Protein–RNA interactions for Protein: P53564

Cux1, Homeobox protein cut-like 1, mousemouse

Predictions only

Length 1,515 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cux1P53564 Gm17435-201ENSMUST00000181452 2994 ntTSL 1 (best) BASIC8□□□□□ -1.13
Cux1P53564 Gm20056-201ENSMUST00000194813 519 ntBASIC8□□□□□ -1.13
Cux1P53564 Gm43700-201ENSMUST00000200967 316 ntTSL 5 BASIC8□□□□□ -1.13
Cux1P53564 AC156576.2-202ENSMUST00000222525 411 ntBASIC8□□□□□ -1.13
Cux1P53564 AC154623.1-201ENSMUST00000224348 805 ntBASIC8□□□□□ -1.13
Cux1P53564 AC133910.1-201ENSMUST00000228128 624 ntBASIC8□□□□□ -1.13
Cux1P53564 Zfp143-205ENSMUST00000211798 2631 ntAPPRIS P2 TSL 1 (best) BASIC8□□□□□ -1.13
Cux1P53564 Gm43961-201ENSMUST00000203289 1872 ntBASIC8□□□□□ -1.13
Cux1P53564 Rbm46-202ENSMUST00000182637 2058 ntTSL 5 BASIC8□□□□□ -1.13
Cux1P53564 AC122382.2-201ENSMUST00000225128 3602 ntBASIC8□□□□□ -1.13
Cux1P53564 Dnah10-203ENSMUST00000141137 13862 ntAPPRIS ALT2 TSL 5 BASIC8□□□□□ -1.13
Cux1P53564 Serpinb3b-202ENSMUST00000166100 1632 ntAPPRIS P1 TSL 1 (best) BASIC8□□□□□ -1.13
Cux1P53564 Gm8878-201ENSMUST00000173552 1725 ntBASIC8□□□□□ -1.13
Cux1P53564 Slc22a27-202ENSMUST00000182102 1801 ntTSL 1 (best) BASIC8□□□□□ -1.13
Cux1P53564 Olfr459-203ENSMUST00000214976 3770 ntAPPRIS P1 TSL 2 BASIC7.99□□□□□ -1.13
Cux1P53564 BC003331-204ENSMUST00000097547 2851 ntAPPRIS ALT2 TSL 5 BASIC7.99□□□□□ -1.13
Cux1P53564 Vmn2r4-201ENSMUST00000170280 2484 ntAPPRIS P2 TSL 5 BASIC7.99□□□□□ -1.13
Cux1P53564 Lair1-203ENSMUST00000086401 2496 ntAPPRIS P3 TSL 1 (best) BASIC7.99□□□□□ -1.13
Cux1P53564 Mapk10-201ENSMUST00000086854 6630 ntAPPRIS ALT1 TSL 1 (best) BASIC7.99□□□□□ -1.13
Cux1P53564 Gm25537-201ENSMUST00000103851 109 ntBASIC7.99□□□□□ -1.13
Cux1P53564 Gm24125-201ENSMUST00000104105 137 ntBASIC7.99□□□□□ -1.13
Cux1P53564 Gm11699-201ENSMUST00000119016 401 ntBASIC7.99□□□□□ -1.13
Cux1P53564 Gm12122-201ENSMUST00000124503 454 ntTSL 1 (best) BASIC7.99□□□□□ -1.13
Cux1P53564 Gm24175-201ENSMUST00000158931 129 ntBASIC7.99□□□□□ -1.13
Cux1P53564 Gm29086-201ENSMUST00000186774 222 ntBASIC7.99□□□□□ -1.13
Cux1P53564 Gm29085-201ENSMUST00000187108 225 ntBASIC7.99□□□□□ -1.13
Cux1P53564 Gm9442-201ENSMUST00000194242 319 ntBASIC7.99□□□□□ -1.13
Cux1P53564 Gm8458-201ENSMUST00000196658 819 ntBASIC7.99□□□□□ -1.13
Cux1P53564 Gm42640-201ENSMUST00000199792 1195 ntBASIC7.99□□□□□ -1.13
Cux1P53564 Gm3816-201ENSMUST00000209803 433 ntBASIC7.99□□□□□ -1.13
Cux1P53564 Gm46327-201ENSMUST00000218240 365 ntBASIC7.99□□□□□ -1.13
Cux1P53564 4933423P22Rik-201ENSMUST00000126219 4595 ntTSL 1 (best) BASIC7.99□□□□□ -1.13
Cux1P53564 Cacna1e-203ENSMUST00000187541 14921 ntAPPRIS P2 TSL 1 (best) BASIC7.99□□□□□ -1.13
