Protein–RNA interactions for Protein: P40224

Cxcl12, Stromal cell-derived factor 1, mousemouse

Predictions only

Length 93 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cxcl12P40224 Gm12110-201ENSMUST00000121601 579 ntBASIC5.48□□□□□ -1.53
Cxcl12P40224 Gm23023-201ENSMUST00000158767 109 ntBASIC5.48□□□□□ -1.53
Cxcl12P40224 Gm16589-201ENSMUST00000159522 918 ntBASIC5.48□□□□□ -1.53
Cxcl12P40224 Gm16451-201ENSMUST00000173484 924 ntAPPRIS P1 BASIC5.48□□□□□ -1.53
Cxcl12P40224 Vmn1r-ps52-201ENSMUST00000177426 862 ntBASIC5.48□□□□□ -1.53
Cxcl12P40224 Mir6907-201ENSMUST00000183764 71 ntBASIC5.48□□□□□ -1.53
Cxcl12P40224 Gm29638-201ENSMUST00000186106 371 ntTSL 3 BASIC5.48□□□□□ -1.53
Cxcl12P40224 Gm29538-201ENSMUST00000190783 471 ntTSL 2 BASIC5.48□□□□□ -1.53
Cxcl12P40224 Gm38040-201ENSMUST00000193505 225 ntBASIC5.48□□□□□ -1.53
Cxcl12P40224 Gm43678-201ENSMUST00000197774 328 ntTSL 3 BASIC5.48□□□□□ -1.53
Cxcl12P40224 Gm4602-201ENSMUST00000203198 308 ntBASIC5.48□□□□□ -1.53
Cxcl12P40224 Olfr442-ps1-201ENSMUST00000204261 316 ntBASIC5.48□□□□□ -1.53
Cxcl12P40224 Gm18205-201ENSMUST00000209215 841 ntBASIC5.48□□□□□ -1.53
Cxcl12P40224 Gm7128-201ENSMUST00000211639 533 ntBASIC5.48□□□□□ -1.53
Cxcl12P40224 Gm2059-201ENSMUST00000212025 287 ntBASIC5.48□□□□□ -1.53
Cxcl12P40224 4930567H12Rik-202ENSMUST00000212512 766 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
Cxcl12P40224 Nsa2-203ENSMUST00000225410 974 ntBASIC5.48□□□□□ -1.53
Cxcl12P40224 4930583I09Rik-201ENSMUST00000024896 630 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
Cxcl12P40224 Gm16442-201ENSMUST00000079099 924 ntAPPRIS P1 BASIC5.48□□□□□ -1.53
Cxcl12P40224 Prl3d1-201ENSMUST00000082079 872 ntAPPRIS ALT2 TSL 1 (best) BASIC5.48□□□□□ -1.53
Cxcl12P40224 Olfr878-201ENSMUST00000086061 1065 ntBASIC5.48□□□□□ -1.53
Cxcl12P40224 AC141438.1-201ENSMUST00000216055 3205 ntTSL 2 BASIC5.48□□□□□ -1.53
Cxcl12P40224 Vmn1r220-203ENSMUST00000227679 7868 ntAPPRIS P1 BASIC5.48□□□□□ -1.53
Cxcl12P40224 Vmn1r220-206ENSMUST00000228854 7854 ntAPPRIS P1 BASIC5.48□□□□□ -1.53
Cxcl12P40224 Ptprj-202ENSMUST00000111495 4197 ntAPPRIS ALT2 TSL 1 (best) BASIC5.48□□□□□ -1.53
Cxcl12P40224 Gm3896-201ENSMUST00000176020 4094 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
Cxcl12P40224 Cdh8-201ENSMUST00000093249 3790 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
Cxcl12P40224 Trim24-202ENSMUST00000120238 3258 ntAPPRIS ALT2 TSL 1 (best) BASIC5.48□□□□□ -1.53
Cxcl12P40224 AC154755.2-201ENSMUST00000224384 2857 ntBASIC5.48□□□□□ -1.53
Cxcl12P40224 Gm45235-201ENSMUST00000208016 4465 ntBASIC5.48□□□□□ -1.53
Cxcl12P40224 Vamp4-207ENSMUST00000155003 1428 ntAPPRIS P1 TSL 3 BASIC5.48□□□□□ -1.53
Cxcl12P40224 Vmn1r52-204ENSMUST00000227578 2370 ntBASIC5.48□□□□□ -1.53
Cxcl12P40224 Egfros-201ENSMUST00000150329 4063 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
