Protein–RNA interactions for Protein: P97313

Prkdc, DNA-dependent protein kinase catalytic subunit, mousemouse

Predictions only

Length 4,128 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PrkdcP97313 Gm28957-201ENSMUST00000190174 373 ntBASIC3.48□□□□□ -1.85
PrkdcP97313 5830405F06Rik-202ENSMUST00000193357 844 ntTSL 1 (best) BASIC3.48□□□□□ -1.85
PrkdcP97313 Cd209a-204ENSMUST00000208960 844 ntAPPRIS ALT2 TSL 5 BASIC3.48□□□□□ -1.85
PrkdcP97313 E330011O21Rik-203ENSMUST00000210555 455 ntTSL 5 BASIC3.48□□□□□ -1.85
PrkdcP97313 AC174459.2-201ENSMUST00000226036 160 ntBASIC3.48□□□□□ -1.85
PrkdcP97313 AC154838.1-201ENSMUST00000228944 911 ntBASIC3.48□□□□□ -1.85
PrkdcP97313 Arfgef1-201ENSMUST00000088615 6978 ntAPPRIS P1 TSL 5 BASIC3.48□□□□□ -1.85
PrkdcP97313 4930528J11Rik-201ENSMUST00000201689 3611 ntBASIC3.48□□□□□ -1.85
PrkdcP97313 Gm26873-201ENSMUST00000181390 2368 ntTSL 5 BASIC3.48□□□□□ -1.85
PrkdcP97313 CT025556.1-201ENSMUST00000222965 1884 ntBASIC3.48□□□□□ -1.85
PrkdcP97313 Gm10030-203ENSMUST00000197321 3824 ntTSL 1 (best) BASIC3.48□□□□□ -1.85
PrkdcP97313 Akap2-207ENSMUST00000107600 7231 ntTSL 2 BASIC3.48□□□□□ -1.85
PrkdcP97313 Lpin2-203ENSMUST00000126681 4167 ntTSL 1 (best) BASIC3.48□□□□□ -1.85
PrkdcP97313 Lama3-202ENSMUST00000188815 5551 ntTSL 1 (best) BASIC3.48□□□□□ -1.85
PrkdcP97313 Plce1-201ENSMUST00000169713 9439 ntAPPRIS P2 TSL 1 (best) BASIC3.48□□□□□ -1.85
PrkdcP97313 Klri2-201ENSMUST00000050385 3913 ntAPPRIS P1 TSL 1 (best) BASIC3.48□□□□□ -1.85
PrkdcP97313 Nlrp1b-204ENSMUST00000108516 4134 ntAPPRIS P3 TSL 1 (best) BASIC3.48□□□□□ -1.85
PrkdcP97313 Gm14854-201ENSMUST00000117758 841 ntBASIC3.48□□□□□ -1.85
PrkdcP97313 Tcea1-ps1-201ENSMUST00000117942 904 ntBASIC3.48□□□□□ -1.85
PrkdcP97313 Skint2-204ENSMUST00000186969 1258 ntAPPRIS P2 TSL 1 (best) BASIC3.48□□□□□ -1.85
PrkdcP97313 Gm43616-201ENSMUST00000199347 409 ntTSL 3 BASIC3.48□□□□□ -1.85
PrkdcP97313 AC154283.1-201ENSMUST00000228417 389 ntBASIC3.48□□□□□ -1.85
PrkdcP97313 Amelx-201ENSMUST00000066112 802 ntAPPRIS P4 TSL 1 (best) BASIC3.48□□□□□ -1.85
PrkdcP97313 Olfr1407-ps1-201ENSMUST00000085885 797 ntBASIC3.48□□□□□ -1.85
PrkdcP97313 Tmprss15-201ENSMUST00000023566 4177 ntAPPRIS P3 TSL 1 (best) BASIC3.48□□□□□ -1.85
PrkdcP97313 Plekha6-202ENSMUST00000105082 7085 ntAPPRIS P2 TSL 1 (best) BASIC3.48□□□□□ -1.85
PrkdcP97313 Myt1-202ENSMUST00000108756 5509 ntAPPRIS P3 TSL 1 (best) BASIC3.48□□□□□ -1.85
PrkdcP97313 Gm12703-201ENSMUST00000145411 2039 ntTSL 2 BASIC3.48□□□□□ -1.85
PrkdcP97313 Gm26717-201ENSMUST00000181713 1418 ntTSL 1 (best) BASIC3.48□□□□□ -1.85
PrkdcP97313 Vmn2r116-201ENSMUST00000164856 2571 ntAPPRIS P1 TSL 1 (best) BASIC3.48□□□□□ -1.85
PrkdcP97313 Gm43197-201ENSMUST00000201493 2583 ntBASIC3.48□□□□□ -1.85
PrkdcP97313 Spef2-201ENSMUST00000041840 4247 ntAPPRIS P2 TSL 1 (best) BASIC3.48□□□□□ -1.85
