Protein–RNA interactions for Protein: P70178

Six5, Homeobox protein SIX5, mousemouse

Predictions only

Length 719 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Six5P70178 CT009754.3-201ENSMUST00000220739 3661 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
Six5P70178 AC127281.1-201ENSMUST00000221075 3667 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
Six5P70178 C230099D08Rik-201ENSMUST00000215772 2727 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
Six5P70178 Olfr441-202ENSMUST00000213649 2402 ntAPPRIS P1 TSL 3 BASIC5.39□□□□□ -1.55
Six5P70178 Rbm41-201ENSMUST00000033810 2787 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
Six5P70178 Gm16294-201ENSMUST00000070382 1459 ntTSL 2 BASIC5.39□□□□□ -1.55
Six5P70178 Vmn1r218-203ENSMUST00000227050 10364 ntAPPRIS P2 BASIC5.39□□□□□ -1.55
Six5P70178 Olfr1036-201ENSMUST00000164985 3203 ntAPPRIS P1 BASIC5.39□□□□□ -1.55
Six5P70178 Mecom-204ENSMUST00000166001 2914 ntAPPRIS ALT2 TSL 1 (best) BASIC5.39□□□□□ -1.55
Six5P70178 Gm21655-202ENSMUST00000199295 2975 ntTSL 5 BASIC5.39□□□□□ -1.55
Six5P70178 Gm21680-201ENSMUST00000200447 2975 ntAPPRIS P1 TSL 5 BASIC5.39□□□□□ -1.55
Six5P70178 Skint4-201ENSMUST00000069769 3367 ntAPPRIS ALT2 TSL 2 BASIC5.39□□□□□ -1.55
Six5P70178 Ralgapa2-202ENSMUST00000109986 11030 ntAPPRIS P2 TSL 5 BASIC5.39□□□□□ -1.55
Six5P70178 Tmigd3-201ENSMUST00000010279 900 ntAPPRIS P2 TSL 1 (best) BASIC5.39□□□□□ -1.55
Six5P70178 Gm21637-201ENSMUST00000105124 778 ntAPPRIS P1 BASIC5.39□□□□□ -1.55
Six5P70178 Scgb1b22-ps-201ENSMUST00000116008 280 ntBASIC5.39□□□□□ -1.55
Six5P70178 Gm14772-201ENSMUST00000116562 514 ntBASIC5.39□□□□□ -1.55
Six5P70178 Mrps36-ps2-201ENSMUST00000118658 309 ntBASIC5.39□□□□□ -1.55
Six5P70178 Gm14267-201ENSMUST00000119751 496 ntBASIC5.39□□□□□ -1.55
Six5P70178 Llph-ps1-201ENSMUST00000121281 390 ntBASIC5.39□□□□□ -1.55
Six5P70178 Gm12322-201ENSMUST00000121605 389 ntBASIC5.39□□□□□ -1.55
Six5P70178 Gm14808-201ENSMUST00000129259 361 ntTSL 3 BASIC5.39□□□□□ -1.55
Six5P70178 Gm13261-201ENSMUST00000137351 1020 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
Six5P70178 Tbata-207ENSMUST00000140456 953 ntTSL 5 BASIC5.39□□□□□ -1.55
Six5P70178 Gm25966-201ENSMUST00000157169 117 ntBASIC5.39□□□□□ -1.55
Six5P70178 4933417A18Rik-201ENSMUST00000160279 1045 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
Six5P70178 Gm16563-201ENSMUST00000162673 423 ntBASIC5.39□□□□□ -1.55
Six5P70178 4930558K02Rik-202ENSMUST00000162676 983 ntAPPRIS P1 TSL 3 BASIC5.39□□□□□ -1.55
Six5P70178 Gm9006-201ENSMUST00000165520 841 ntBASIC5.39□□□□□ -1.55
Six5P70178 Gm17206-201ENSMUST00000168123 577 ntTSL 5 BASIC5.39□□□□□ -1.55
Six5P70178 Samd15-201ENSMUST00000169669 1194 ntBASIC5.39□□□□□ -1.55
Six5P70178 Vmn1r173-201ENSMUST00000174055 942 ntAPPRIS P1 BASIC5.39□□□□□ -1.55
