Protein–RNA interactions for Protein: P31313

Hoxc11, Homeobox protein Hox-C11, mousemouse

Predictions only

Length 304 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxc11P31313 Bcl2l15-201ENSMUST00000062945 833 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
Hoxc11P31313 Rybp-ps-201ENSMUST00000069489 681 ntBASIC5.58□□□□□ -1.52
Hoxc11P31313 mt-Nd2-201ENSMUST00000082396 1038 ntAPPRIS P1 BASIC5.58□□□□□ -1.52
Hoxc11P31313 Mup3-201ENSMUST00000084531 938 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
Hoxc11P31313 Ctla4-202ENSMUST00000097720 614 ntAPPRIS ALT2 TSL 5 BASIC5.58□□□□□ -1.52
Hoxc11P31313 Olfr592-201ENSMUST00000098207 939 ntAPPRIS P1 BASIC5.58□□□□□ -1.52
Hoxc11P31313 Olfr1181-201ENSMUST00000099823 936 ntAPPRIS P1 BASIC5.58□□□□□ -1.52
Hoxc11P31313 Hsf3-204ENSMUST00000164693 2076 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
Hoxc11P31313 Vmn1r189-202ENSMUST00000227357 3245 ntAPPRIS P1 BASIC5.58□□□□□ -1.52
Hoxc11P31313 Fam107b-209ENSMUST00000226435 3602 ntBASIC5.58□□□□□ -1.52
Hoxc11P31313 Ccr9-203ENSMUST00000166236 5197 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
Hoxc11P31313 Clca4c-ps-202ENSMUST00000200595 2779 ntBASIC5.58□□□□□ -1.52
Hoxc11P31313 Acsl4-204ENSMUST00000112907 5137 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
Hoxc11P31313 Olfr1080-201ENSMUST00000213185 1582 ntAPPRIS P1 TSL 2 BASIC5.58□□□□□ -1.52
Hoxc11P31313 Evi2-202ENSMUST00000170422 3944 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
Hoxc11P31313 Gm15713-201ENSMUST00000155900 1546 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
Hoxc11P31313 Gm6300-201ENSMUST00000192393 1498 ntBASIC5.58□□□□□ -1.52
Hoxc11P31313 Tbc1d23-201ENSMUST00000023431 3690 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
Hoxc11P31313 Piga-201ENSMUST00000033754 3594 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
Hoxc11P31313 Tgif1-210ENSMUST00000172229 1446 ntAPPRIS ALT1 TSL 3 BASIC5.57□□□□□ -1.52
Hoxc11P31313 Gm42397-205ENSMUST00000208692 1449 ntTSL 5 BASIC5.57□□□□□ -1.52
Hoxc11P31313 Gm37482-201ENSMUST00000194899 2791 ntBASIC5.57□□□□□ -1.52
Hoxc11P31313 Olfr441-202ENSMUST00000213649 2402 ntAPPRIS P1 TSL 3 BASIC5.57□□□□□ -1.52
Hoxc11P31313 Olfr916-202ENSMUST00000213714 1380 ntAPPRIS P1 TSL 5 BASIC5.57□□□□□ -1.52
Hoxc11P31313 Scp2-ps2-203ENSMUST00000216438 1370 ntBASIC5.57□□□□□ -1.52
Hoxc11P31313 Olfr453-202ENSMUST00000213997 3082 ntAPPRIS P1 TSL 5 BASIC5.57□□□□□ -1.52
Hoxc11P31313 Zfp287-206ENSMUST00000185656 3370 ntAPPRIS P2 TSL 1 (best) BASIC5.57□□□□□ -1.52
Hoxc11P31313 Nlgn1-201ENSMUST00000075054 4359 ntAPPRIS P3 TSL 5 BASIC5.57□□□□□ -1.52
Hoxc11P31313 AL670757.1-201ENSMUST00000223668 1959 ntBASIC5.57□□□□□ -1.52
Hoxc11P31313 Glcci1-206ENSMUST00000162567 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC5.57□□□□□ -1.52
