Protein–RNA interactions for Protein: P43241

Cdx2, Homeobox protein CDX-2, mousemouse

Predictions only

Length 311 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdx2P43241 Gabrp-201ENSMUST00000020366 3280 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.59
Cdx2P43241 Gm42662-201ENSMUST00000202539 1431 ntBASIC5.09□□□□□ -1.59
Cdx2P43241 AC117608.2-201ENSMUST00000224124 1363 ntBASIC5.09□□□□□ -1.59
Cdx2P43241 Gria4-204ENSMUST00000212533 5207 ntAPPRIS ALT1 TSL 1 (best) BASIC5.09□□□□□ -1.59
Cdx2P43241 Igkv10-94-201ENSMUST00000103330 347 ntAPPRIS P1 BASIC5.09□□□□□ -1.59
Cdx2P43241 Gm11278-201ENSMUST00000121002 997 ntBASIC5.09□□□□□ -1.59
Cdx2P43241 n-R5s174-201ENSMUST00000122638 121 ntBASIC5.09□□□□□ -1.59
Cdx2P43241 Gm13838-201ENSMUST00000132130 531 ntTSL 5 BASIC5.09□□□□□ -1.59
Cdx2P43241 Smdt1-202ENSMUST00000159054 294 ntTSL 5 BASIC5.09□□□□□ -1.59
Cdx2P43241 Gng2-206ENSMUST00000162425 393 ntAPPRIS P1 TSL 3 BASIC5.09□□□□□ -1.59
Cdx2P43241 Gm6872-201ENSMUST00000165001 700 ntBASIC5.09□□□□□ -1.59
Cdx2P43241 Gm16430-202ENSMUST00000178145 703 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.59
Cdx2P43241 Gm16405-202ENSMUST00000180150 703 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.59
Cdx2P43241 Gm26962-201ENSMUST00000182545 265 ntTSL 3 BASIC5.09□□□□□ -1.59
Cdx2P43241 Mir6943-201ENSMUST00000185186 66 ntBASIC5.09□□□□□ -1.59
Cdx2P43241 Scgb3a2-202ENSMUST00000187157 550 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.59
Cdx2P43241 Gm19124-201ENSMUST00000191041 832 ntBASIC5.09□□□□□ -1.59
Cdx2P43241 Ighv6-2-201ENSMUST00000192430 295 ntBASIC5.09□□□□□ -1.59
Cdx2P43241 Gm37445-201ENSMUST00000195318 242 ntBASIC5.09□□□□□ -1.59
Cdx2P43241 Gm36548-201ENSMUST00000197473 685 ntTSL 5 BASIC5.09□□□□□ -1.59
Cdx2P43241 Gm42776-201ENSMUST00000198031 406 ntBASIC5.09□□□□□ -1.59
Cdx2P43241 1700001N15Rik-201ENSMUST00000199380 482 ntTSL 1 (best) BASIC5.09□□□□□ -1.59
Cdx2P43241 Gm45422-201ENSMUST00000211476 246 ntBASIC5.09□□□□□ -1.59
Cdx2P43241 Olfr151-202ENSMUST00000221099 929 ntBASIC5.09□□□□□ -1.59
Cdx2P43241 AC173482.3-201ENSMUST00000225492 1212 ntBASIC5.09□□□□□ -1.59
Cdx2P43241 Olfr148-201ENSMUST00000050807 1017 ntAPPRIS P1 BASIC5.09□□□□□ -1.59
Cdx2P43241 Gm20707-201ENSMUST00000176201 2516 ntTSL 1 (best) BASIC5.09□□□□□ -1.59
Cdx2P43241 Trim5-202ENSMUST00000098179 3655 ntAPPRIS P2 TSL 1 (best) BASIC5.09□□□□□ -1.59
Cdx2P43241 B530045E10Rik-204ENSMUST00000220146 3244 ntTSL 1 (best) BASIC5.09□□□□□ -1.59
Cdx2P43241 Tlr13-201ENSMUST00000040065 4060 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.6
Cdx2P43241 Olfr1215-203ENSMUST00000216271 2608 ntAPPRIS P1 TSL 3 BASIC5.09□□□□□ -1.6
Cdx2P43241 Lrp2bp-203ENSMUST00000110381 3421 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.6
