Protein–RNA interactions for Protein: P54729

Nub1, NEDD8 ultimate buster 1, mousemouse

Predictions only

Length 614 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nub1P54729 Mir466n-201ENSMUST00000104798 94 ntBASIC6.96□□□□□ -1.3
Nub1P54729 Gm13768-201ENSMUST00000116469 929 ntBASIC6.96□□□□□ -1.3
Nub1P54729 Cyp2j7-ps3-201ENSMUST00000121405 206 ntBASIC6.96□□□□□ -1.3
Nub1P54729 2210411M09Rik-201ENSMUST00000128545 643 ntTSL 1 (best) BASIC6.96□□□□□ -1.3
Nub1P54729 1700026D11Rik-203ENSMUST00000144501 535 ntTSL 3 BASIC6.96□□□□□ -1.3
Nub1P54729 Sox5os2-201ENSMUST00000156443 627 ntTSL 3 BASIC6.96□□□□□ -1.3
Nub1P54729 Gm25553-201ENSMUST00000158076 79 ntBASIC6.96□□□□□ -1.3
Nub1P54729 C130026I21Rik-207ENSMUST00000162421 591 ntAPPRIS ALT2 TSL 1 (best) BASIC6.96□□□□□ -1.3
Nub1P54729 Gm3140-201ENSMUST00000163523 481 ntBASIC6.96□□□□□ -1.3
Nub1P54729 Gm9529-201ENSMUST00000177598 579 ntBASIC6.96□□□□□ -1.3
Nub1P54729 Gm26901-201ENSMUST00000181554 1193 ntTSL 1 (best) BASIC6.96□□□□□ -1.3
Nub1P54729 Mir7212-201ENSMUST00000184098 61 ntBASIC6.96□□□□□ -1.3
Nub1P54729 Gm18447-201ENSMUST00000187501 307 ntBASIC6.96□□□□□ -1.3
Nub1P54729 Gm9127-201ENSMUST00000188041 985 ntBASIC6.96□□□□□ -1.3
Nub1P54729 Gm28078-201ENSMUST00000190381 874 ntTSL 1 (best) BASIC6.96□□□□□ -1.3
Nub1P54729 Trbv22-201ENSMUST00000191697 291 ntBASIC6.96□□□□□ -1.3
Nub1P54729 Gm37340-201ENSMUST00000193124 759 ntTSL 5 BASIC6.96□□□□□ -1.3
Nub1P54729 Gm38084-201ENSMUST00000193488 437 ntTSL 5 BASIC6.96□□□□□ -1.3
Nub1P54729 Gm20926-201ENSMUST00000194457 696 ntBASIC6.96□□□□□ -1.3
Nub1P54729 Gm37865-201ENSMUST00000194996 437 ntTSL 5 BASIC6.96□□□□□ -1.3
Nub1P54729 Gm43849-201ENSMUST00000201086 215 ntBASIC6.96□□□□□ -1.3
Nub1P54729 Gm43224-201ENSMUST00000201567 898 ntBASIC6.96□□□□□ -1.3
Nub1P54729 Clock-204ENSMUST00000202122 5508 ntAPPRIS ALT2 TSL 1 (best) BASIC6.96□□□□□ -1.3
Nub1P54729 Gng12-208ENSMUST00000204511 739 ntTSL 5 BASIC6.96□□□□□ -1.3
Nub1P54729 Gm45673-201ENSMUST00000210293 358 ntBASIC6.96□□□□□ -1.3
Nub1P54729 Gm41231-201ENSMUST00000211525 449 ntTSL 5 BASIC6.96□□□□□ -1.3
Nub1P54729 AC153566.2-201ENSMUST00000213841 330 ntTSL 5 BASIC6.96□□□□□ -1.3
Nub1P54729 AC130217.2-201ENSMUST00000224009 2990 ntBASIC6.96□□□□□ -1.3
Nub1P54729 AC158392.2-201ENSMUST00000225402 969 ntBASIC6.96□□□□□ -1.3
Nub1P54729 Prr32-201ENSMUST00000040002 1110 ntAPPRIS P1 TSL 1 (best) BASIC6.96□□□□□ -1.3
Nub1P54729 Olfr1018-201ENSMUST00000054201 936 ntAPPRIS P1 BASIC6.96□□□□□ -1.3
Nub1P54729 Krtap14-201ENSMUST00000099562 216 ntTSL 5 BASIC6.96□□□□□ -1.3
Nub1P54729 Gm42705-201ENSMUST00000200176 2465 ntTSL 1 (best) BASIC6.96□□□□□ -1.3
Nub1P54729 Dcp2-201ENSMUST00000025350 8616 ntAPPRIS P1 TSL 1 (best) BASIC6.96□□□□□ -1.3
