Protein–RNA interactions for Protein: P79621

Ciita, MHC class II transactivator, mousemouse

Predictions only

Length 1,155 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CiitaP79621 AY512915-204ENSMUST00000162315 676 ntTSL 3 BASIC5.94□□□□□ -1.46
CiitaP79621 Gm10269-201ENSMUST00000165229 372 ntAPPRIS P1 BASIC5.94□□□□□ -1.46
CiitaP79621 Vmn1r-ps71-201ENSMUST00000172648 924 ntBASIC5.94□□□□□ -1.46
CiitaP79621 Gm4221-201ENSMUST00000181538 1232 ntTSL 1 (best) BASIC5.94□□□□□ -1.46
CiitaP79621 Gm3428-201ENSMUST00000183450 521 ntTSL 1 (best) BASIC5.94□□□□□ -1.46
CiitaP79621 1700015G11Rik-202ENSMUST00000185758 366 ntAPPRIS ALT2 TSL 3 BASIC5.94□□□□□ -1.46
CiitaP79621 Gm2914-201ENSMUST00000186120 328 ntBASIC5.94□□□□□ -1.46
CiitaP79621 Gm28873-201ENSMUST00000186130 667 ntTSL 2 BASIC5.94□□□□□ -1.46
CiitaP79621 Gm29454-201ENSMUST00000190805 393 ntBASIC5.94□□□□□ -1.46
CiitaP79621 Vmn1r-ps7-201ENSMUST00000202355 928 ntBASIC5.94□□□□□ -1.46
CiitaP79621 Gm45721-201ENSMUST00000212267 607 ntTSL 3 BASIC5.94□□□□□ -1.46
CiitaP79621 AC132384.8-201ENSMUST00000218152 1204 ntBASIC5.94□□□□□ -1.46
CiitaP79621 AC153800.1-201ENSMUST00000219212 365 ntBASIC5.94□□□□□ -1.46
CiitaP79621 AC164629.3-201ENSMUST00000219325 611 ntTSL 5 BASIC5.94□□□□□ -1.46
CiitaP79621 AC162467.1-201ENSMUST00000220254 621 ntBASIC5.94□□□□□ -1.46
CiitaP79621 Clec2d-201ENSMUST00000032260 1213 ntAPPRIS P1 TSL 1 (best) BASIC5.94□□□□□ -1.46
CiitaP79621 Olfr371-201ENSMUST00000070849 939 ntAPPRIS P1 BASIC5.94□□□□□ -1.46
CiitaP79621 Gm10145-201ENSMUST00000077776 462 ntBASIC5.94□□□□□ -1.46
CiitaP79621 Olfr98-201ENSMUST00000080759 1039 ntAPPRIS P1 BASIC5.94□□□□□ -1.46
CiitaP79621 Gm23459-201ENSMUST00000083259 131 ntBASIC5.94□□□□□ -1.46
CiitaP79621 Mir337-201ENSMUST00000083592 97 ntBASIC5.94□□□□□ -1.46
CiitaP79621 Olfr48-201ENSMUST00000099762 906 ntAPPRIS P1 BASIC5.94□□□□□ -1.46
CiitaP79621 Gm7792-201ENSMUST00000201555 2473 ntAPPRIS P1 TSL 5 BASIC5.94□□□□□ -1.46
CiitaP79621 Gm26791-201ENSMUST00000180942 1605 ntTSL 1 (best) BASIC5.94□□□□□ -1.46
CiitaP79621 Gm8979-201ENSMUST00000183386 7296 ntBASIC5.94□□□□□ -1.46
CiitaP79621 Il7r-201ENSMUST00000003981 3540 ntAPPRIS P2 TSL 1 (best) BASIC5.94□□□□□ -1.46
CiitaP79621 P2ry12-203ENSMUST00000196583 2344 ntAPPRIS P1 TSL 5 BASIC5.94□□□□□ -1.46
CiitaP79621 Olfr1087-202ENSMUST00000214141 3861 ntAPPRIS P1 TSL 5 BASIC5.94□□□□□ -1.46
CiitaP79621 Dopey1-201ENSMUST00000034987 8933 ntAPPRIS P1 TSL 5 BASIC5.94□□□□□ -1.46
CiitaP79621 Olfr1279-202ENSMUST00000213823 3299 ntAPPRIS ALT1 TSL 5 BASIC5.94□□□□□ -1.46
CiitaP79621 Rsph4a-201ENSMUST00000169670 3650 ntAPPRIS P1 TSL 1 (best) BASIC5.94□□□□□ -1.46
CiitaP79621 Gm1720-201ENSMUST00000135086 1503 ntTSL 1 (best) BASIC5.94□□□□□ -1.46