Cux1P53564 Fras1-201ENSMUST00000036019 15848 ntAPPRIS P1 TSL 1 (best) BASIC7.99□□□□□ -1.13
Cux1P53564 Map2-203ENSMUST00000114012 5119 ntTSL 1 (best) BASIC7.99□□□□□ -1.13
Cux1P53564 AC152414.1-201ENSMUST00000218784 2287 ntTSL 5 BASIC7.99□□□□□ -1.13
Cux1P53564 AC190403.1-201ENSMUST00000224515 1325 ntBASIC7.99□□□□□ -1.13
Cux1P53564 Pramef6-202ENSMUST00000105767 1967 ntAPPRIS ALT2 TSL 5 BASIC7.99□□□□□ -1.13
Cux1P53564 Gm31218-201ENSMUST00000221181 1498 ntTSL 5 BASIC7.99□□□□□ -1.13
Cux1P53564 Olfr303-204ENSMUST00000215733 3914 ntAPPRIS P1 TSL 5 BASIC7.98□□□□□ -1.13
Cux1P53564 Gm12988-201ENSMUST00000119054 478 ntBASIC7.98□□□□□ -1.13
Cux1P53564 Tmem132cos-202ENSMUST00000154361 699 ntTSL 3 BASIC7.98□□□□□ -1.13
Cux1P53564 Gm23673-201ENSMUST00000157474 298 ntBASIC7.98□□□□□ -1.13
Cux1P53564 Gm17043-201ENSMUST00000164621 1283 ntBASIC7.98□□□□□ -1.13
Cux1P53564 Pkib-209ENSMUST00000177325 540 ntAPPRIS P1 TSL 1 (best) BASIC7.98□□□□□ -1.13
Cux1P53564 Gm27492-201ENSMUST00000185194 187 ntBASIC7.98□□□□□ -1.13
Cux1P53564 Gm4412-201ENSMUST00000186660 433 ntBASIC7.98□□□□□ -1.13
Cux1P53564 Gm29036-201ENSMUST00000189967 877 ntBASIC7.98□□□□□ -1.13
Cux1P53564 Gm32846-201ENSMUST00000205665 842 ntTSL 1 (best) BASIC7.98□□□□□ -1.13
Cux1P53564 B130024G19Rik-205ENSMUST00000207952 485 ntTSL 3 BASIC7.98□□□□□ -1.13
Cux1P53564 Olfr1077-ps1-201ENSMUST00000213225 1212 ntAPPRIS P1 TSL 3 BASIC7.98□□□□□ -1.13
Cux1P53564 9530050K03Rik-201ENSMUST00000221663 1299 ntBASIC7.98□□□□□ -1.13
Cux1P53564 Gm17915-201ENSMUST00000222077 548 ntBASIC7.98□□□□□ -1.13
Cux1P53564 AC241593.2-201ENSMUST00000225099 510 ntBASIC7.98□□□□□ -1.13
Cux1P53564 AC121978.1-201ENSMUST00000228357 380 ntBASIC7.98□□□□□ -1.13
Cux1P53564 Spata19-201ENSMUST00000034473 697 ntAPPRIS P2 TSL 1 (best) BASIC7.98□□□□□ -1.13
Cux1P53564 Gm37181-201ENSMUST00000192513 1727 ntBASIC7.98□□□□□ -1.13
Cux1P53564 Htr2a-201ENSMUST00000036653 5606 ntAPPRIS P1 TSL 1 (best) BASIC7.98□□□□□ -1.13
Cux1P53564 Lrrc4c-202ENSMUST00000135431 3646 ntAPPRIS P1 TSL 1 (best) BASIC7.98□□□□□ -1.13
Cux1P53564 Olfr1346-203ENSMUST00000215302 4525 ntAPPRIS P1 TSL 5 BASIC7.98□□□□□ -1.13
Cux1P53564 Nlrp9b-201ENSMUST00000073151 3346 ntAPPRIS P1 TSL 1 (best) BASIC7.98□□□□□ -1.13
Cux1P53564 AC137871.4-201ENSMUST00000226323 3901 ntBASIC7.98□□□□□ -1.13
Cux1P53564 Birc6-204ENSMUST00000182133 14604 ntAPPRIS ALT2 TSL 5 BASIC7.98□□□□□ -1.13
Cux1P53564 Birc6-215ENSMUST00000182597 14649 ntAPPRIS ALT2 TSL 1 (best) BASIC7.98□□□□□ -1.13
Cux1P53564 Birc6-220ENSMUST00000182944 14610 ntAPPRIS ALT2 TSL 5 BASIC7.98□□□□□ -1.13
Cux1P53564 Anapc10-201ENSMUST00000048147 2801 ntAPPRIS P1 TSL 1 (best) BASIC7.98□□□□□ -1.13
Cux1P53564 Vmn2r1-201ENSMUST00000029406 2739 ntAPPRIS P1 TSL 1 (best) BASIC7.98□□□□□ -1.13