Hoxc11P31313 Gm26078-201ENSMUST00000104067 128 ntBASIC5.57□□□□□ -1.52
Hoxc11P31313 Gm11032-201ENSMUST00000109941 102 ntAPPRIS P1 TSL 5 BASIC5.57□□□□□ -1.52
Hoxc11P31313 Gm15933-201ENSMUST00000117215 616 ntBASIC5.57□□□□□ -1.52
Hoxc11P31313 Gm22959-201ENSMUST00000122514 303 ntBASIC5.57□□□□□ -1.52
Hoxc11P31313 Gm11844-201ENSMUST00000129207 459 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
Hoxc11P31313 Gm14808-201ENSMUST00000129259 361 ntTSL 3 BASIC5.57□□□□□ -1.52
Hoxc11P31313 Smyd1-204ENSMUST00000129630 376 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
Hoxc11P31313 4933401B06Rik-201ENSMUST00000139758 1155 ntBASIC5.57□□□□□ -1.52
Hoxc11P31313 Gm23587-201ENSMUST00000157658 84 ntBASIC5.57□□□□□ -1.52
Hoxc11P31313 Gm15995-201ENSMUST00000159897 574 ntTSL 5 BASIC5.57□□□□□ -1.52
Hoxc11P31313 Gm9006-201ENSMUST00000165520 841 ntBASIC5.57□□□□□ -1.52
Hoxc11P31313 Scgb1b34-ps-201ENSMUST00000187959 331 ntBASIC5.57□□□□□ -1.52
Hoxc11P31313 Gm37708-201ENSMUST00000192337 895 ntBASIC5.57□□□□□ -1.52
Hoxc11P31313 Gm37004-201ENSMUST00000193021 683 ntTSL 5 BASIC5.57□□□□□ -1.52
Hoxc11P31313 Gm44997-202ENSMUST00000205970 425 ntTSL 3 BASIC5.57□□□□□ -1.52
Hoxc11P31313 Gm6009-201ENSMUST00000210848 280 ntBASIC5.57□□□□□ -1.52
Hoxc11P31313 AC102287.1-201ENSMUST00000211412 454 ntBASIC5.57□□□□□ -1.52
Hoxc11P31313 AC165164.1-202ENSMUST00000219324 649 ntTSL 3 BASIC5.57□□□□□ -1.52
Hoxc11P31313 Gm31063-201ENSMUST00000222636 580 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
Hoxc11P31313 AC130547.1-201ENSMUST00000228079 1047 ntBASIC5.57□□□□□ -1.52
Hoxc11P31313 AC166369.2-201ENSMUST00000228403 308 ntBASIC5.57□□□□□ -1.52
Hoxc11P31313 4931400O07Rik-201ENSMUST00000033537 647 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
Hoxc11P31313 Olfr352-201ENSMUST00000065416 948 ntAPPRIS P1 BASIC5.57□□□□□ -1.52
Hoxc11P31313 Olfr1469-201ENSMUST00000077538 930 ntAPPRIS P1 BASIC5.57□□□□□ -1.52
Hoxc11P31313 Olfr1145-201ENSMUST00000079711 945 ntAPPRIS ALT2 BASIC5.57□□□□□ -1.52
Hoxc11P31313 n-R5s204-201ENSMUST00000082972 119 ntBASIC5.57□□□□□ -1.52
Hoxc11P31313 n-R5s161-201ENSMUST00000083728 114 ntBASIC5.57□□□□□ -1.52
Hoxc11P31313 Olfr1145-202ENSMUST00000090707 978 ntAPPRIS P2 BASIC5.57□□□□□ -1.52
Hoxc11P31313 Olfr1110-201ENSMUST00000099861 939 ntAPPRIS P1 BASIC5.57□□□□□ -1.52
Hoxc11P31313 Olfr1105-201ENSMUST00000099868 939 ntAPPRIS P1 BASIC5.57□□□□□ -1.52
Hoxc11P31313 Ints12-201ENSMUST00000029650 3101 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
Hoxc11P31313 Cep192-201ENSMUST00000025425 8093 ntAPPRIS P1 TSL 5 BASIC5.57□□□□□ -1.52
Hoxc11P31313 Tom1l1-204ENSMUST00000107869 1826 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
Hoxc11P31313 Slc22a27-202ENSMUST00000182102 1801 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
Hoxc11P31313 Fcrl5-205ENSMUST00000194102 2449 ntAPPRIS P4 TSL 1 (best) BASIC5.57□□□□□ -1.52