CiitaP79621 Mocs2-213ENSMUST00000184245 4559 ntTSL 5 BASIC5.94□□□□□ -1.46
CiitaP79621 Gm39043-201ENSMUST00000207602 2081 ntTSL 5 BASIC5.94□□□□□ -1.46
CiitaP79621 Olfr701-203ENSMUST00000217739 4100 ntAPPRIS P1 TSL 1 (best) BASIC5.93□□□□□ -1.46
CiitaP79621 Herc1-201ENSMUST00000042824 15153 ntAPPRIS P1 TSL 5 BASIC5.93□□□□□ -1.46
CiitaP79621 B530045E10Rik-204ENSMUST00000220146 3244 ntTSL 1 (best) BASIC5.93□□□□□ -1.46
CiitaP79621 D630030B08Rik-201ENSMUST00000202983 3479 ntBASIC5.93□□□□□ -1.46
CiitaP79621 Gm8229-201ENSMUST00000168161 1403 ntAPPRIS P1 TSL 5 BASIC5.93□□□□□ -1.46
CiitaP79621 Gm17175-201ENSMUST00000172117 1403 ntAPPRIS P1 TSL 5 BASIC5.93□□□□□ -1.46
CiitaP79621 Gm42905-201ENSMUST00000196237 1611 ntBASIC5.93□□□□□ -1.46
CiitaP79621 Cul3-202ENSMUST00000164108 2442 ntTSL 5 BASIC5.93□□□□□ -1.46
CiitaP79621 Gm43788-201ENSMUST00000201539 2417 ntBASIC5.93□□□□□ -1.46
CiitaP79621 Vmn1r57-202ENSMUST00000227798 2409 ntAPPRIS P1 BASIC5.93□□□□□ -1.46
CiitaP79621 Igkv10-95-201ENSMUST00000103329 287 ntAPPRIS P1 BASIC5.93□□□□□ -1.46
CiitaP79621 Gm25758-201ENSMUST00000103987 129 ntBASIC5.93□□□□□ -1.46
CiitaP79621 Ceacam13-202ENSMUST00000108488 1005 ntAPPRIS ALT2 TSL 1 (best) BASIC5.93□□□□□ -1.46
CiitaP79621 Gm11911-201ENSMUST00000117938 1023 ntBASIC5.93□□□□□ -1.46
CiitaP79621 Gm6305-201ENSMUST00000121027 1012 ntBASIC5.93□□□□□ -1.46
CiitaP79621 Gm11423-201ENSMUST00000136051 655 ntTSL 1 (best) BASIC5.93□□□□□ -1.46
CiitaP79621 4930440I19Rik-202ENSMUST00000145972 676 ntTSL 2 BASIC5.93□□□□□ -1.46
CiitaP79621 Atxn3-204ENSMUST00000160251 998 ntTSL 1 (best) BASIC5.93□□□□□ -1.46
CiitaP79621 Gm7609-204ENSMUST00000161424 461 ntBASIC5.93□□□□□ -1.46
CiitaP79621 Esp36-201ENSMUST00000172814 1117 ntAPPRIS ALT2 TSL 1 (best) BASIC5.93□□□□□ -1.46
CiitaP79621 Vmn1r-ps66-201ENSMUST00000173436 612 ntBASIC5.93□□□□□ -1.46
CiitaP79621 Gm23806-201ENSMUST00000175157 109 ntBASIC5.93□□□□□ -1.46
CiitaP79621 Vmn1r10-201ENSMUST00000176073 936 ntAPPRIS P1 BASIC5.93□□□□□ -1.46
CiitaP79621 Esp36-202ENSMUST00000177882 1117 ntAPPRIS P2 TSL 1 (best) BASIC5.93□□□□□ -1.46
CiitaP79621 Gm8941-201ENSMUST00000181451 899 ntBASIC5.93□□□□□ -1.46
CiitaP79621 Gm36638-201ENSMUST00000193295 400 ntBASIC5.93□□□□□ -1.46
CiitaP79621 Gm43894-201ENSMUST00000203274 688 ntBASIC5.93□□□□□ -1.46
CiitaP79621 Gm43922-201ENSMUST00000205071 328 ntBASIC5.93□□□□□ -1.46
CiitaP79621 Olfr307-201ENSMUST00000069279 1012 ntAPPRIS P1 BASIC5.93□□□□□ -1.46
CiitaP79621 Olfr1480-201ENSMUST00000072219 948 ntAPPRIS P1 BASIC5.93□□□□□ -1.46
CiitaP79621 Mir133b-201ENSMUST00000083546 119 ntBASIC5.93□□□□□ -1.46
CiitaP79621 Mrgprb3-201ENSMUST00000094383 1009 ntAPPRIS P1 BASIC5.93□□□□□ -1.46
CiitaP79621 Polk-201ENSMUST00000022172 4225 ntAPPRIS P2 TSL 1 (best) BASIC5.93□□□□□ -1.46
