Protein–RNA interactions for Protein: Q3UDK1

Trafd1, TRAF-type zinc finger domain-containing protein 1, mousemouse

Predictions only

Length 580 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trafd1Q3UDK1 A830019P07Rik-201ENSMUST00000178904 1777 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
Trafd1Q3UDK1 Gm23593-201ENSMUST00000104309 120 ntBASIC5.25□□□□□ -1.57
Trafd1Q3UDK1 Gp6-201ENSMUST00000108590 965 ntAPPRIS ALT2 TSL 1 (best) BASIC5.25□□□□□ -1.57
Trafd1Q3UDK1 Fabp12-202ENSMUST00000117917 648 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
Trafd1Q3UDK1 1110059G10Rik-202ENSMUST00000118422 723 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
Trafd1Q3UDK1 Gm15772-201ENSMUST00000118533 438 ntBASIC5.25□□□□□ -1.57
Trafd1Q3UDK1 Gm23211-201ENSMUST00000122717 308 ntBASIC5.25□□□□□ -1.57
Trafd1Q3UDK1 Gm8988-201ENSMUST00000155015 1240 ntBASIC5.25□□□□□ -1.57
Trafd1Q3UDK1 Gm14216-202ENSMUST00000155334 492 ntTSL 2 BASIC5.25□□□□□ -1.57
Trafd1Q3UDK1 Gm24239-201ENSMUST00000157791 255 ntBASIC5.25□□□□□ -1.57
Trafd1Q3UDK1 Gm9294-201ENSMUST00000165198 789 ntBASIC5.25□□□□□ -1.57
Trafd1Q3UDK1 Gm3216-201ENSMUST00000166927 486 ntBASIC5.25□□□□□ -1.57
Trafd1Q3UDK1 Gm6047-201ENSMUST00000167221 574 ntBASIC5.25□□□□□ -1.57
Trafd1Q3UDK1 Gm3141-201ENSMUST00000168726 499 ntBASIC5.25□□□□□ -1.57
Trafd1Q3UDK1 Gm20397-201ENSMUST00000174520 362 ntBASIC5.25□□□□□ -1.57
Trafd1Q3UDK1 Gm19891-201ENSMUST00000189771 303 ntBASIC5.25□□□□□ -1.57
Trafd1Q3UDK1 Gm5-202ENSMUST00000202386 420 ntTSL 3 BASIC5.25□□□□□ -1.57
Trafd1Q3UDK1 Gm15754-202ENSMUST00000202846 758 ntTSL 3 BASIC5.25□□□□□ -1.57
Trafd1Q3UDK1 Gm7825-201ENSMUST00000204046 416 ntBASIC5.25□□□□□ -1.57
Trafd1Q3UDK1 Olfr529-ps1-201ENSMUST00000211097 928 ntBASIC5.25□□□□□ -1.57
Trafd1Q3UDK1 Gm30313-201ENSMUST00000216806 597 ntTSL 3 BASIC5.25□□□□□ -1.57
Trafd1Q3UDK1 AC153548.2-201ENSMUST00000219770 885 ntBASIC5.25□□□□□ -1.57
Trafd1Q3UDK1 Gm4263-201ENSMUST00000220693 1101 ntBASIC5.25□□□□□ -1.57
Trafd1Q3UDK1 9530014B07Rik-201ENSMUST00000221882 744 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
Trafd1Q3UDK1 AC123665.6-201ENSMUST00000228568 538 ntBASIC5.25□□□□□ -1.57
Trafd1Q3UDK1 Olfr739-201ENSMUST00000075261 930 ntAPPRIS P1 BASIC5.25□□□□□ -1.57
Trafd1Q3UDK1 Olfr684-203ENSMUST00000215744 3084 ntAPPRIS P1 TSL 5 BASIC5.25□□□□□ -1.57
Trafd1Q3UDK1 Vmn2r24-201ENSMUST00000075095 2565 ntAPPRIS P1 TSL 5 BASIC5.25□□□□□ -1.57
Trafd1Q3UDK1 Skint10-201ENSMUST00000060327 1376 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
Trafd1Q3UDK1 Gm8369-201ENSMUST00000079855 1374 ntAPPRIS P1 TSL 5 BASIC5.25□□□□□ -1.57
Trafd1Q3UDK1 Zfp119b-202ENSMUST00000189452 2078 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
Trafd1Q3UDK1 Vmn1r80-206ENSMUST00000228028 6918 ntBASIC5.25□□□□□ -1.57