PrkdcP97313 Acsm3-205ENSMUST00000106529 3295 ntTSL 1 (best) BASIC3.48□□□□□ -1.85
PrkdcP97313 Gm36186-201ENSMUST00000200820 2052 ntTSL 1 (best) BASIC3.48□□□□□ -1.85
PrkdcP97313 Olfr771-202ENSMUST00000214271 2098 ntAPPRIS P1 TSL 5 BASIC3.48□□□□□ -1.85
PrkdcP97313 Gm24987-201ENSMUST00000104453 134 ntBASIC3.48□□□□□ -1.85
PrkdcP97313 Gm23743-201ENSMUST00000157389 274 ntBASIC3.48□□□□□ -1.85
PrkdcP97313 Gm16094-201ENSMUST00000162784 427 ntTSL 1 (best) BASIC3.48□□□□□ -1.85
PrkdcP97313 Reg3d-202ENSMUST00000167492 644 ntTSL 5 BASIC3.48□□□□□ -1.85
PrkdcP97313 Gm6337-202ENSMUST00000170613 997 ntAPPRIS ALT2 TSL 5 BASIC3.48□□□□□ -1.85
PrkdcP97313 Mir713-201ENSMUST00000178651 108 ntBASIC3.48□□□□□ -1.85
PrkdcP97313 Ighv3-4-201ENSMUST00000193408 353 ntAPPRIS P1 BASIC3.48□□□□□ -1.85
PrkdcP97313 Tas2r145-ps3-201ENSMUST00000204526 992 ntBASIC3.48□□□□□ -1.85
PrkdcP97313 Reg3d-203ENSMUST00000205240 544 ntTSL 2 BASIC3.48□□□□□ -1.85
PrkdcP97313 Gm18462-201ENSMUST00000208112 417 ntBASIC3.48□□□□□ -1.85
PrkdcP97313 Gm18329-201ENSMUST00000215832 589 ntBASIC3.48□□□□□ -1.85
PrkdcP97313 AC187103.4-202ENSMUST00000225091 230 ntBASIC3.48□□□□□ -1.85
PrkdcP97313 Reg3d-201ENSMUST00000089667 782 ntAPPRIS P1 TSL 1 (best) BASIC3.48□□□□□ -1.85
PrkdcP97313 Kncn-201ENSMUST00000097918 951 ntAPPRIS P1 TSL 1 (best) BASIC3.48□□□□□ -1.85
PrkdcP97313 Zzz3-204ENSMUST00000106103 2674 ntAPPRIS ALT2 TSL 1 (best) BASIC3.48□□□□□ -1.85
PrkdcP97313 Zfp729a-201ENSMUST00000012314 9455 ntAPPRIS P1 TSL 1 (best) BASIC3.48□□□□□ -1.85
PrkdcP97313 D030045P18Rik-201ENSMUST00000213245 1892 ntTSL 1 (best) BASIC3.48□□□□□ -1.85
PrkdcP97313 Olfr60-205ENSMUST00000216027 3300 ntAPPRIS P1 TSL 5 BASIC3.48□□□□□ -1.85
PrkdcP97313 Cd226-201ENSMUST00000037142 2357 ntAPPRIS P1 TSL 1 (best) BASIC3.48□□□□□ -1.85
PrkdcP97313 Zfp426-201ENSMUST00000080386 2417 ntAPPRIS P3 TSL 1 (best) BASIC3.48□□□□□ -1.85
PrkdcP97313 Pax6os1-202ENSMUST00000149133 1464 ntTSL 1 (best) BASIC3.48□□□□□ -1.85
PrkdcP97313 Vmn1r86-203ENSMUST00000227220 6445 ntAPPRIS P2 BASIC3.48□□□□□ -1.85
PrkdcP97313 Vmn2r-ps38-201ENSMUST00000173752 2573 ntBASIC3.48□□□□□ -1.85
PrkdcP97313 Vmn2r24-201ENSMUST00000075095 2565 ntAPPRIS P1 TSL 5 BASIC3.48□□□□□ -1.85
PrkdcP97313 Ank3-210ENSMUST00000182155 6375 ntAPPRIS ALT2 TSL 1 (best) BASIC3.48□□□□□ -1.85
PrkdcP97313 AC105407.2-201ENSMUST00000223707 3911 ntBASIC3.48□□□□□ -1.85
PrkdcP97313 Gm10693-202ENSMUST00000205904 4007 ntTSL 1 (best) BASIC3.47□□□□□ -1.85
PrkdcP97313 Prkaa1-202ENSMUST00000228218 4618 ntBASIC3.47□□□□□ -1.85
PrkdcP97313 Vmn1r-ps79-201ENSMUST00000173508 963 ntBASIC3.47□□□□□ -1.85
PrkdcP97313 Vmn1r-ps70-201ENSMUST00000173675 963 ntBASIC3.47□□□□□ -1.85
PrkdcP97313 5730522E02Rik-208ENSMUST00000179180 450 ntAPPRIS ALT2 TSL 5 BASIC3.47□□□□□ -1.85
PrkdcP97313 Gm20822-202ENSMUST00000188422 1229 ntAPPRIS P1 TSL 1 (best) BASIC3.47□□□□□ -1.85