Cdx2P43241 Alkbh8-204ENSMUST00000211933 7674 ntAPPRIS P2 TSL 1 (best) BASIC5.09□□□□□ -1.6
Cdx2P43241 Clec2g-203ENSMUST00000142388 2404 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
Cdx2P43241 Tet1-206ENSMUST00000174189 14369 ntAPPRIS ALT2 TSL 5 BASIC5.08□□□□□ -1.6
Cdx2P43241 Gm29098-201ENSMUST00000186104 1498 ntTSL 5 BASIC5.08□□□□□ -1.6
Cdx2P43241 Gm28130-201ENSMUST00000186321 1498 ntTSL 5 BASIC5.08□□□□□ -1.6
Cdx2P43241 Gm28089-202ENSMUST00000187266 1498 ntTSL 5 BASIC5.08□□□□□ -1.6
Cdx2P43241 Gm29204-202ENSMUST00000187384 1498 ntTSL 5 BASIC5.08□□□□□ -1.6
Cdx2P43241 Gm28753-201ENSMUST00000187804 1498 ntTSL 5 BASIC5.08□□□□□ -1.6
Cdx2P43241 Gm28518-203ENSMUST00000188788 1498 ntTSL 5 BASIC5.08□□□□□ -1.6
Cdx2P43241 Gm28488-203ENSMUST00000188792 1498 ntTSL 5 BASIC5.08□□□□□ -1.6
Cdx2P43241 Gm29131-202ENSMUST00000189485 1498 ntTSL 5 BASIC5.08□□□□□ -1.6
Cdx2P43241 Gm28284-202ENSMUST00000190221 1498 ntTSL 5 BASIC5.08□□□□□ -1.6
Cdx2P43241 Gm28764-203ENSMUST00000191194 1498 ntTSL 5 BASIC5.08□□□□□ -1.6
Cdx2P43241 Senp7-203ENSMUST00000089362 4825 ntAPPRIS P2 TSL 1 (best) BASIC5.08□□□□□ -1.6
Cdx2P43241 4933439N06Rik-201ENSMUST00000203062 1365 ntBASIC5.08□□□□□ -1.6
Cdx2P43241 C230099D08Rik-201ENSMUST00000215772 2727 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
Cdx2P43241 Gm38372-201ENSMUST00000194854 4028 ntBASIC5.08□□□□□ -1.6
Cdx2P43241 Gm39327-201ENSMUST00000213594 1982 ntTSL 5 BASIC5.08□□□□□ -1.6
Cdx2P43241 Dgkk-201ENSMUST00000067410 7155 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
Cdx2P43241 Olfr1036-201ENSMUST00000164985 3203 ntAPPRIS P1 BASIC5.08□□□□□ -1.6
Cdx2P43241 Kmt2d-202ENSMUST00000178486 19805 ntAPPRIS ALT2 TSL 5 BASIC5.08□□□□□ -1.6
Cdx2P43241 Mup6-201ENSMUST00000107517 926 ntAPPRIS P1 TSL 5 BASIC5.08□□□□□ -1.6
Cdx2P43241 Psmb6-ps-201ENSMUST00000117520 713 ntBASIC5.08□□□□□ -1.6
Cdx2P43241 Cyp2j14-ps-201ENSMUST00000117776 361 ntBASIC5.08□□□□□ -1.6
Cdx2P43241 Gm12422-201ENSMUST00000121431 302 ntBASIC5.08□□□□□ -1.6
Cdx2P43241 Gm23534-201ENSMUST00000157539 97 ntBASIC5.08□□□□□ -1.6
Cdx2P43241 I0C0044D17Rik-202ENSMUST00000168045 510 ntAPPRIS P1 BASIC5.08□□□□□ -1.6
Cdx2P43241 Gm29093-201ENSMUST00000187366 409 ntTSL 5 BASIC5.08□□□□□ -1.6
Cdx2P43241 6430511E19Rik-201ENSMUST00000192772 3835 ntBASIC5.08□□□□□ -1.6
Cdx2P43241 AC174780.1-201ENSMUST00000199415 1107 ntBASIC5.08□□□□□ -1.6
Cdx2P43241 Gm43629-201ENSMUST00000201782 704 ntBASIC5.08□□□□□ -1.6
Cdx2P43241 Gm3279-201ENSMUST00000203099 1092 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
Cdx2P43241 Gm44108-201ENSMUST00000203525 422 ntBASIC5.08□□□□□ -1.6
Cdx2P43241 Gm44952-201ENSMUST00000204443 433 ntBASIC5.08□□□□□ -1.6