Trafd1Q3UDK1 Uty-204ENSMUST00000139365 4684 ntAPPRIS ALT2 TSL 1 (best) BASIC5.25□□□□□ -1.57
Trafd1Q3UDK1 Olfr1493-ps1-202ENSMUST00000208667 1828 ntAPPRIS P1 TSL 5 BASIC5.25□□□□□ -1.57
Trafd1Q3UDK1 Olfr767-202ENSMUST00000213579 5493 ntAPPRIS P1 TSL 5 BASIC5.25□□□□□ -1.57
Trafd1Q3UDK1 Gm5796-201ENSMUST00000096184 1817 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
Trafd1Q3UDK1 Olfr1383-202ENSMUST00000204706 4168 ntAPPRIS P1 TSL 3 BASIC5.25□□□□□ -1.57
Trafd1Q3UDK1 Gm20125-201ENSMUST00000185722 3201 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
Trafd1Q3UDK1 Zan-204ENSMUST00000164178 16451 ntAPPRIS P1 TSL 5 BASIC5.25□□□□□ -1.57
Trafd1Q3UDK1 4930421C12Rik-201ENSMUST00000200814 1574 ntBASIC5.25□□□□□ -1.57
Trafd1Q3UDK1 Olfr1321-202ENSMUST00000215373 4482 ntAPPRIS P1 TSL 5 BASIC5.25□□□□□ -1.57
Trafd1Q3UDK1 Gm4759-201ENSMUST00000183414 6622 ntBASIC5.24□□□□□ -1.57
Trafd1Q3UDK1 Cfap97-201ENSMUST00000034048 4619 ntAPPRIS P2 TSL 1 (best) BASIC5.24□□□□□ -1.57
Trafd1Q3UDK1 Tbc1d23-201ENSMUST00000023431 3690 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
Trafd1Q3UDK1 AC107232.1-201ENSMUST00000227785 1503 ntBASIC5.24□□□□□ -1.57
Trafd1Q3UDK1 Adgb-205ENSMUST00000179956 5218 ntAPPRIS ALT2 TSL 5 BASIC5.24□□□□□ -1.57
Trafd1Q3UDK1 Gm22266-201ENSMUST00000104011 138 ntBASIC5.24□□□□□ -1.57
Trafd1Q3UDK1 Gm25422-201ENSMUST00000104219 129 ntBASIC5.24□□□□□ -1.57
Trafd1Q3UDK1 Gm5725-201ENSMUST00000105195 924 ntAPPRIS P1 BASIC5.24□□□□□ -1.57
Trafd1Q3UDK1 Gm15185-201ENSMUST00000117397 746 ntBASIC5.24□□□□□ -1.57
Trafd1Q3UDK1 Psmb6-ps-201ENSMUST00000117520 713 ntBASIC5.24□□□□□ -1.57
Trafd1Q3UDK1 Gm13172-201ENSMUST00000118685 256 ntBASIC5.24□□□□□ -1.57
Trafd1Q3UDK1 Gm8430-201ENSMUST00000119780 471 ntBASIC5.24□□□□□ -1.57
Trafd1Q3UDK1 Gm15600-201ENSMUST00000153522 856 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
Trafd1Q3UDK1 Gm15892-203ENSMUST00000156149 1001 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
Trafd1Q3UDK1 Gm25348-201ENSMUST00000158961 111 ntBASIC5.24□□□□□ -1.57
Trafd1Q3UDK1 Smdt1-202ENSMUST00000159054 294 ntTSL 5 BASIC5.24□□□□□ -1.57
Trafd1Q3UDK1 Vmn1r129-201ENSMUST00000165961 924 ntAPPRIS P1 BASIC5.24□□□□□ -1.57
Trafd1Q3UDK1 Gm8720-201ENSMUST00000168392 924 ntAPPRIS P1 BASIC5.24□□□□□ -1.57
Trafd1Q3UDK1 Gm20647-201ENSMUST00000176396 857 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
Trafd1Q3UDK1 Gm5849-201ENSMUST00000180151 351 ntAPPRIS P1 TSL 3 BASIC5.24□□□□□ -1.57
Trafd1Q3UDK1 Prl-201ENSMUST00000018061 886 ntAPPRIS ALT2 TSL 1 (best) BASIC5.24□□□□□ -1.57
Trafd1Q3UDK1 Gm20619-205ENSMUST00000181633 581 ntTSL 2 BASIC5.24□□□□□ -1.57
Trafd1Q3UDK1 Ssxb8-202ENSMUST00000185125 559 ntAPPRIS P1 TSL 5 BASIC5.24□□□□□ -1.57
Trafd1Q3UDK1 Gm29532-201ENSMUST00000185593 622 ntTSL 5 BASIC5.24□□□□□ -1.57