Six5P70178 Obox4-ps38-201ENSMUST00000175961 724 ntBASIC5.39□□□□□ -1.55
Six5P70178 Gm20069-201ENSMUST00000178938 545 ntTSL 2 BASIC5.39□□□□□ -1.55
Six5P70178 1110015O18Rik-201ENSMUST00000183632 570 ntTSL 3 BASIC5.39□□□□□ -1.55
Six5P70178 Mir6244-201ENSMUST00000184156 117 ntBASIC5.39□□□□□ -1.55
Six5P70178 Gm28709-201ENSMUST00000186967 456 ntTSL 5 BASIC5.39□□□□□ -1.55
Six5P70178 1700124L16Rik-202ENSMUST00000189308 546 ntTSL 5 BASIC5.39□□□□□ -1.55
Six5P70178 Gm37002-201ENSMUST00000194560 373 ntBASIC5.39□□□□□ -1.55
Six5P70178 Gm44108-201ENSMUST00000203525 422 ntBASIC5.39□□□□□ -1.55
Six5P70178 Gm44091-201ENSMUST00000205212 649 ntBASIC5.39□□□□□ -1.55
Six5P70178 Gm45596-201ENSMUST00000209279 434 ntBASIC5.39□□□□□ -1.55
Six5P70178 Axdnd1-210ENSMUST00000212747 1238 ntTSL 5 BASIC5.39□□□□□ -1.55
Six5P70178 Gm35552-201ENSMUST00000214355 396 ntTSL 5 BASIC5.39□□□□□ -1.55
Six5P70178 AC158631.2-201ENSMUST00000219999 478 ntBASIC5.39□□□□□ -1.55
Six5P70178 AC124709.3-201ENSMUST00000227294 171 ntBASIC5.39□□□□□ -1.55
Six5P70178 Prl2a1-201ENSMUST00000023602 884 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
Six5P70178 Olfr135-201ENSMUST00000076245 1079 ntAPPRIS P1 BASIC5.39□□□□□ -1.55
Six5P70178 Gm10801-201ENSMUST00000099684 504 ntAPPRIS P1 TSL 5 BASIC5.39□□□□□ -1.55
Six5P70178 Olfr1066-201ENSMUST00000099885 942 ntAPPRIS P1 BASIC5.39□□□□□ -1.55
Six5P70178 4930529C04Rik-201ENSMUST00000131367 3534 ntBASIC5.39□□□□□ -1.55
Six5P70178 Mme-205ENSMUST00000194134 8039 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
Six5P70178 Olfr536-204ENSMUST00000215340 3938 ntAPPRIS P1 TSL 5 BASIC5.39□□□□□ -1.55
Six5P70178 Olfr351-203ENSMUST00000215137 2856 ntAPPRIS P1 TSL 5 BASIC5.39□□□□□ -1.55
Six5P70178 Klrb1f-201ENSMUST00000032257 1701 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
Six5P70178 Gm43466-201ENSMUST00000197836 5214 ntBASIC5.39□□□□□ -1.55
Six5P70178 Dusp16-204ENSMUST00000149776 3305 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
Six5P70178 Gm42535-201ENSMUST00000197312 1399 ntBASIC5.39□□□□□ -1.55
Six5P70178 Gcnt1-201ENSMUST00000169897 4594 ntAPPRIS P1 TSL 3 BASIC5.39□□□□□ -1.55
Six5P70178 Ing3-201ENSMUST00000031680 3800 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
Six5P70178 Xpo7-202ENSMUST00000167242 15121 ntAPPRIS ALT1 TSL 5 BASIC5.39□□□□□ -1.55
Six5P70178 Hyal5-201ENSMUST00000031689 1838 ntAPPRIS P1 TSL 5 BASIC5.39□□□□□ -1.55
Six5P70178 Olfr495-201ENSMUST00000210990 1440 ntAPPRIS P1 BASIC5.39□□□□□ -1.55
Six5P70178 Nfia-201ENSMUST00000052018 9249 ntTSL 5 BASIC5.39□□□□□ -1.55
Six5P70178 Syt4-201ENSMUST00000025110 3901 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
Six5P70178 Klhl4-202ENSMUST00000113371 3566 ntAPPRIS ALT2 TSL 1 (best) BASIC5.39□□□□□ -1.55
