Protein–RNA interactions for Protein: P48377

Rfx1, MHC class II regulatory factor RFX1, mousemouse

Predictions only

Length 963 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfx1P48377 Galntl6-207ENSMUST00000204067 1592 ntTSL 1 (best) BASIC7.45□□□□□ -1.22
Rfx1P48377 Gm14324-201ENSMUST00000121358 3051 ntBASIC7.45□□□□□ -1.22
Rfx1P48377 Gm37607-201ENSMUST00000194925 2623 ntBASIC7.45□□□□□ -1.22
Rfx1P48377 Zfp420-201ENSMUST00000057652 2744 ntAPPRIS P1 TSL 1 (best) BASIC7.44□□□□□ -1.22
Rfx1P48377 CT009480.3-201ENSMUST00000224051 3032 ntBASIC7.44□□□□□ -1.22
Rfx1P48377 AC131687.1-201ENSMUST00000225931 5446 ntBASIC7.44□□□□□ -1.22
Rfx1P48377 Gm20707-201ENSMUST00000176201 2516 ntTSL 1 (best) BASIC7.44□□□□□ -1.22
Rfx1P48377 Gm45424-201ENSMUST00000210575 3300 ntBASIC7.44□□□□□ -1.22
Rfx1P48377 Svs2-202ENSMUST00000109374 1479 ntAPPRIS P1 TSL 1 (best) BASIC7.44□□□□□ -1.22
Rfx1P48377 Bmpr1b-204ENSMUST00000106232 4164 ntAPPRIS P1 TSL 1 (best) BASIC7.44□□□□□ -1.22
Rfx1P48377 Olfr39-202ENSMUST00000212983 2028 ntAPPRIS P1 TSL 2 BASIC7.44□□□□□ -1.22
Rfx1P48377 Rsrc2-203ENSMUST00000111515 4223 ntTSL 5 BASIC7.44□□□□□ -1.22
Rfx1P48377 Gm43363-201ENSMUST00000201590 2647 ntBASIC7.44□□□□□ -1.22
Rfx1P48377 Nt5c3-202ENSMUST00000101367 1519 ntAPPRIS ALT1 TSL 1 (best) BASIC7.44□□□□□ -1.22
Rfx1P48377 Rgs13-202ENSMUST00000111941 1545 ntAPPRIS P1 TSL 1 (best) BASIC7.44□□□□□ -1.22
Rfx1P48377 Amz2-201ENSMUST00000020929 1811 ntAPPRIS ALT2 TSL 2 BASIC7.44□□□□□ -1.22
Rfx1P48377 Ap5m1-208ENSMUST00000228238 3514 ntBASIC7.44□□□□□ -1.22
Rfx1P48377 Traj40-201ENSMUST00000103702 61 ntAPPRIS P1 BASIC7.44□□□□□ -1.22
Rfx1P48377 Gm24888-201ENSMUST00000104387 130 ntBASIC7.44□□□□□ -1.22
Rfx1P48377 Gm14180-201ENSMUST00000105066 78 ntAPPRIS P1 BASIC7.44□□□□□ -1.22
Rfx1P48377 Scimp-202ENSMUST00000108534 1080 ntAPPRIS P1 TSL 1 (best) BASIC7.44□□□□□ -1.22
Rfx1P48377 Gm14981-201ENSMUST00000117325 943 ntBASIC7.44□□□□□ -1.22
Rfx1P48377 Gm14082-201ENSMUST00000118582 801 ntBASIC7.44□□□□□ -1.22
Rfx1P48377 Gm13455-201ENSMUST00000118767 517 ntBASIC7.44□□□□□ -1.22
Rfx1P48377 Gm14211-201ENSMUST00000152250 408 ntTSL 3 BASIC7.44□□□□□ -1.22
Rfx1P48377 E130111B04Rik-201ENSMUST00000156781 450 ntTSL 1 (best) BASIC7.44□□□□□ -1.22
Rfx1P48377 Gm17631-201ENSMUST00000171980 69 ntAPPRIS P1 TSL 5 BASIC7.44□□□□□ -1.22
Rfx1P48377 Gm22646-201ENSMUST00000175130 115 ntBASIC7.44□□□□□ -1.22
Rfx1P48377 Gm18953-201ENSMUST00000175694 300 ntBASIC7.44□□□□□ -1.22
Rfx1P48377 Gm21809-201ENSMUST00000178495 468 ntBASIC7.44□□□□□ -1.22
Rfx1P48377 Gm17467-201ENSMUST00000178553 468 ntAPPRIS P1 BASIC7.44□□□□□ -1.22
Rfx1P48377 Gm17412-201ENSMUST00000179261 468 ntBASIC7.44□□□□□ -1.22
