Protein–RNA interactions for Protein: P39428

Traf1, TNF receptor-associated factor 1, mousemouse

Predictions only

Length 409 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Traf1P39428 Gm21915-201ENSMUST00000177787 402 ntAPPRIS P1 BASIC6.35□□□□□ -1.39
Traf1P39428 Gm22420-201ENSMUST00000178795 126 ntBASIC6.35□□□□□ -1.39
Traf1P39428 Gm28017-201ENSMUST00000183434 126 ntBASIC6.35□□□□□ -1.39
Traf1P39428 Gm27201-201ENSMUST00000183818 416 ntTSL 3 BASIC6.35□□□□□ -1.39
Traf1P39428 Mir7087-201ENSMUST00000184840 70 ntBASIC6.35□□□□□ -1.39
Traf1P39428 Gm29570-201ENSMUST00000185813 681 ntTSL 3 BASIC6.35□□□□□ -1.39
Traf1P39428 Gm28871-201ENSMUST00000186191 687 ntBASIC6.35□□□□□ -1.39
Traf1P39428 2010005H15Rik-202ENSMUST00000187183 639 ntAPPRIS P1 TSL 1 (best) BASIC6.35□□□□□ -1.39
Traf1P39428 Gm29755-201ENSMUST00000196976 948 ntBASIC6.35□□□□□ -1.39
Traf1P39428 Gm33952-201ENSMUST00000197795 408 ntBASIC6.35□□□□□ -1.39
Traf1P39428 Gm43974-201ENSMUST00000205080 684 ntBASIC6.35□□□□□ -1.39
Traf1P39428 Gm44559-201ENSMUST00000207177 1012 ntBASIC6.35□□□□□ -1.39
Traf1P39428 Gm45272-202ENSMUST00000209875 502 ntTSL 3 BASIC6.35□□□□□ -1.39
Traf1P39428 Gm45870-201ENSMUST00000211269 601 ntBASIC6.35□□□□□ -1.39
Traf1P39428 Gm18541-201ENSMUST00000215935 538 ntBASIC6.35□□□□□ -1.39
Traf1P39428 AC127337.1-201ENSMUST00000220423 625 ntTSL 2 BASIC6.35□□□□□ -1.39
Traf1P39428 AC238676.3-201ENSMUST00000223042 154 ntBASIC6.35□□□□□ -1.39
Traf1P39428 A930023M06Rik-201ENSMUST00000223270 1093 ntTSL 1 (best) BASIC6.35□□□□□ -1.39
Traf1P39428 AC154838.2-201ENSMUST00000226602 747 ntBASIC6.35□□□□□ -1.39
Traf1P39428 CT030238.4-203ENSMUST00000227343 836 ntBASIC6.35□□□□□ -1.39
Traf1P39428 Orm3-201ENSMUST00000006687 773 ntAPPRIS P1 TSL 5 BASIC6.35□□□□□ -1.39
Traf1P39428 Gm22456-201ENSMUST00000082578 125 ntBASIC6.35□□□□□ -1.39
Traf1P39428 Gm11808-201ENSMUST00000089430 504 ntAPPRIS P1 BASIC6.35□□□□□ -1.39
Traf1P39428 Gm5941-201ENSMUST00000096371 560 ntAPPRIS P1 TSL 1 (best) BASIC6.35□□□□□ -1.39
Traf1P39428 Gm37781-201ENSMUST00000194773 3218 ntBASIC6.35□□□□□ -1.39
Traf1P39428 Pls3-202ENSMUST00000114057 3160 ntAPPRIS P1 TSL 1 (best) BASIC6.35□□□□□ -1.39
Traf1P39428 Slc22a27-201ENSMUST00000075619 2152 ntAPPRIS P1 TSL 1 (best) BASIC6.35□□□□□ -1.39
Traf1P39428 Zfp317-202ENSMUST00000208694 3988 ntAPPRIS P1 TSL 1 (best) BASIC6.35□□□□□ -1.39
Traf1P39428 Cdk14-201ENSMUST00000030763 4851 ntAPPRIS P3 TSL 1 (best) BASIC6.35□□□□□ -1.39
Traf1P39428 Agbl2-204ENSMUST00000111481 3448 ntAPPRIS P2 TSL 5 BASIC6.35□□□□□ -1.39
Traf1P39428 Kynu-203ENSMUST00000112826 1587 ntTSL 1 (best) BASIC6.35□□□□□ -1.39
Traf1P39428 Olfr552-202ENSMUST00000215712 4206 ntAPPRIS P1 TSL 5 BASIC6.35□□□□□ -1.39
