Protein–RNA interactions for Protein: Q00780

Col8a1, Collagen alpha-1(VIII) chain, mousemouse

Predictions only

Length 744 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col8a1Q00780 AC124399.1-201ENSMUST00000218334 590 ntBASIC5.48□□□□□ -1.53
Col8a1Q00780 Gm29809-201ENSMUST00000218423 493 ntBASIC5.48□□□□□ -1.53
Col8a1Q00780 Gm19116-201ENSMUST00000218592 642 ntBASIC5.48□□□□□ -1.53
Col8a1Q00780 Gm34081-201ENSMUST00000221332 690 ntTSL 5 BASIC5.48□□□□□ -1.53
Col8a1Q00780 Gm30738-201ENSMUST00000221346 502 ntBASIC5.48□□□□□ -1.53
Col8a1Q00780 Gm26861-206ENSMUST00000222633 1039 ntTSL 5 BASIC5.48□□□□□ -1.53
Col8a1Q00780 AC159619.2-201ENSMUST00000222924 401 ntBASIC5.48□□□□□ -1.53
Col8a1Q00780 AC122393.2-201ENSMUST00000226404 1093 ntBASIC5.48□□□□□ -1.53
Col8a1Q00780 AC170810.1-201ENSMUST00000228267 672 ntBASIC5.48□□□□□ -1.53
Col8a1Q00780 AC154283.1-201ENSMUST00000228417 389 ntBASIC5.48□□□□□ -1.53
Col8a1Q00780 Prr32-201ENSMUST00000040002 1110 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
Col8a1Q00780 Olfr430-201ENSMUST00000055873 954 ntAPPRIS P1 BASIC5.48□□□□□ -1.53
Col8a1Q00780 Rybp-ps-201ENSMUST00000069489 681 ntBASIC5.48□□□□□ -1.53
Col8a1Q00780 Olfr1261-201ENSMUST00000077785 921 ntAPPRIS P1 BASIC5.48□□□□□ -1.53
Col8a1Q00780 Vmn1r87-201ENSMUST00000094827 888 ntAPPRIS P1 BASIC5.48□□□□□ -1.53
Col8a1Q00780 Olfr657-201ENSMUST00000098171 960 ntAPPRIS P1 BASIC5.48□□□□□ -1.53
Col8a1Q00780 Olfr1253-201ENSMUST00000099765 957 ntAPPRIS P1 BASIC5.48□□□□□ -1.53
Col8a1Q00780 Cfap70-202ENSMUST00000022349 3549 ntAPPRIS ALT2 TSL 1 (best) BASIC5.48□□□□□ -1.53
Col8a1Q00780 Golph3l-207ENSMUST00000177390 2836 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
Col8a1Q00780 Fmn1-209ENSMUST00000161731 4262 ntAPPRIS ALT2 TSL 1 (best) BASIC5.48□□□□□ -1.53
Col8a1Q00780 Ift80-201ENSMUST00000029347 3880 ntAPPRIS P1 TSL 5 BASIC5.48□□□□□ -1.53
Col8a1Q00780 Gm8700-201ENSMUST00000222187 3054 ntBASIC5.48□□□□□ -1.53
Col8a1Q00780 Gm31218-202ENSMUST00000221428 1823 ntTSL 5 BASIC5.48□□□□□ -1.53
Col8a1Q00780 AC139941.2-201ENSMUST00000221565 1824 ntBASIC5.48□□□□□ -1.53
Col8a1Q00780 Gm40770-201ENSMUST00000220040 1502 ntTSL 5 BASIC5.48□□□□□ -1.53
Col8a1Q00780 Gm7073-203ENSMUST00000190178 1419 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
Col8a1Q00780 Prep-201ENSMUST00000099858 10933 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
Col8a1Q00780 AC125328.1-201ENSMUST00000226812 2265 ntBASIC5.48□□□□□ -1.53
Col8a1Q00780 Vwde-201ENSMUST00000054530 3979 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
Col8a1Q00780 Clca4a-201ENSMUST00000029923 3004 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
Col8a1Q00780 Gm9894-201ENSMUST00000171257 2904 ntBASIC5.47□□□□□ -1.53
Col8a1Q00780 Cpne3-201ENSMUST00000029885 5648 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