Rfx1P48377 Gm17577-201ENSMUST00000179916 468 ntAPPRIS P1 BASIC7.44□□□□□ -1.22
Rfx1P48377 Gm23379-201ENSMUST00000180026 107 ntBASIC7.44□□□□□ -1.22
Rfx1P48377 Gm29086-201ENSMUST00000186774 222 ntBASIC7.44□□□□□ -1.22
Rfx1P48377 Gm29085-201ENSMUST00000187108 225 ntBASIC7.44□□□□□ -1.22
Rfx1P48377 Gm37637-201ENSMUST00000195540 1256 ntBASIC7.44□□□□□ -1.22
Rfx1P48377 Gm43241-201ENSMUST00000198375 364 ntTSL 3 BASIC7.44□□□□□ -1.22
Rfx1P48377 Gm42804-201ENSMUST00000199701 178 ntBASIC7.44□□□□□ -1.22
Rfx1P48377 Gm33586-201ENSMUST00000210768 892 ntTSL 3 BASIC7.44□□□□□ -1.22
Rfx1P48377 Gm45830-201ENSMUST00000212945 344 ntTSL 5 BASIC7.44□□□□□ -1.22
Rfx1P48377 Glipr1l3-201ENSMUST00000220085 892 ntAPPRIS P1 TSL 5 BASIC7.44□□□□□ -1.22
Rfx1P48377 CR974592.1-201ENSMUST00000220422 574 ntBASIC7.44□□□□□ -1.22
Rfx1P48377 Gm35890-201ENSMUST00000221195 564 ntTSL 5 BASIC7.44□□□□□ -1.22
Rfx1P48377 Gm19154-201ENSMUST00000223330 940 ntBASIC7.44□□□□□ -1.22
Rfx1P48377 AC091783.2-201ENSMUST00000224626 740 ntBASIC7.44□□□□□ -1.22
Rfx1P48377 AC132260.1-201ENSMUST00000225499 734 ntBASIC7.44□□□□□ -1.22
Rfx1P48377 Olfr11-201ENSMUST00000043081 942 ntAPPRIS P1 BASIC7.44□□□□□ -1.22
Rfx1P48377 Gm4894-201ENSMUST00000067007 357 ntAPPRIS P1 TSL 5 BASIC7.44□□□□□ -1.22
Rfx1P48377 Vmn1r78-201ENSMUST00000078039 942 ntAPPRIS P1 BASIC7.44□□□□□ -1.22
Rfx1P48377 Olfr382-201ENSMUST00000092921 939 ntAPPRIS P1 BASIC7.44□□□□□ -1.22
Rfx1P48377 Vdac3-ps1-201ENSMUST00000099736 853 ntBASIC7.44□□□□□ -1.22
Rfx1P48377 Zranb2-202ENSMUST00000106057 2737 ntAPPRIS ALT2 TSL 5 BASIC7.44□□□□□ -1.22
Rfx1P48377 Vmn1r12-203ENSMUST00000227581 6490 ntAPPRIS ALT2 BASIC7.44□□□□□ -1.22
Rfx1P48377 P2ry13-201ENSMUST00000040622 2528 ntAPPRIS P1 TSL 1 (best) BASIC7.44□□□□□ -1.22
Rfx1P48377 Cnga1-204ENSMUST00000169997 2251 ntAPPRIS P1 TSL 5 BASIC7.44□□□□□ -1.22
Rfx1P48377 Scn2a-202ENSMUST00000100067 8690 ntAPPRIS P3 TSL 5 BASIC7.44□□□□□ -1.22
Rfx1P48377 Fcgr2b-201ENSMUST00000027966 3544 ntAPPRIS P4 TSL 1 (best) BASIC7.44□□□□□ -1.22
Rfx1P48377 Fmn1-202ENSMUST00000099576 11817 ntAPPRIS ALT2 TSL 5 BASIC7.44□□□□□ -1.22
Rfx1P48377 Vmn1r203-203ENSMUST00000228889 8213 ntAPPRIS P1 BASIC7.44□□□□□ -1.22
Rfx1P48377 Gm156-202ENSMUST00000118532 2000 ntTSL 1 (best) BASIC7.44□□□□□ -1.22
Rfx1P48377 Enpp2-202ENSMUST00000167541 2664 ntAPPRIS ALT1 TSL 1 (best) BASIC7.44□□□□□ -1.22
Rfx1P48377 Serpinb11-201ENSMUST00000027566 2084 ntAPPRIS P1 TSL 1 (best) BASIC7.43□□□□□ -1.22
Rfx1P48377 Gm38811-201ENSMUST00000203781 3478 ntTSL 1 (best) BASIC7.43□□□□□ -1.22
Rfx1P48377 2700049A03Rik-201ENSMUST00000045907 4507 ntAPPRIS ALT2 TSL 1 (best) BASIC7.43□□□□□ -1.22