Nub1P54729 Cfhr2-201ENSMUST00000094489 1609 ntAPPRIS P2 TSL 1 (best) BASIC6.96□□□□□ -1.3
Nub1P54729 Usp17la-201ENSMUST00000067695 2656 ntAPPRIS P1 TSL 1 (best) BASIC6.96□□□□□ -1.3
Nub1P54729 Cep112os1-201ENSMUST00000137907 3005 ntTSL 1 (best) BASIC6.96□□□□□ -1.3
Nub1P54729 Gm46136-202ENSMUST00000217053 6329 ntTSL 5 BASIC6.96□□□□□ -1.3
Nub1P54729 Fbxw27-208ENSMUST00000212725 1483 ntAPPRIS ALT2 TSL 5 BASIC6.96□□□□□ -1.3
Nub1P54729 Gm37913-201ENSMUST00000192925 2544 ntBASIC6.96□□□□□ -1.3
Nub1P54729 Gm15475-201ENSMUST00000137673 3757 ntTSL 2 BASIC6.96□□□□□ -1.3
Nub1P54729 Zfa-ps-202ENSMUST00000180673 3420 ntBASIC6.96□□□□□ -1.3
Nub1P54729 Gm44527-202ENSMUST00000204519 1314 ntBASIC6.96□□□□□ -1.3
Nub1P54729 AC121094.1-201ENSMUST00000224766 1345 ntBASIC6.96□□□□□ -1.3
Nub1P54729 Slc16a4-201ENSMUST00000029502 2248 ntAPPRIS P3 TSL 1 (best) BASIC6.96□□□□□ -1.3
Nub1P54729 AC152946.1-201ENSMUST00000218446 3474 ntTSL 5 BASIC6.96□□□□□ -1.3
Nub1P54729 Sptlc3-201ENSMUST00000047370 2759 ntAPPRIS P1 TSL 1 (best) BASIC6.96□□□□□ -1.3
Nub1P54729 Zfp937-201ENSMUST00000073782 2797 ntAPPRIS P1 TSL 1 (best) BASIC6.96□□□□□ -1.3
Nub1P54729 Cx3cr1-202ENSMUST00000177637 3156 ntAPPRIS P1 TSL 5 BASIC6.96□□□□□ -1.3
Nub1P54729 Olfr118-202ENSMUST00000215811 1742 ntAPPRIS P1 TSL 5 BASIC6.96□□□□□ -1.3
Nub1P54729 Gm17056-201ENSMUST00000164804 2299 ntTSL 1 (best) BASIC6.96□□□□□ -1.3
Nub1P54729 Clca3b-201ENSMUST00000159989 3361 ntAPPRIS P1 TSL 1 (best) BASIC6.95□□□□□ -1.3
Nub1P54729 Dnah17-202ENSMUST00000084803 14889 ntAPPRIS P2 TSL 5 BASIC6.95□□□□□ -1.3
Nub1P54729 Nlrp1a-201ENSMUST00000048514 3903 ntAPPRIS ALT2 TSL 1 (best) BASIC6.95□□□□□ -1.3
Nub1P54729 Elavl2-209ENSMUST00000107124 4127 ntAPPRIS ALT1 TSL 1 (best) BASIC6.95□□□□□ -1.3
Nub1P54729 Rsad2-201ENSMUST00000020970 3782 ntAPPRIS P1 TSL 1 (best) BASIC6.95□□□□□ -1.3
Nub1P54729 Kdm4c-202ENSMUST00000077851 4189 ntAPPRIS P1 TSL 1 (best) BASIC6.95□□□□□ -1.3
Nub1P54729 Sytl5-201ENSMUST00000067529 2301 ntAPPRIS P3 TSL 1 (best) BASIC6.95□□□□□ -1.3
Nub1P54729 Gm5431-203ENSMUST00000109212 3063 ntAPPRIS P1 TSL 5 BASIC6.95□□□□□ -1.3
Nub1P54729 Ampd1-202ENSMUST00000155034 2913 ntTSL 1 (best) BASIC6.95□□□□□ -1.3
Nub1P54729 Gm26791-201ENSMUST00000180942 1605 ntTSL 1 (best) BASIC6.95□□□□□ -1.3
Nub1P54729 Sv2b-204ENSMUST00000206344 3910 ntAPPRIS P1 TSL 1 (best) BASIC6.95□□□□□ -1.3
Nub1P54729 Ptprd-219ENSMUST00000174531 4509 ntTSL 5 BASIC6.95□□□□□ -1.3
Nub1P54729 Olfr1250-202ENSMUST00000111527 4386 ntAPPRIS P1 TSL 2 BASIC6.95□□□□□ -1.3
Nub1P54729 Il18r1-201ENSMUST00000087983 2826 ntAPPRIS P1 TSL 5 BASIC6.95□□□□□ -1.3
Nub1P54729 Gm22231-201ENSMUST00000101027 73 ntBASIC6.95□□□□□ -1.3