Cux1P53564 Grik1-203ENSMUST00000114137 2894 ntTSL 5 BASIC7.98□□□□□ -1.13
Cux1P53564 Dopey1-201ENSMUST00000034987 8933 ntAPPRIS P1 TSL 5 BASIC7.98□□□□□ -1.13
Cux1P53564 Gabpb2-204ENSMUST00000107209 8357 ntAPPRIS P2 TSL 1 (best) BASIC7.98□□□□□ -1.13
Cux1P53564 Cntnap5b-201ENSMUST00000086738 4027 ntAPPRIS P1 TSL 2 BASIC7.98□□□□□ -1.13
Cux1P53564 Pole-201ENSMUST00000007296 7163 ntAPPRIS P1 TSL 1 (best) BASIC7.98□□□□□ -1.13
Cux1P53564 Macrod2-203ENSMUST00000110061 887 ntTSL 1 (best) BASIC7.98□□□□□ -1.13
Cux1P53564 Gm15390-201ENSMUST00000120323 738 ntBASIC7.98□□□□□ -1.13
Cux1P53564 Gm15735-201ENSMUST00000136187 514 ntTSL 3 BASIC7.98□□□□□ -1.13
Cux1P53564 1810065E05Rik-201ENSMUST00000013797 926 ntAPPRIS P1 TSL 1 (best) BASIC7.98□□□□□ -1.13
Cux1P53564 Gm16285-201ENSMUST00000162999 347 ntBASIC7.98□□□□□ -1.13
Cux1P53564 Mir6926-201ENSMUST00000184562 68 ntBASIC7.98□□□□□ -1.13
Cux1P53564 1700072G22Rik-201ENSMUST00000189460 548 ntTSL 1 (best) BASIC7.98□□□□□ -1.13
Cux1P53564 Gm20940-201ENSMUST00000197308 360 ntBASIC7.98□□□□□ -1.13
Cux1P53564 Gm5750-201ENSMUST00000218711 801 ntBASIC7.98□□□□□ -1.13
Cux1P53564 Gm1000-201ENSMUST00000220520 801 ntTSL 3 BASIC7.98□□□□□ -1.13
Cux1P53564 Fam24a-201ENSMUST00000084505 371 ntAPPRIS P1 TSL 1 (best) BASIC7.98□□□□□ -1.13
Cux1P53564 Rlf-203ENSMUST00000168615 6585 ntAPPRIS ALT2 TSL 5 BASIC7.98□□□□□ -1.13
Cux1P53564 Gm45311-201ENSMUST00000211086 1330 ntBASIC7.97□□□□□ -1.13
Cux1P53564 Gm37485-201ENSMUST00000192326 2953 ntBASIC7.97□□□□□ -1.13
Cux1P53564 Ktn1-203ENSMUST00000185940 3869 ntAPPRIS ALT2 TSL 5 BASIC7.97□□□□□ -1.13
Cux1P53564 Ktn1-208ENSMUST00000187039 3875 ntAPPRIS ALT2 TSL 5 BASIC7.97□□□□□ -1.13
Cux1P53564 Postn-204ENSMUST00000117373 3121 ntAPPRIS ALT2 TSL 1 (best) BASIC7.97□□□□□ -1.13
Cux1P53564 Gm37769-201ENSMUST00000193753 2369 ntBASIC7.97□□□□□ -1.13
Cux1P53564 Fgb-201ENSMUST00000048246 3810 ntAPPRIS P1 TSL 1 (best) BASIC7.97□□□□□ -1.13
Cux1P53564 Gm9077-201ENSMUST00000210657 2298 ntBASIC7.97□□□□□ -1.13
Cux1P53564 AC125095.1-201ENSMUST00000228387 2020 ntBASIC7.97□□□□□ -1.13
Cux1P53564 Zfp568-202ENSMUST00000146074 6867 ntAPPRIS ALT2 TSL 1 (best) BASIC7.97□□□□□ -1.13
Cux1P53564 Crls1-204ENSMUST00000124836 1267 ntTSL 1 (best) BASIC7.97□□□□□ -1.13
Cux1P53564 Gm14664-201ENSMUST00000142919 437 ntTSL 3 BASIC7.97□□□□□ -1.13
Cux1P53564 Mllt3-207ENSMUST00000148059 422 ntTSL 5 BASIC7.97□□□□□ -1.13
Cux1P53564 Gm22804-201ENSMUST00000158052 101 ntBASIC7.97□□□□□ -1.13
Cux1P53564 Gm28116-201ENSMUST00000189064 387 ntBASIC7.97□□□□□ -1.13
Cux1P53564 Olfr416-ps1-201ENSMUST00000192734 804 ntBASIC7.97□□□□□ -1.13
Retrieved 100 of 76,532 protein–RNA pairs in 91.4 ms