Col8a1Q00780 Gm10855-201ENSMUST00000100426 2541 ntBASIC5.47□□□□□ -1.53
Col8a1Q00780 4930444G20Rik-201ENSMUST00000092672 1773 ntAPPRIS P1 BASIC5.47□□□□□ -1.53
Col8a1Q00780 Map7d2-201ENSMUST00000043151 3087 ntAPPRIS ALT2 TSL 1 (best) BASIC5.47□□□□□ -1.53
Col8a1Q00780 Sp100-212ENSMUST00000153574 1653 ntTSL 5 BASIC5.47□□□□□ -1.53
Col8a1Q00780 Gm7361-201ENSMUST00000074148 2995 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
Col8a1Q00780 Gm10256-203ENSMUST00000189964 1573 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
Col8a1Q00780 Dlgap5-208ENSMUST00000180299 4067 ntAPPRIS ALT2 TSL 2 BASIC5.47□□□□□ -1.53
Col8a1Q00780 Stk4-202ENSMUST00000088291 4098 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
Col8a1Q00780 Gm10826-201ENSMUST00000215366 3304 ntBASIC5.47□□□□□ -1.53
Col8a1Q00780 Gm21778-202ENSMUST00000185926 1482 ntAPPRIS P1 TSL 5 BASIC5.47□□□□□ -1.53
Col8a1Q00780 Sspo-202ENSMUST00000169350 15571 ntAPPRIS P2 TSL 5 BASIC5.47□□□□□ -1.53
Col8a1Q00780 Gm15930-201ENSMUST00000156603 2037 ntBASIC5.47□□□□□ -1.53
Col8a1Q00780 Zfp936-201ENSMUST00000072829 1368 ntTSL 5 BASIC5.47□□□□□ -1.53
Col8a1Q00780 Nat8f4-201ENSMUST00000095757 3019 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
Col8a1Q00780 Vmn1r22-206ENSMUST00000228905 2394 ntBASIC5.47□□□□□ -1.53
Col8a1Q00780 Mir700-201ENSMUST00000102169 79 ntBASIC5.47□□□□□ -1.53
Col8a1Q00780 Olfr596-201ENSMUST00000104880 939 ntAPPRIS P1 BASIC5.47□□□□□ -1.53
Col8a1Q00780 Spaca7-201ENSMUST00000010579 762 ntAPPRIS P2 TSL 1 (best) BASIC5.47□□□□□ -1.53
Col8a1Q00780 Arhgdib-202ENSMUST00000111891 828 ntAPPRIS P1 TSL 2 BASIC5.47□□□□□ -1.53
Col8a1Q00780 4930402F06Rik-201ENSMUST00000113009 1150 ntAPPRIS ALT2 TSL 1 (best) BASIC5.47□□□□□ -1.53
Col8a1Q00780 Cd200r3-205ENSMUST00000114613 950 ntAPPRIS ALT2 TSL 1 (best) BASIC5.47□□□□□ -1.53
Col8a1Q00780 Xlr5d-ps-201ENSMUST00000117501 782 ntBASIC5.47□□□□□ -1.53
Col8a1Q00780 Gm25178-201ENSMUST00000122633 325 ntBASIC5.47□□□□□ -1.53
Col8a1Q00780 Gm23883-201ENSMUST00000122686 290 ntBASIC5.47□□□□□ -1.53
Col8a1Q00780 Gm16196-201ENSMUST00000137730 464 ntTSL 3 BASIC5.47□□□□□ -1.53
Col8a1Q00780 4930547E08Rik-201ENSMUST00000143559 541 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
Col8a1Q00780 AI662270-203ENSMUST00000145461 592 ntTSL 5 BASIC5.47□□□□□ -1.53
Col8a1Q00780 Gm23995-201ENSMUST00000158060 129 ntBASIC5.47□□□□□ -1.53
Col8a1Q00780 Gm16236-201ENSMUST00000159588 379 ntBASIC5.47□□□□□ -1.53
Col8a1Q00780 Gm22690-201ENSMUST00000175054 110 ntBASIC5.47□□□□□ -1.53
Col8a1Q00780 Prl-201ENSMUST00000018061 886 ntAPPRIS ALT2 TSL 1 (best) BASIC5.47□□□□□ -1.53
Col8a1Q00780 D930016D06Rik-202ENSMUST00000181620 3805 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
Col8a1Q00780 Gm4665-201ENSMUST00000183244 561 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
Col8a1Q00780 4930533P14Rik-201ENSMUST00000189056 583 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