Traf1P39428 Olfr635-202ENSMUST00000209473 8565 ntAPPRIS ALT2 TSL 5 BASIC6.35□□□□□ -1.39
Traf1P39428 Anapc10-201ENSMUST00000048147 2801 ntAPPRIS P1 TSL 1 (best) BASIC6.35□□□□□ -1.39
Traf1P39428 Vmn1r61-201ENSMUST00000164880 1818 ntAPPRIS P1 BASIC6.34□□□□□ -1.39
Traf1P39428 Gm7919-201ENSMUST00000202043 1389 ntBASIC6.34□□□□□ -1.39
Traf1P39428 Gm45172-201ENSMUST00000206054 1301 ntBASIC6.34□□□□□ -1.39
Traf1P39428 Igkv10-96-201ENSMUST00000103328 359 ntAPPRIS P1 BASIC6.34□□□□□ -1.39
Traf1P39428 Zfp965-202ENSMUST00000109042 1271 ntTSL 1 (best) BASIC6.34□□□□□ -1.39
Traf1P39428 Olfr1146-ps1-201ENSMUST00000117180 943 ntBASIC6.34□□□□□ -1.39
Traf1P39428 Gm11825-201ENSMUST00000120710 736 ntBASIC6.34□□□□□ -1.39
Traf1P39428 Gm11894-201ENSMUST00000121579 328 ntBASIC6.34□□□□□ -1.39
Traf1P39428 Zfp973-202ENSMUST00000121956 1271 ntTSL 1 (best) BASIC6.34□□□□□ -1.39
Traf1P39428 G630016G05Rik-201ENSMUST00000152412 796 ntTSL 1 (best) BASIC6.34□□□□□ -1.39
Traf1P39428 Gm25824-201ENSMUST00000157092 121 ntBASIC6.34□□□□□ -1.39
Traf1P39428 Mir1963-201ENSMUST00000158594 59 ntBASIC6.34□□□□□ -1.39
Traf1P39428 Gm15812-201ENSMUST00000162331 748 ntBASIC6.34□□□□□ -1.39
Traf1P39428 Gm20545-201ENSMUST00000174739 210 ntBASIC6.34□□□□□ -1.39
Traf1P39428 Rps19-ps12-201ENSMUST00000181937 430 ntBASIC6.34□□□□□ -1.39
Traf1P39428 Gm28750-201ENSMUST00000186327 658 ntTSL 5 BASIC6.34□□□□□ -1.39
Traf1P39428 Igkv15-101-201ENSMUST00000195917 299 ntBASIC6.34□□□□□ -1.39
Traf1P39428 Gm19708-201ENSMUST00000199386 543 ntTSL 2 BASIC6.34□□□□□ -1.39
Traf1P39428 1810017P11Rik-201ENSMUST00000202592 558 ntBASIC6.34□□□□□ -1.39
Traf1P39428 Gm45700-201ENSMUST00000205866 347 ntBASIC6.34□□□□□ -1.39
Traf1P39428 Gm33601-201ENSMUST00000210001 961 ntBASIC6.34□□□□□ -1.39
Traf1P39428 4933411E02Rik-201ENSMUST00000216779 1030 ntTSL 1 (best) BASIC6.34□□□□□ -1.39
Traf1P39428 AC154846.2-201ENSMUST00000228805 424 ntBASIC6.34□□□□□ -1.39
Traf1P39428 Anapc13-201ENSMUST00000038673 411 ntAPPRIS P1 TSL 5 BASIC6.34□□□□□ -1.39
Traf1P39428 Gm20449-201ENSMUST00000094532 3847 ntAPPRIS P1 TSL 2 BASIC6.34□□□□□ -1.39
Traf1P39428 Olfr704-202ENSMUST00000098141 948 ntAPPRIS P1 BASIC6.34□□□□□ -1.39
Traf1P39428 Serpinb9f-201ENSMUST00000075515 1912 ntAPPRIS P1 TSL 1 (best) BASIC6.34□□□□□ -1.39
Traf1P39428 AC112972.2-201ENSMUST00000228702 2210 ntBASIC6.34□□□□□ -1.39
Traf1P39428 9230109A22Rik-202ENSMUST00000228644 1853 ntBASIC6.34□□□□□ -1.39
Traf1P39428 Amd1-201ENSMUST00000099945 3204 ntAPPRIS P1 TSL 1 (best) BASIC6.34□□□□□ -1.39
Traf1P39428 Gm44829-201ENSMUST00000208008 3193 ntBASIC6.34□□□□□ -1.4
Traf1P39428 Zfp113-201ENSMUST00000049393 6470 ntAPPRIS P1 TSL 1 (best) BASIC6.34□□□□□ -1.4