Trafd1Q3UDK1 Gm29504-201ENSMUST00000185605 537 ntTSL 5 BASIC5.24□□□□□ -1.57
Trafd1Q3UDK1 Gm29360-201ENSMUST00000185625 537 ntTSL 5 BASIC5.24□□□□□ -1.57
Trafd1Q3UDK1 Gm28296-202ENSMUST00000186151 622 ntTSL 5 BASIC5.24□□□□□ -1.57
Trafd1Q3UDK1 Gm29498-201ENSMUST00000186449 537 ntTSL 5 BASIC5.24□□□□□ -1.57
Trafd1Q3UDK1 Gm28565-202ENSMUST00000186615 537 ntTSL 5 BASIC5.24□□□□□ -1.57
Trafd1Q3UDK1 Gm28297-201ENSMUST00000186679 537 ntTSL 5 BASIC5.24□□□□□ -1.57
Trafd1Q3UDK1 Gm28326-201ENSMUST00000187043 622 ntTSL 5 BASIC5.24□□□□□ -1.57
Trafd1Q3UDK1 Gm28301-201ENSMUST00000187582 537 ntTSL 5 BASIC5.24□□□□□ -1.57
Trafd1Q3UDK1 Gm28464-201ENSMUST00000187726 622 ntTSL 5 BASIC5.24□□□□□ -1.57
Trafd1Q3UDK1 Gm29286-202ENSMUST00000187736 537 ntTSL 5 BASIC5.24□□□□□ -1.57
Trafd1Q3UDK1 Gm28295-201ENSMUST00000188322 622 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
Trafd1Q3UDK1 Gm29578-201ENSMUST00000188809 537 ntTSL 5 BASIC5.24□□□□□ -1.57
Trafd1Q3UDK1 Gm29166-202ENSMUST00000189600 537 ntTSL 5 BASIC5.24□□□□□ -1.57
Trafd1Q3UDK1 Gm28765-201ENSMUST00000189752 537 ntTSL 5 BASIC5.24□□□□□ -1.57
Trafd1Q3UDK1 Gm28617-202ENSMUST00000190129 537 ntTSL 5 BASIC5.24□□□□□ -1.57
Trafd1Q3UDK1 Gm28522-202ENSMUST00000190561 537 ntTSL 5 BASIC5.24□□□□□ -1.57
Trafd1Q3UDK1 Gm28834-202ENSMUST00000190714 537 ntTSL 5 BASIC5.24□□□□□ -1.57
Trafd1Q3UDK1 Gm28987-201ENSMUST00000191071 537 ntTSL 5 BASIC5.24□□□□□ -1.57
Trafd1Q3UDK1 Gm29132-202ENSMUST00000191588 622 ntTSL 5 BASIC5.24□□□□□ -1.57
Trafd1Q3UDK1 Gm30174-201ENSMUST00000191682 537 ntTSL 5 BASIC5.24□□□□□ -1.57
Trafd1Q3UDK1 Gm36261-201ENSMUST00000191807 537 ntTSL 5 BASIC5.24□□□□□ -1.57
Trafd1Q3UDK1 Gm34550-202ENSMUST00000195186 537 ntTSL 5 BASIC5.24□□□□□ -1.57
Trafd1Q3UDK1 Gm2762-204ENSMUST00000201815 537 ntTSL 3 BASIC5.24□□□□□ -1.57
Trafd1Q3UDK1 Gm44176-201ENSMUST00000204336 276 ntTSL 5 BASIC5.24□□□□□ -1.57
Trafd1Q3UDK1 Gm44820-201ENSMUST00000207420 396 ntBASIC5.24□□□□□ -1.57
Trafd1Q3UDK1 4930503L19Rik-203ENSMUST00000212074 1210 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
Trafd1Q3UDK1 Gm45721-201ENSMUST00000212267 607 ntTSL 3 BASIC5.24□□□□□ -1.57
Trafd1Q3UDK1 AC164629.3-201ENSMUST00000219325 611 ntTSL 5 BASIC5.24□□□□□ -1.57
Trafd1Q3UDK1 Gm19095-201ENSMUST00000220533 730 ntBASIC5.24□□□□□ -1.57
Trafd1Q3UDK1 Gm11360-201ENSMUST00000221898 262 ntBASIC5.24□□□□□ -1.57
Trafd1Q3UDK1 Olfr871-201ENSMUST00000073122 1147 ntAPPRIS P1 BASIC5.24□□□□□ -1.57
Trafd1Q3UDK1 Rps27a-ps2-201ENSMUST00000078766 467 ntBASIC5.24□□□□□ -1.57
Trafd1Q3UDK1 Mir20a-201ENSMUST00000083508 107 ntBASIC5.24□□□□□ -1.57
Trafd1Q3UDK1 Gm25007-201ENSMUST00000083808 133 ntBASIC5.24□□□□□ -1.57
Trafd1Q3UDK1 Spef2-204ENSMUST00000160236 5313 ntAPPRIS ALT2 TSL 5 BASIC5.24□□□□□ -1.57
Retrieved 100 of 76,532 protein–RNA pairs in 175.3 ms