Rfx1P48377 Gm43386-201ENSMUST00000199654 4001 ntBASIC7.43□□□□□ -1.22
Rfx1P48377 Lrrtm4-206ENSMUST00000136421 4435 ntTSL 1 (best) BASIC7.43□□□□□ -1.22
Rfx1P48377 Gm25396-201ENSMUST00000103981 133 ntBASIC7.43□□□□□ -1.22
Rfx1P48377 Gm11146-201ENSMUST00000114231 96 ntAPPRIS P1 TSL 5 BASIC7.43□□□□□ -1.22
Rfx1P48377 Olfr475-ps1-201ENSMUST00000117982 932 ntAPPRIS P1 BASIC7.43□□□□□ -1.22
Rfx1P48377 Gm11984-201ENSMUST00000118142 766 ntBASIC7.43□□□□□ -1.22
Rfx1P48377 Gm14794-201ENSMUST00000118181 192 ntBASIC7.43□□□□□ -1.22
Rfx1P48377 Gm11990-201ENSMUST00000121505 897 ntBASIC7.43□□□□□ -1.22
Rfx1P48377 Gm13738-201ENSMUST00000122437 469 ntBASIC7.43□□□□□ -1.22
Rfx1P48377 Gm13335-201ENSMUST00000129994 471 ntTSL 1 (best) BASIC7.43□□□□□ -1.22
Rfx1P48377 Gm26349-201ENSMUST00000157530 130 ntBASIC7.43□□□□□ -1.22
Rfx1P48377 Gm22604-201ENSMUST00000157604 311 ntBASIC7.43□□□□□ -1.22
Rfx1P48377 Gm25048-201ENSMUST00000158598 91 ntBASIC7.43□□□□□ -1.22
Rfx1P48377 Ear-ps7-201ENSMUST00000161287 442 ntBASIC7.43□□□□□ -1.22
Rfx1P48377 1700091H14Rik-201ENSMUST00000167772 590 ntBASIC7.43□□□□□ -1.22
Rfx1P48377 Gm24157-201ENSMUST00000175265 111 ntBASIC7.43□□□□□ -1.22
Rfx1P48377 Vmn1r-ps51-201ENSMUST00000175667 320 ntBASIC7.43□□□□□ -1.22
Rfx1P48377 Gm11392-201ENSMUST00000181419 710 ntBASIC7.43□□□□□ -1.22
Rfx1P48377 Ranbp2-ps8-201ENSMUST00000183723 345 ntBASIC7.43□□□□□ -1.22
Rfx1P48377 Gm28289-201ENSMUST00000189331 315 ntTSL 5 BASIC7.43□□□□□ -1.22
Rfx1P48377 Gm43546-201ENSMUST00000196721 943 ntBASIC7.43□□□□□ -1.22
Rfx1P48377 Gm43203-201ENSMUST00000200130 558 ntBASIC7.43□□□□□ -1.22
Rfx1P48377 Gm8930-201ENSMUST00000201693 768 ntBASIC7.43□□□□□ -1.22
Rfx1P48377 Gm42713-201ENSMUST00000202709 945 ntBASIC7.43□□□□□ -1.22
Rfx1P48377 Gm44091-201ENSMUST00000205212 649 ntBASIC7.43□□□□□ -1.22
Rfx1P48377 Gm45136-201ENSMUST00000205793 943 ntBASIC7.43□□□□□ -1.22
Rfx1P48377 Olfr1479-ps1-201ENSMUST00000207752 382 ntBASIC7.43□□□□□ -1.22
Rfx1P48377 Olfr1295-202ENSMUST00000207786 1043 ntAPPRIS P1 BASIC7.43□□□□□ -1.22
Rfx1P48377 Gm44787-202ENSMUST00000208339 1069 ntTSL 5 BASIC7.43□□□□□ -1.22
Rfx1P48377 Gm9685-201ENSMUST00000211275 538 ntBASIC7.43□□□□□ -1.22
Rfx1P48377 Olfr151-201ENSMUST00000211893 1128 ntAPPRIS P1 BASIC7.43□□□□□ -1.22
Rfx1P48377 Gm7530-201ENSMUST00000218466 605 ntBASIC7.43□□□□□ -1.22
Rfx1P48377 4930448C13Rik-204ENSMUST00000221610 1044 ntTSL 5 BASIC7.43□□□□□ -1.22
Rfx1P48377 Prl2c2-203ENSMUST00000221612 596 ntTSL 1 (best) BASIC7.43□□□□□ -1.22
Rfx1P48377 4930453C13Rik-201ENSMUST00000222376 765 ntTSL 1 (best) BASIC7.43□□□□□ -1.22
Retrieved 100 of 76,532 protein–RNA pairs in 80.2 ms