Hoxc11P31313 Gm38362-201ENSMUST00000192999 2064 ntBASIC5.57□□□□□ -1.52
Hoxc11P31313 Mctp1-205ENSMUST00000126960 1780 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
Hoxc11P31313 Sgip1-205ENSMUST00000106882 6061 ntAPPRIS ALT2 TSL 5 BASIC5.57□□□□□ -1.52
Hoxc11P31313 Zfp62-202ENSMUST00000109197 4029 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
Hoxc11P31313 Gabrg2-203ENSMUST00000109290 2868 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
Hoxc11P31313 1700129L04Rik-202ENSMUST00000189291 1401 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
Hoxc11P31313 Rsrc2-219ENSMUST00000182955 1685 ntTSL 5 BASIC5.56□□□□□ -1.52
Hoxc11P31313 Gm18852-201ENSMUST00000184149 3593 ntBASIC5.56□□□□□ -1.52
Hoxc11P31313 Gm42535-201ENSMUST00000197312 1399 ntBASIC5.56□□□□□ -1.52
Hoxc11P31313 AC124569.3-201ENSMUST00000224860 1621 ntBASIC5.56□□□□□ -1.52
Hoxc11P31313 Vmn1r27-202ENSMUST00000226666 2969 ntAPPRIS ALT2 BASIC5.56□□□□□ -1.52
Hoxc11P31313 Gm7680-201ENSMUST00000216198 1348 ntBASIC5.56□□□□□ -1.52
Hoxc11P31313 Gm43771-201ENSMUST00000202931 1578 ntBASIC5.56□□□□□ -1.52
Hoxc11P31313 Slc38a4-201ENSMUST00000023101 3932 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
Hoxc11P31313 Hyal5-201ENSMUST00000031689 1838 ntAPPRIS P1 TSL 5 BASIC5.56□□□□□ -1.52
Hoxc11P31313 Vmn1r-ps94-201ENSMUST00000122016 458 ntBASIC5.56□□□□□ -1.52
Hoxc11P31313 Crem-222ENSMUST00000144496 978 ntTSL 5 BASIC5.56□□□□□ -1.52
Hoxc11P31313 Ptges3-ps-201ENSMUST00000160012 480 ntBASIC5.56□□□□□ -1.52
Hoxc11P31313 Calml4-202ENSMUST00000163820 699 ntTSL 2 BASIC5.56□□□□□ -1.52
Hoxc11P31313 Gm22111-201ENSMUST00000178010 79 ntBASIC5.56□□□□□ -1.52
Hoxc11P31313 Gm23687-201ENSMUST00000178664 79 ntBASIC5.56□□□□□ -1.52
Hoxc11P31313 Gm24566-201ENSMUST00000179286 79 ntBASIC5.56□□□□□ -1.52
Hoxc11P31313 Gm23305-201ENSMUST00000179342 79 ntBASIC5.56□□□□□ -1.52
Hoxc11P31313 Gm26389-201ENSMUST00000179819 79 ntBASIC5.56□□□□□ -1.52
Hoxc11P31313 Gm22130-201ENSMUST00000179979 79 ntBASIC5.56□□□□□ -1.52
Hoxc11P31313 Il18-202ENSMUST00000180021 702 ntAPPRIS P2 TSL 1 (best) BASIC5.56□□□□□ -1.52
Hoxc11P31313 Gm22393-201ENSMUST00000180153 79 ntBASIC5.56□□□□□ -1.52
Hoxc11P31313 Gm25085-201ENSMUST00000180298 79 ntBASIC5.56□□□□□ -1.52
Hoxc11P31313 Gm4258-201ENSMUST00000182127 506 ntTSL 2 BASIC5.56□□□□□ -1.52
Hoxc11P31313 Gm27976-201ENSMUST00000183635 162 ntBASIC5.56□□□□□ -1.52
Hoxc11P31313 Gm18728-201ENSMUST00000186155 753 ntBASIC5.56□□□□□ -1.52
Hoxc11P31313 Gm28943-201ENSMUST00000186187 615 ntBASIC5.56□□□□□ -1.52
Hoxc11P31313 Gm28736-201ENSMUST00000186257 615 ntBASIC5.56□□□□□ -1.52
Hoxc11P31313 Gm29401-201ENSMUST00000186690 615 ntBASIC5.56□□□□□ -1.52
Hoxc11P31313 Gm29178-204ENSMUST00000186784 615 ntBASIC5.56□□□□□ -1.52
Retrieved 100 of 76,532 protein–RNA pairs in 96 ms