Cdx2P43241 Gm45032-201ENSMUST00000205375 520 ntBASIC5.08□□□□□ -1.6
Cdx2P43241 Gm45305-201ENSMUST00000209799 815 ntTSL 5 BASIC5.08□□□□□ -1.6
Cdx2P43241 Gm31698-202ENSMUST00000214385 527 ntTSL 5 BASIC5.08□□□□□ -1.6
Cdx2P43241 2900078I11Rik-201ENSMUST00000214556 999 ntBASIC5.08□□□□□ -1.6
Cdx2P43241 9430078K24Rik-202ENSMUST00000219857 348 ntTSL 3 BASIC5.08□□□□□ -1.6
Cdx2P43241 1700020D12Rik-201ENSMUST00000221140 426 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
Cdx2P43241 Ang5-201ENSMUST00000066719 700 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
Cdx2P43241 Gm24763-201ENSMUST00000083688 190 ntBASIC5.08□□□□□ -1.6
Cdx2P43241 Adam6b-201ENSMUST00000063317 2547 ntAPPRIS P1 BASIC5.08□□□□□ -1.6
Cdx2P43241 Vmn1r90-206ENSMUST00000227566 6901 ntAPPRIS ALT2 BASIC5.08□□□□□ -1.6
Cdx2P43241 Rfx6-201ENSMUST00000050455 3088 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
Cdx2P43241 Rmi1-204ENSMUST00000225815 2447 ntAPPRIS P1 BASIC5.08□□□□□ -1.6
Cdx2P43241 Gm42798-201ENSMUST00000200853 3972 ntBASIC5.08□□□□□ -1.6
Cdx2P43241 Gm26791-201ENSMUST00000180942 1605 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
Cdx2P43241 AC152944.1-201ENSMUST00000220160 3101 ntBASIC5.08□□□□□ -1.6
Cdx2P43241 Gm9314-201ENSMUST00000199881 1528 ntBASIC5.07□□□□□ -1.6
Cdx2P43241 Mme-205ENSMUST00000194134 8039 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
Cdx2P43241 Ankrd34c-201ENSMUST00000060700 5457 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
Cdx2P43241 Matr3-ps2-201ENSMUST00000160839 1996 ntBASIC5.07□□□□□ -1.6
Cdx2P43241 Gm5925-201ENSMUST00000105016 1497 ntBASIC5.07□□□□□ -1.6
Cdx2P43241 Fbxw25-201ENSMUST00000163839 1490 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
Cdx2P43241 Gm21269-201ENSMUST00000206521 12456 ntTSL 3 BASIC5.07□□□□□ -1.6
Cdx2P43241 Zkscan8-204ENSMUST00000224362 6954 ntAPPRIS ALT2 BASIC5.07□□□□□ -1.6
Cdx2P43241 Olfr753-ps1-203ENSMUST00000208970 2764 ntAPPRIS P1 TSL 5 BASIC5.07□□□□□ -1.6
Cdx2P43241 Gm44530-201ENSMUST00000207920 3559 ntBASIC5.07□□□□□ -1.6
Cdx2P43241 Homer2-202ENSMUST00000098326 10982 ntTSL 5 BASIC5.07□□□□□ -1.6
Cdx2P43241 Scimp-202ENSMUST00000108534 1080 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
Cdx2P43241 Rps12-ps26-201ENSMUST00000117751 333 ntBASIC5.07□□□□□ -1.6
Cdx2P43241 Gm3931-201ENSMUST00000119038 455 ntBASIC5.07□□□□□ -1.6
Cdx2P43241 Olfr360-201ENSMUST00000120704 954 ntAPPRIS P1 BASIC5.07□□□□□ -1.6
Cdx2P43241 Gm14125-202ENSMUST00000120921 756 ntBASIC5.07□□□□□ -1.6
Cdx2P43241 Gm13149-201ENSMUST00000122071 339 ntBASIC5.07□□□□□ -1.6
Cdx2P43241 Gm24628-201ENSMUST00000122761 289 ntBASIC5.07□□□□□ -1.6
Cdx2P43241 2210408F21Rik-203ENSMUST00000133510 429 ntTSL 3 BASIC5.07□□□□□ -1.6
Retrieved 100 of 76,532 protein–RNA pairs in 70.1 ms