Col8a1Q00780 Gm37837-201ENSMUST00000191743 604 ntBASIC5.47□□□□□ -1.53
Col8a1Q00780 Gm37219-201ENSMUST00000192036 926 ntBASIC5.47□□□□□ -1.53
Col8a1Q00780 Gm43608-201ENSMUST00000197703 687 ntTSL 3 BASIC5.47□□□□□ -1.53
Col8a1Q00780 Igkv13-82-201ENSMUST00000200308 346 ntBASIC5.47□□□□□ -1.53
Col8a1Q00780 Gm26911-202ENSMUST00000204244 763 ntTSL 5 BASIC5.47□□□□□ -1.53
Col8a1Q00780 Gm29791-201ENSMUST00000207144 380 ntTSL 3 BASIC5.47□□□□□ -1.53
Col8a1Q00780 Spaca7-202ENSMUST00000209428 758 ntAPPRIS ALT2 TSL 1 (best) BASIC5.47□□□□□ -1.53
Col8a1Q00780 Gm38590-201ENSMUST00000209515 970 ntTSL 5 BASIC5.47□□□□□ -1.53
Col8a1Q00780 AC153971.2-201ENSMUST00000214553 777 ntBASIC5.47□□□□□ -1.53
Col8a1Q00780 Gm46223-201ENSMUST00000215196 675 ntBASIC5.47□□□□□ -1.53
Col8a1Q00780 Gm8125-201ENSMUST00000216602 738 ntBASIC5.47□□□□□ -1.53
Col8a1Q00780 AC111044.1-201ENSMUST00000220206 555 ntTSL 5 BASIC5.47□□□□□ -1.53
Col8a1Q00780 AC123705.4-203ENSMUST00000221566 380 ntTSL 3 BASIC5.47□□□□□ -1.53
Col8a1Q00780 Gm36501-201ENSMUST00000221857 745 ntBASIC5.47□□□□□ -1.53
Col8a1Q00780 Vmn1r41-203ENSMUST00000226562 1046 ntBASIC5.47□□□□□ -1.53
Col8a1Q00780 AC116656.1-201ENSMUST00000227040 755 ntBASIC5.47□□□□□ -1.53
Col8a1Q00780 AC159979.1-201ENSMUST00000227927 342 ntBASIC5.47□□□□□ -1.53
Col8a1Q00780 Olfr603-201ENSMUST00000071844 939 ntAPPRIS P1 BASIC5.47□□□□□ -1.53
Col8a1Q00780 Ear6-201ENSMUST00000074477 713 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
Col8a1Q00780 Olfr916-201ENSMUST00000081196 933 ntAPPRIS P1 BASIC5.47□□□□□ -1.53
Col8a1Q00780 Mir337-201ENSMUST00000083592 97 ntBASIC5.47□□□□□ -1.53
Col8a1Q00780 Zcchc7-208ENSMUST00000147272 4251 ntTSL 2 BASIC5.47□□□□□ -1.53
Col8a1Q00780 4732465J04Rik-202ENSMUST00000187483 2744 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
Col8a1Q00780 Olfr957-202ENSMUST00000216177 1726 ntAPPRIS P1 TSL 3 BASIC5.47□□□□□ -1.53
Col8a1Q00780 Tnfrsf22-201ENSMUST00000075588 4170 ntAPPRIS ALT2 TSL 1 (best) BASIC5.47□□□□□ -1.53
Col8a1Q00780 Ccdc82-201ENSMUST00000110583 4642 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
Col8a1Q00780 Frem2-201ENSMUST00000091137 12348 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
Col8a1Q00780 Gm37621-201ENSMUST00000194716 5531 ntBASIC5.47□□□□□ -1.53
Col8a1Q00780 AC122887.2-201ENSMUST00000219465 1603 ntBASIC5.47□□□□□ -1.53
Col8a1Q00780 Gm37761-201ENSMUST00000194989 2098 ntBASIC5.47□□□□□ -1.53
Col8a1Q00780 Dthd1-201ENSMUST00000170704 2427 ntAPPRIS P1 TSL 5 BASIC5.47□□□□□ -1.53
Col8a1Q00780 Vmn1r66-201ENSMUST00000060374 1524 ntAPPRIS P1 BASIC5.47□□□□□ -1.53
Col8a1Q00780 2310057J18Rik-202ENSMUST00000140558 1445 ntTSL 5 BASIC5.47□□□□□ -1.53
Col8a1Q00780 Gm45030-201ENSMUST00000207575 1774 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
Retrieved 100 of 76,532 protein–RNA pairs in 60.5 ms