Six5P70178 Klhl4-201ENSMUST00000040504 3584 ntAPPRIS P3 TSL 1 (best) BASIC5.39□□□□□ -1.55
Six5P70178 Pax6os1-202ENSMUST00000149133 1464 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
Six5P70178 Fat4-201ENSMUST00000061260 16109 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
Six5P70178 Tbc1d23-201ENSMUST00000023431 3690 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
Six5P70178 Gm2099-202ENSMUST00000223310 3341 ntBASIC5.38□□□□□ -1.55
Six5P70178 Olfr535-204ENSMUST00000214296 5120 ntAPPRIS P1 TSL 5 BASIC5.38□□□□□ -1.55
Six5P70178 Mmp1a-202ENSMUST00000217651 2011 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
Six5P70178 Slco1a5-203ENSMUST00000111825 2586 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
Six5P70178 Zfp426-203ENSMUST00000163348 2135 ntAPPRIS ALT2 TSL 1 (best) BASIC5.38□□□□□ -1.55
Six5P70178 AC160029.1-201ENSMUST00000219628 2678 ntBASIC5.38□□□□□ -1.55
Six5P70178 Olfr1273-ps-201ENSMUST00000214356 4698 ntAPPRIS P1 TSL 3 BASIC5.38□□□□□ -1.55
Six5P70178 Smim8-202ENSMUST00000108131 892 ntAPPRIS P1 TSL 3 BASIC5.38□□□□□ -1.55
Six5P70178 Casp8ap2-202ENSMUST00000108178 1189 ntAPPRIS ALT2 TSL 5 BASIC5.38□□□□□ -1.55
Six5P70178 Gm11911-201ENSMUST00000117938 1023 ntBASIC5.38□□□□□ -1.55
Six5P70178 Gm11325-201ENSMUST00000119967 469 ntBASIC5.38□□□□□ -1.55
Six5P70178 Gm16423-201ENSMUST00000120078 947 ntBASIC5.38□□□□□ -1.55
Six5P70178 Gm11848-201ENSMUST00000121207 973 ntBASIC5.38□□□□□ -1.55
Six5P70178 Gm13508-201ENSMUST00000121639 775 ntBASIC5.38□□□□□ -1.55
Six5P70178 Olfr1021-ps1-201ENSMUST00000121914 1042 ntAPPRIS P1 TSL 3 BASIC5.38□□□□□ -1.55
Six5P70178 Gm15245-201ENSMUST00000129410 1186 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
Six5P70178 1600025M17Rik-201ENSMUST00000138262 666 ntTSL 5 BASIC5.38□□□□□ -1.55
Six5P70178 Gm24441-201ENSMUST00000157235 281 ntBASIC5.38□□□□□ -1.55
Six5P70178 Gm23587-201ENSMUST00000157658 84 ntBASIC5.38□□□□□ -1.55
Six5P70178 Gm25660-201ENSMUST00000158470 104 ntBASIC5.38□□□□□ -1.55
Six5P70178 Gm3242-201ENSMUST00000171273 485 ntBASIC5.38□□□□□ -1.55
Six5P70178 Gm20795-201ENSMUST00000178528 699 ntAPPRIS P1 BASIC5.38□□□□□ -1.55
Six5P70178 Gm4832-201ENSMUST00000182679 399 ntBASIC5.38□□□□□ -1.55
Six5P70178 Gm27208-201ENSMUST00000184323 604 ntTSL 3 BASIC5.38□□□□□ -1.55
Six5P70178 Obox4-ps1-201ENSMUST00000184446 700 ntBASIC5.38□□□□□ -1.55
Six5P70178 Eloc-206ENSMUST00000186948 641 ntAPPRIS P1 TSL 2 BASIC5.38□□□□□ -1.55
Six5P70178 Gm29534-201ENSMUST00000187328 382 ntBASIC5.38□□□□□ -1.55
Six5P70178 Gm29474-201ENSMUST00000187688 379 ntBASIC5.38□□□□□ -1.55
Six5P70178 Gm29482-201ENSMUST00000187845 230 ntTSL 3 BASIC5.38□□□□□ -1.55
Six5P70178 Gm28396-201ENSMUST00000190309 379 ntBASIC5.38□□□□□ -1.55
Retrieved 100 of 76,532 protein–RNA pairs in 93.4 ms