Traf1P39428 Vmn1r9-202ENSMUST00000227399 6778 ntAPPRIS P1 BASIC6.34□□□□□ -1.4
Traf1P39428 Clca4c-ps-202ENSMUST00000200595 2779 ntBASIC6.34□□□□□ -1.4
Traf1P39428 Dcn-201ENSMUST00000105287 1758 ntAPPRIS P1 TSL 1 (best) BASIC6.34□□□□□ -1.4
Traf1P39428 Olfr1131-202ENSMUST00000213302 1779 ntAPPRIS P1 TSL 5 BASIC6.34□□□□□ -1.4
Traf1P39428 9430037G07Rik-201ENSMUST00000180723 3177 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
Traf1P39428 9230019H11Rik-201ENSMUST00000095874 2801 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
Traf1P39428 Gm37101-201ENSMUST00000191656 3660 ntBASIC6.33□□□□□ -1.4
Traf1P39428 Zfp148-ps1-201ENSMUST00000211201 2453 ntBASIC6.33□□□□□ -1.4
Traf1P39428 Gm45149-201ENSMUST00000206459 2172 ntBASIC6.33□□□□□ -1.4
Traf1P39428 Gm13103-202ENSMUST00000105768 994 ntAPPRIS ALT2 TSL 2 BASIC6.33□□□□□ -1.4
Traf1P39428 Gm16205-201ENSMUST00000117720 1027 ntBASIC6.33□□□□□ -1.4
Traf1P39428 Gm11447-201ENSMUST00000118983 858 ntBASIC6.33□□□□□ -1.4
Traf1P39428 Gm3931-201ENSMUST00000119038 455 ntBASIC6.33□□□□□ -1.4
Traf1P39428 Olfr397-201ENSMUST00000121280 1091 ntAPPRIS P1 BASIC6.33□□□□□ -1.4
Traf1P39428 Gm7879-201ENSMUST00000122204 774 ntAPPRIS P1 BASIC6.33□□□□□ -1.4
Traf1P39428 Gm11197-201ENSMUST00000145158 839 ntBASIC6.33□□□□□ -1.4
Traf1P39428 Gm17907-201ENSMUST00000173150 710 ntBASIC6.33□□□□□ -1.4
Traf1P39428 5730522E02Rik-208ENSMUST00000179180 450 ntAPPRIS ALT2 TSL 5 BASIC6.33□□□□□ -1.4
Traf1P39428 Gm26970-201ENSMUST00000182990 964 ntBASIC6.33□□□□□ -1.4
Traf1P39428 Gm37676-201ENSMUST00000195496 507 ntBASIC6.33□□□□□ -1.4
Traf1P39428 4933438B17Rik-202ENSMUST00000196374 576 ntTSL 3 BASIC6.33□□□□□ -1.4
Traf1P39428 Gm42437-201ENSMUST00000197263 923 ntBASIC6.33□□□□□ -1.4
Traf1P39428 Gm44673-201ENSMUST00000205692 996 ntBASIC6.33□□□□□ -1.4
Traf1P39428 Gm45845-201ENSMUST00000207326 582 ntBASIC6.33□□□□□ -1.4
Traf1P39428 Gm18205-201ENSMUST00000209215 841 ntBASIC6.33□□□□□ -1.4
Traf1P39428 Gm15839-202ENSMUST00000211219 664 ntTSL 3 BASIC6.33□□□□□ -1.4
Traf1P39428 AC156572.1-201ENSMUST00000221040 1161 ntTSL 5 BASIC6.33□□□□□ -1.4
Traf1P39428 AC165347.1-201ENSMUST00000224089 1025 ntBASIC6.33□□□□□ -1.4
Traf1P39428 AC133203.2-201ENSMUST00000226709 464 ntBASIC6.33□□□□□ -1.4
Traf1P39428 Olfr1444-201ENSMUST00000059675 1129 ntAPPRIS P1 BASIC6.33□□□□□ -1.4
Traf1P39428 Nusap1-202ENSMUST00000068225 2960 ntAPPRIS P3 TSL 1 (best) BASIC6.33□□□□□ -1.4
Traf1P39428 Olfr231-202ENSMUST00000214446 5204 ntAPPRIS P1 TSL 5 BASIC6.33□□□□□ -1.4
Traf1P39428 Gm4011-201ENSMUST00000174657 2555 ntBASIC6.33□□□□□ -1.4
Traf1P39428 Iqca-207ENSMUST00000212394 2574 ntAPPRIS ALT2 TSL 5 BASIC6.33□□□□□ -1.4
Retrieved 100 of 76,532 protein–RNA pairs in 73.5 ms