CiitaP79621 AC155167.2-201ENSMUST00000226127 1945 ntBASIC5.93□□□□□ -1.46
CiitaP79621 Gm42798-201ENSMUST00000200853 3972 ntBASIC5.93□□□□□ -1.46
CiitaP79621 Ermn-201ENSMUST00000090940 3635 ntAPPRIS P1 TSL 1 (best) BASIC5.93□□□□□ -1.46
CiitaP79621 Lgi1-207ENSMUST00000198518 7780 ntAPPRIS P1 TSL 1 (best) BASIC5.92□□□□□ -1.46
CiitaP79621 Olfr1166-202ENSMUST00000217575 2004 ntAPPRIS P1 TSL 5 BASIC5.92□□□□□ -1.46
CiitaP79621 Txlng-202ENSMUST00000112314 3348 ntTSL 2 BASIC5.92□□□□□ -1.46
CiitaP79621 AC163731.1-201ENSMUST00000225696 3118 ntBASIC5.92□□□□□ -1.46
CiitaP79621 Gm42440-201ENSMUST00000197906 2284 ntBASIC5.92□□□□□ -1.46
CiitaP79621 Zfp955b-201ENSMUST00000099414 1638 ntAPPRIS P1 TSL 1 (best) BASIC5.92□□□□□ -1.46
CiitaP79621 Ulbp1-202ENSMUST00000177585 3815 ntAPPRIS P2 TSL 1 (best) BASIC5.92□□□□□ -1.46
CiitaP79621 Gm7970-201ENSMUST00000167615 1403 ntAPPRIS P1 TSL 5 BASIC5.92□□□□□ -1.46
CiitaP79621 Zfp78-201ENSMUST00000086323 1443 ntAPPRIS ALT2 TSL 5 BASIC5.92□□□□□ -1.46
CiitaP79621 Naip2-201ENSMUST00000067975 4709 ntAPPRIS P2 TSL 1 (best) BASIC5.92□□□□□ -1.46
CiitaP79621 Myo1b-204ENSMUST00000114541 4616 ntTSL 5 BASIC5.92□□□□□ -1.46
CiitaP79621 AC158779.2-201ENSMUST00000227902 1947 ntBASIC5.92□□□□□ -1.46
CiitaP79621 Olfr1026-203ENSMUST00000219615 1465 ntAPPRIS P1 TSL 5 BASIC5.92□□□□□ -1.46
CiitaP79621 Gm15457-201ENSMUST00000129513 3990 ntTSL 2 BASIC5.92□□□□□ -1.46
CiitaP79621 Gm23294-201ENSMUST00000104150 164 ntBASIC5.92□□□□□ -1.46
CiitaP79621 Pigp-201ENSMUST00000113905 758 ntAPPRIS P1 TSL 1 (best) BASIC5.92□□□□□ -1.46
CiitaP79621 Gm4910-201ENSMUST00000119605 366 ntBASIC5.92□□□□□ -1.46
CiitaP79621 Apol7d-203ENSMUST00000126516 1193 ntTSL 1 (best) BASIC5.92□□□□□ -1.46
CiitaP79621 1700061H18Rik-202ENSMUST00000147221 564 ntTSL 1 (best) BASIC5.92□□□□□ -1.46
CiitaP79621 C130026I21Rik-207ENSMUST00000162421 591 ntAPPRIS ALT2 TSL 1 (best) BASIC5.92□□□□□ -1.46
CiitaP79621 Gm5139-201ENSMUST00000175943 249 ntBASIC5.92□□□□□ -1.46
CiitaP79621 Gm20647-201ENSMUST00000176396 857 ntTSL 1 (best) BASIC5.92□□□□□ -1.46
CiitaP79621 Gm6223-201ENSMUST00000178436 871 ntBASIC5.92□□□□□ -1.46
CiitaP79621 Gm5849-201ENSMUST00000180151 351 ntAPPRIS P1 TSL 3 BASIC5.92□□□□□ -1.46
CiitaP79621 Gm28863-201ENSMUST00000186888 431 ntTSL 3 BASIC5.92□□□□□ -1.46
CiitaP79621 Olfr1215-201ENSMUST00000188399 943 ntAPPRIS P1 BASIC5.92□□□□□ -1.46
CiitaP79621 4930440C22Rik-202ENSMUST00000190754 512 ntTSL 3 BASIC5.92□□□□□ -1.46
CiitaP79621 Olfr8-202ENSMUST00000203851 1009 ntAPPRIS P1 TSL 3 BASIC5.92□□□□□ -1.46
CiitaP79621 Gm44048-201ENSMUST00000204531 361 ntBASIC5.92□□□□□ -1.46
CiitaP79621 Gm6828-201ENSMUST00000207902 1186 ntBASIC5.92□□□□□ -1.46
Retrieved 100 of 76,532 protein–RNA pairs in 106.6 ms