Nub1P54729 Igkv9-120-201ENSMUST00000103316 353 ntAPPRIS P1 BASIC6.95□□□□□ -1.3
Nub1P54729 Gm22267-201ENSMUST00000104008 131 ntBASIC6.95□□□□□ -1.3
Nub1P54729 Rps15a-201ENSMUST00000106588 640 ntAPPRIS P1 TSL 3 BASIC6.95□□□□□ -1.3
Nub1P54729 Gm13455-201ENSMUST00000118767 517 ntBASIC6.95□□□□□ -1.3
Nub1P54729 Gm14531-201ENSMUST00000120845 285 ntBASIC6.95□□□□□ -1.3
Nub1P54729 Olfr1027-ps1-201ENSMUST00000122338 875 ntBASIC6.95□□□□□ -1.3
Nub1P54729 St8sia3os-201ENSMUST00000123473 652 ntTSL 1 (best) BASIC6.95□□□□□ -1.3
Nub1P54729 4930405D11Rik-201ENSMUST00000132218 568 ntTSL 3 BASIC6.95□□□□□ -1.3
Nub1P54729 Gm12259-201ENSMUST00000138391 328 ntTSL 1 (best) BASIC6.95□□□□□ -1.3
Nub1P54729 1700047F07Rik-201ENSMUST00000140321 543 ntTSL 1 (best) BASIC6.95□□□□□ -1.3
Nub1P54729 Gm12279-201ENSMUST00000142533 294 ntTSL 1 (best) BASIC6.95□□□□□ -1.3
Nub1P54729 Gm25057-201ENSMUST00000157366 88 ntBASIC6.95□□□□□ -1.3
Nub1P54729 Gm15647-201ENSMUST00000160178 691 ntTSL 3 BASIC6.95□□□□□ -1.3
Nub1P54729 Gm3159-201ENSMUST00000164038 997 ntAPPRIS ALT2 TSL 5 BASIC6.95□□□□□ -1.3
Nub1P54729 Vmn1r175-201ENSMUST00000166141 915 ntAPPRIS P1 BASIC6.95□□□□□ -1.3
Nub1P54729 Gm3111-201ENSMUST00000167426 490 ntBASIC6.95□□□□□ -1.3
Nub1P54729 Gm3127-201ENSMUST00000167839 997 ntAPPRIS ALT2 TSL 5 BASIC6.95□□□□□ -1.3
Nub1P54729 Gm4202-201ENSMUST00000169025 733 ntBASIC6.95□□□□□ -1.3
Nub1P54729 Gm17210-201ENSMUST00000169975 391 ntTSL 3 BASIC6.95□□□□□ -1.3
Nub1P54729 Gm20454-201ENSMUST00000172713 221 ntBASIC6.95□□□□□ -1.3
Nub1P54729 Gm24561-201ENSMUST00000175182 95 ntBASIC6.95□□□□□ -1.3
Nub1P54729 D830030K20Rik-202ENSMUST00000178670 441 ntTSL 1 (best) BASIC6.95□□□□□ -1.3
Nub1P54729 2310010J17Rik-201ENSMUST00000181189 490 ntTSL 1 (best) BASIC6.95□□□□□ -1.3
Nub1P54729 Gm20888-202ENSMUST00000186890 919 ntAPPRIS P1 TSL 1 (best) BASIC6.95□□□□□ -1.3
Nub1P54729 Eif4e-202ENSMUST00000196990 856 ntTSL 3 BASIC6.95□□□□□ -1.3
Nub1P54729 Gm43091-201ENSMUST00000198157 423 ntTSL 3 BASIC6.95□□□□□ -1.3
Nub1P54729 Smr2-204ENSMUST00000199635 680 ntAPPRIS ALT2 TSL 1 (best) BASIC6.95□□□□□ -1.3
Nub1P54729 Gm43098-201ENSMUST00000199989 1297 ntBASIC6.95□□□□□ -1.3
Nub1P54729 Gm36696-201ENSMUST00000205418 438 ntTSL 2 BASIC6.95□□□□□ -1.3
Nub1P54729 Gm17994-201ENSMUST00000209260 533 ntBASIC6.95□□□□□ -1.3
Nub1P54729 Gm8291-201ENSMUST00000209635 1261 ntBASIC6.95□□□□□ -1.3
Nub1P54729 Mbd3l1-202ENSMUST00000213625 823 ntAPPRIS P1 TSL 1 (best) BASIC6.95□□□□□ -1.3
Nub1P54729 Noxred1-201ENSMUST00000021423 1101 ntAPPRIS P1 TSL 5 BASIC6.95□□□□□ -1.3
Nub1P54729 Gm7780-201ENSMUST00000214787 406 ntBASIC6.95□□□□□ -1.3
Retrieved 100 of 76,532 protein–RNA pairs in 60 ms