PrkdcP97313 1700015G11Rik-204ENSMUST00000190307 255 ntAPPRIS ALT2 TSL 3 BASIC3.47□□□□□ -1.85
PrkdcP97313 Gm20828-202ENSMUST00000190516 1229 ntAPPRIS P1 TSL 1 (best) BASIC3.47□□□□□ -1.85
PrkdcP97313 Igkv11-118-201ENSMUST00000199448 346 ntBASIC3.47□□□□□ -1.85
PrkdcP97313 AC140930.4-201ENSMUST00000220750 150 ntBASIC3.47□□□□□ -1.85
PrkdcP97313 AC124732.4-201ENSMUST00000220930 1274 ntBASIC3.47□□□□□ -1.85
PrkdcP97313 AC154371.1-201ENSMUST00000226600 412 ntBASIC3.47□□□□□ -1.85
PrkdcP97313 Ccr9-204ENSMUST00000168910 2888 ntAPPRIS P1 TSL 1 (best) BASIC3.47□□□□□ -1.85
PrkdcP97313 Nptn-205ENSMUST00000176250 4531 ntTSL 1 (best) BASIC3.47□□□□□ -1.85
PrkdcP97313 Srgap1-201ENSMUST00000020322 7711 ntAPPRIS ALT1 TSL 1 (best) BASIC3.47□□□□□ -1.85
PrkdcP97313 Gm30332-201ENSMUST00000204221 2345 ntTSL 1 (best) BASIC3.47□□□□□ -1.85
PrkdcP97313 Rad21l-202ENSMUST00000180195 1659 ntAPPRIS P2 TSL 1 (best) BASIC3.47□□□□□ -1.85
PrkdcP97313 Slf2-201ENSMUST00000096053 6880 ntAPPRIS P1 TSL 1 (best) BASIC3.47□□□□□ -1.85
PrkdcP97313 Lrrc4c-201ENSMUST00000059049 3492 ntAPPRIS P1 TSL 1 (best) BASIC3.47□□□□□ -1.85
PrkdcP97313 Gm37268-201ENSMUST00000192254 2614 ntBASIC3.47□□□□□ -1.85
PrkdcP97313 Kidins220-210ENSMUST00000222941 6277 ntAPPRIS ALT2 TSL 5 BASIC3.47□□□□□ -1.85
PrkdcP97313 Zkscan1-203ENSMUST00000110962 4843 ntTSL 1 (best) BASIC3.47□□□□□ -1.85
PrkdcP97313 Shoc2-202ENSMUST00000169861 4065 ntAPPRIS P1 TSL 1 (best) BASIC3.47□□□□□ -1.85
PrkdcP97313 Mphosph9-201ENSMUST00000031344 7747 ntAPPRIS P3 TSL 5 BASIC3.47□□□□□ -1.85
PrkdcP97313 Ncoa7-212ENSMUST00000217644 2256 ntTSL 1 (best) BASIC3.47□□□□□ -1.85
PrkdcP97313 Olfr986-204ENSMUST00000218134 3487 ntAPPRIS P1 TSL 5 BASIC3.47□□□□□ -1.85
PrkdcP97313 Thbs1-201ENSMUST00000039559 5848 ntAPPRIS P1 TSL 1 (best) BASIC3.47□□□□□ -1.85
PrkdcP97313 AC144772.1-201ENSMUST00000226372 2398 ntBASIC3.47□□□□□ -1.85
PrkdcP97313 Mrpl17-202ENSMUST00000124482 7300 ntAPPRIS P1 TSL 1 (best) BASIC3.47□□□□□ -1.85
PrkdcP97313 Gm16478-201ENSMUST00000208113 5084 ntBASIC3.47□□□□□ -1.85
PrkdcP97313 Traj50-201ENSMUST00000103693 63 ntAPPRIS P1 BASIC3.47□□□□□ -1.85
PrkdcP97313 Gm15058-201ENSMUST00000117689 458 ntBASIC3.47□□□□□ -1.85
PrkdcP97313 Gm17014-201ENSMUST00000120765 168 ntBASIC3.47□□□□□ -1.85
PrkdcP97313 Gm38221-201ENSMUST00000195146 365 ntBASIC3.47□□□□□ -1.85
PrkdcP97313 Gm45604-201ENSMUST00000209665 550 ntTSL 1 (best) BASIC3.47□□□□□ -1.85
PrkdcP97313 AC146601.1-201ENSMUST00000227910 905 ntBASIC3.47□□□□□ -1.85
PrkdcP97313 AC098742.1-201ENSMUST00000227945 373 ntBASIC3.47□□□□□ -1.85
PrkdcP97313 Fam183b-201ENSMUST00000060581 493 ntTSL 1 (best) BASIC3.47□□□□□ -1.85
PrkdcP97313 Cux1-201ENSMUST00000004097 12862 ntAPPRIS P3 TSL 1 (best) BASIC3.47□□□□□ -1.85
Retrieved 100 of 76,532 protein–RNA pairs in 58.6 ms