Cxcl12P40224 Ptbp3-212ENSMUST00000174586 6640 ntAPPRIS ALT2 TSL 5 BASIC5.48□□□□□ -1.53
Cxcl12P40224 Gm26893-202ENSMUST00000180965 2079 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
Cxcl12P40224 Gm26552-202ENSMUST00000180980 2079 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
Cxcl12P40224 Gm5886-203ENSMUST00000203983 2613 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
Cxcl12P40224 Cd180-204ENSMUST00000171267 1787 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
Cxcl12P40224 Olfr1305-203ENSMUST00000213737 1775 ntAPPRIS P1 TSL 5 BASIC5.47□□□□□ -1.53
Cxcl12P40224 Prg4-208ENSMUST00000164600 4263 ntAPPRIS P1 TSL 5 BASIC5.47□□□□□ -1.53
Cxcl12P40224 Trps1-203ENSMUST00000183421 3446 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
Cxcl12P40224 Gm44660-201ENSMUST00000207134 2465 ntBASIC5.47□□□□□ -1.53
Cxcl12P40224 Dnah3-204ENSMUST00000209154 12265 ntAPPRIS P5 TSL 5 BASIC5.47□□□□□ -1.53
Cxcl12P40224 Pus10-201ENSMUST00000020520 1813 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
Cxcl12P40224 Gm14304-201ENSMUST00000117272 446 ntBASIC5.47□□□□□ -1.53
Cxcl12P40224 Gm12520-201ENSMUST00000117493 316 ntBASIC5.47□□□□□ -1.53
Cxcl12P40224 Gm11878-201ENSMUST00000117908 400 ntBASIC5.47□□□□□ -1.53
Cxcl12P40224 Gm7657-201ENSMUST00000118851 666 ntBASIC5.47□□□□□ -1.53
Cxcl12P40224 Gm24444-201ENSMUST00000157244 308 ntBASIC5.47□□□□□ -1.53
Cxcl12P40224 Gm16132-201ENSMUST00000159296 598 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
Cxcl12P40224 Gm7271-201ENSMUST00000172369 519 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
Cxcl12P40224 Aste1-207ENSMUST00000176940 1151 ntAPPRIS ALT2 TSL 5 BASIC5.47□□□□□ -1.53
Cxcl12P40224 Mir6391-201ENSMUST00000184391 104 ntBASIC5.47□□□□□ -1.53
Cxcl12P40224 Gm27148-201ENSMUST00000185086 160 ntBASIC5.47□□□□□ -1.53
Cxcl12P40224 Gm6717-201ENSMUST00000185549 838 ntBASIC5.47□□□□□ -1.53
Cxcl12P40224 Gm28064-201ENSMUST00000185639 858 ntBASIC5.47□□□□□ -1.53
Cxcl12P40224 Mrgprb9-ps-201ENSMUST00000188739 892 ntBASIC5.47□□□□□ -1.53
Cxcl12P40224 Gm37336-202ENSMUST00000193705 468 ntBASIC5.47□□□□□ -1.53
Cxcl12P40224 D030025E07Rik-204ENSMUST00000198275 653 ntTSL 3 BASIC5.47□□□□□ -1.53
Cxcl12P40224 Gm6366-201ENSMUST00000198766 826 ntBASIC5.47□□□□□ -1.53
Cxcl12P40224 Gm39363-201ENSMUST00000214251 723 ntTSL 3 BASIC5.47□□□□□ -1.53
Cxcl12P40224 AC124420.1-201ENSMUST00000219779 791 ntBASIC5.47□□□□□ -1.53
Cxcl12P40224 AC158523.2-201ENSMUST00000222708 548 ntBASIC5.47□□□□□ -1.53
Cxcl12P40224 3830408C21Rik-204ENSMUST00000224838 714 ntBASIC5.47□□□□□ -1.53
Cxcl12P40224 AC131033.2-201ENSMUST00000228138 1011 ntBASIC5.47□□□□□ -1.53
Cxcl12P40224 Defb35-201ENSMUST00000076786 267 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
