -1.56
Six1Q62231 Gm29755-201ENSMUST00000196976 948 ntBASIC5.3□□□□□ -1.56
Six1Q62231 Olfr1476-ps1-201ENSMUST00000208572 367 ntBASIC5.3□□□□□ -1.56
Six1Q62231 AC140409.4-201ENSMUST00000215757 538 ntBASIC5.3□□□□□ -1.56
Six1Q62231 Gm46401-201ENSMUST00000221291 1089 ntTSL 5 BASIC5.3□□□□□ -1.56
Six1Q62231 Olfr801-201ENSMUST00000072063 957 ntAPPRIS P1 BASIC5.3□□□□□ -1.56
Six1Q62231 Ube2d4-201ENSMUST00000075109 406 ntTSL 5 BASIC5.3□□□□□ -1.56
Six1Q62231 Gm26330-201ENSMUST00000082817 104 ntBASIC5.3□□□□□ -1.56
Six1Q62231 Gm25818-201ENSMUST00000083282 164 ntBASIC5.3□□□□□ -1.56
Six1Q62231 Hist1h2bb-201ENSMUST00000099703 508 ntAPPRIS P1 BASIC5.3□□□□□ -1.56
Six1Q62231 Zfp280c-201ENSMUST00000072292 4045 ntAPPRIS ALT2 TSL 1 (best) BASIC5.3□□□□□ -1.56
Six1Q62231 Nfia-201ENSMUST00000052018 9249 ntTSL 5 BASIC5.3□□□□□ -1.56
Six1Q62231 Gm7416-201ENSMUST00000117448 1487 ntBASIC5.3□□□□□ -1.56
Six1Q62231 Gm15737-201ENSMUST00000113434 4894 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
Six1Q62231 Dnah6-204ENSMUST00000204053 12435 ntAPPRIS P2 TSL 5 BASIC5.3□□□□□ -1.56
Six1Q62231 Plcz1-201ENSMUST00000032356 2271 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
Six1Q62231 Gm43210-201ENSMUST00000196743 6152 ntBASIC5.29□□□□□ -1.56
Six1Q62231 Gria4-204ENSMUST00000212533 5207 ntAPPRIS ALT1 TSL 1 (best) BASIC5.29□□□□□ -1.56
Six1Q62231 Gm38368-201ENSMUST00000193181 1335 ntBASIC5.29□□□□□ -1.56
Six1Q62231 Rbm44-201ENSMUST00000094698 3851 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
Six1Q62231 Gm26514-201ENSMUST00000181087 4231 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
Six1Q62231 Gm11032-201ENSMUST00000109941 102 ntAPPRIS P1 TSL 5 BASIC5.29□□□□□ -1.56
Six1Q62231 Gm12768-201ENSMUST00000120055 759 ntBASIC5.29□□□□□ -1.56
Six1Q62231 Gm13787-201ENSMUST00000120422 168 ntBASIC5.29□□□□□ -1.56
Six1Q62231 Fundc1-203ENSMUST00000142638 597 ntTSL 3 BASIC5.29□□□□□ -1.56
Six1Q62231 Gm24944-201ENSMUST00000158330 128 ntBASIC5.29□□□□□ -1.56
Six1Q62231 Vmn1r-ps79-201ENSMUST00000173508 963 ntBASIC5.29□□□□□ -1.56
Six1Q62231 Vmn1r-ps70-201ENSMUST00000173675 963 ntBASIC5.29□□□□□ -1.56
Six1Q62231 Gm38180-201ENSMUST00000192381 395 ntTSL 5 BASIC5.29□□□□□ -1.56
Six1Q62231 Ighv1-27-201ENSMUST00000194473 340 ntBASIC5.29□□□□□ -1.56
Six1Q62231 Gm38562-201ENSMUST00000199398 1126 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
Six1Q62231 Gm35648-201ENSMUST00000202304 475 ntBASIC5.29□□□□□ -1.56
Six1Q62231 Gm6261-201ENSMUST00000204707 760 ntBASIC5.29□□□□□ -1.56
Six1Q62231 Gm45494-201ENSMUST00000211167 545 ntTSL 3 BASIC5.29□□□□□ -1.56
Six1Q62231 CT025625.1-201ENSMUST00000217786 460 ntTSL 5 BASIC5.29□□□□□ -1.56
Six1Q62231 AC159379.1-201ENSMUST00000218192 620 ntTSL 5 BASIC5.29□□□□□ -1.56
Six1Q62231 AC160031.1-201ENSMUST00000219914 522 ntBASIC5.29□□□□□ -1.56
Six1Q62231 Vmn1r39-202ENSMUST00000226783 918 ntAPPRIS P2 BASIC5.29□□□□□ -1.56
Six1Q62231 AC133283.1-201ENSMUST00000228443 859 ntBASIC5.29□□□□□ -1.56
Six1Q62231 Olfr591-201ENSMUST00000074272 945 ntAPPRIS P1 BASIC5.29□□□□□ -1.56
Six1Q62231 Mir449a-201ENSMUST00000083641 91 ntBASIC5.29□□□□□ -1.56
Six1Q62231 Vmn1r183-201ENSMUST00000086012 918 ntAPPRIS P1 BASIC5.29□□□□□ -1.56
Six1Q62231 Vmn2r124-201ENSMUST00000176802 2568 ntAPPRIS P1 TSL 5 BASIC5.29□□□□□ -1.56
Six1Q62231 Dsc1-202ENSMUST00000224432 4085 ntAPPRIS ALT2 BASIC5.29□□□□□ -1.56
Six1Q62231 AC121844.3-201ENSMUST00000219124 1785 ntBASIC5.29□□□□□ -1.56
Six1Q62231 Wdr17-206ENSMUST00000144711 4720 ntAPPRIS P3 TSL 1 (best) BASIC5.29□□□□□ -1.56
Six1Q62231 Olfr1279-203ENSMUST00000216697 3385 ntAPPRIS ALT1 TSL 5 BASIC5.29□□□□□ -1.56
Six1Q62231 Gm37509-201ENSMUST00000194867 3169 ntBASIC5.28□□□□□ -1.56
Six1Q62231 Gm21244-202ENSMUST00000189201 3115 ntAPPRIS P1 TSL 5 BASIC5.28□□□□□ -1.56
Six1Q62231 AC153532.3-201ENSMUST00000218660 3848 ntBASIC5.28□□□□□ -1.56
Six1Q62231 Gm19950-204ENSMUST00000208167 4196 ntTSL 5 BASIC5.28□□□□□ -1.56
Six1Q62231 Ash1l-201ENSMUST00000090933 11268 ntAPPRIS P1 TSL 5 BASIC5.28□□□□□ -1.56
Six1Q62231 Zfp143-202ENSMUST00000169638 2914 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
Six1Q62231 Zkscan8-204ENSMUST00000224362 6954 ntAPPRIS ALT2 BASIC5.28□□□□□ -1.56
Six1Q62231 Ccna2-205ENSMUST00000196316 2001 ntTSL 5 BASIC5.28□□□□□ -1.56
Six1Q62231 Gm9923-201ENSMUST00000217785 1836 ntBASIC5.28□□□□□ -1.56
Six1Q62231 Gm28687-201ENSMUST00000187203 1494 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
Six1Q62231 Gm29373-201ENSMUST00000190660 1494 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
Six1Q62231 Gm11674-201ENSMUST00000124855 3005 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
Six1Q62231 Gm4922-201ENSMUST00000055107 1950 ntAPPRIS P1 TSL 3 BASIC5.28□□□□□ -1.56
Retrieved 100 of 76,532 protein–RNA pairs in 75.8 ms