Cxcl12P40224 Gm44901-201ENSMUST00000208157 3977 ntBASIC5.47□□□□□ -1.53
Cxcl12P40224 Gm37913-201ENSMUST00000192925 2544 ntBASIC5.47□□□□□ -1.53
Cxcl12P40224 Vps13c-201ENSMUST00000077879 11527 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
Cxcl12P40224 Zmynd11-201ENSMUST00000062658 3796 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
Cxcl12P40224 Gm43360-201ENSMUST00000197656 2887 ntBASIC5.47□□□□□ -1.53
Cxcl12P40224 Olfr1239-203ENSMUST00000217181 1516 ntAPPRIS P1 TSL 5 BASIC5.47□□□□□ -1.53
Cxcl12P40224 Gm28183-201ENSMUST00000191321 1406 ntTSL 5 BASIC5.47□□□□□ -1.53
Cxcl12P40224 Gm36099-201ENSMUST00000221946 1798 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
Cxcl12P40224 Arhgap12-202ENSMUST00000077128 4431 ntAPPRIS ALT2 TSL 1 (best) BASIC5.47□□□□□ -1.53
Cxcl12P40224 2700099C18Rik-204ENSMUST00000183133 1333 ntBASIC5.47□□□□□ -1.53
Cxcl12P40224 Zfp2-202ENSMUST00000109129 2803 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
Cxcl12P40224 Gm46199-201ENSMUST00000220373 1693 ntBASIC5.47□□□□□ -1.53
Cxcl12P40224 Mmp1a-201ENSMUST00000034492 2022 ntAPPRIS P1 TSL 5 BASIC5.47□□□□□ -1.53
Cxcl12P40224 C1d-201ENSMUST00000000594 2981 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.53
Cxcl12P40224 Adam4-201ENSMUST00000085319 2504 ntAPPRIS P1 BASIC5.46□□□□□ -1.53
Cxcl12P40224 Gm39321-201ENSMUST00000216597 2075 ntTSL 1 (best) BASIC5.46□□□□□ -1.53
Cxcl12P40224 AW551984-202ENSMUST00000119722 4224 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.54
Cxcl12P40224 Tbc1d32-201ENSMUST00000099739 7240 ntAPPRIS P1 TSL 5 BASIC5.46□□□□□ -1.54
Cxcl12P40224 Gm14606-201ENSMUST00000117078 1155 ntBASIC5.46□□□□□ -1.54
Cxcl12P40224 Gm16007-201ENSMUST00000117837 286 ntBASIC5.46□□□□□ -1.54
Cxcl12P40224 Gm15772-201ENSMUST00000118533 438 ntBASIC5.46□□□□□ -1.54
Cxcl12P40224 Gm12281-201ENSMUST00000119536 298 ntBASIC5.46□□□□□ -1.54
Cxcl12P40224 Gm14998-201ENSMUST00000120502 495 ntBASIC5.46□□□□□ -1.54
Cxcl12P40224 Gm15168-201ENSMUST00000121057 316 ntBASIC5.46□□□□□ -1.54
Cxcl12P40224 Gm22311-201ENSMUST00000158006 110 ntBASIC5.46□□□□□ -1.54
Cxcl12P40224 Vmn1r101-201ENSMUST00000164245 924 ntAPPRIS P1 BASIC5.46□□□□□ -1.54
Cxcl12P40224 Vmn1r119-201ENSMUST00000164683 924 ntAPPRIS P1 BASIC5.46□□□□□ -1.54
Cxcl12P40224 Vmn1r149-201ENSMUST00000165916 924 ntAPPRIS P1 BASIC5.46□□□□□ -1.54
Cxcl12P40224 Gm4187-201ENSMUST00000172551 924 ntAPPRIS P1 BASIC5.46□□□□□ -1.54
Cxcl12P40224 Gm4133-201ENSMUST00000172989 924 ntAPPRIS P1 BASIC5.46□□□□□ -1.54
Cxcl12P40224 Malat1-202ENSMUST00000173314 556 ntTSL 3 BASIC5.46□□□□□ -1.54
Cxcl12P40224 Rpl9-ps5-201ENSMUST00000174221 571 ntBASIC5.46□□□□□ -1.54
Cxcl12P40224 Obox4-ps26-201ENSMUST00000176368 724 ntBASIC5.46□□□□□ -1.54
Cxcl12P40224 Gm20711-201ENSMUST00000177351 714 ntTSL 3 BASIC5.46□□□□□ -1.54
Retrieved 100 of 76,532 protein–RNA pairs in 88.6 ms