Protein–RNA interactions for Protein: P11260

Lire1, LINE-1 retrotransposable element ORF1 protein, mousemouse

Predictions only

Length 357 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lire1P11260 Gm19176-201ENSMUST00000222149 1831 ntBASIC5.48□□□□□ -1.53
Lire1P11260 Gm42540-201ENSMUST00000200319 2008 ntBASIC5.48□□□□□ -1.53
Lire1P11260 Ttn-202ENSMUST00000099980 16891 ntTSL 5 BASIC5.48□□□□□ -1.53
Lire1P11260 3110043O21Rik-202ENSMUST00000108126 2644 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
Lire1P11260 Pnpla8-202ENSMUST00000122902 2728 ntAPPRIS ALT2 TSL 1 (best) BASIC5.48□□□□□ -1.53
Lire1P11260 Olfr720-203ENSMUST00000216079 4692 ntAPPRIS P1 TSL 5 BASIC5.48□□□□□ -1.53
Lire1P11260 Ptprd-201ENSMUST00000050757 4698 ntTSL 5 BASIC5.48□□□□□ -1.53
Lire1P11260 Gm44043-201ENSMUST00000203426 3253 ntBASIC5.48□□□□□ -1.53
Lire1P11260 Gm42507-201ENSMUST00000201187 2555 ntBASIC5.48□□□□□ -1.53
Lire1P11260 Ifi202b-201ENSMUST00000000266 1697 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
Lire1P11260 Neto2-203ENSMUST00000209479 4936 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
Lire1P11260 AY358078-201ENSMUST00000053821 1461 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
Lire1P11260 Emcn-201ENSMUST00000119475 1357 ntAPPRIS P3 TSL 1 (best) BASIC5.48□□□□□ -1.53
Lire1P11260 Igkv6-23-201ENSMUST00000103386 369 ntAPPRIS P1 BASIC5.48□□□□□ -1.53
Lire1P11260 Gm13090-201ENSMUST00000105667 746 ntAPPRIS P1 TSL 3 BASIC5.48□□□□□ -1.53
Lire1P11260 Gm16463-201ENSMUST00000120527 721 ntBASIC5.48□□□□□ -1.53
Lire1P11260 2610024D14Rik-201ENSMUST00000121233 294 ntBASIC5.48□□□□□ -1.53
Lire1P11260 Gm13508-201ENSMUST00000121639 775 ntBASIC5.48□□□□□ -1.53
Lire1P11260 Gm15237-201ENSMUST00000122104 469 ntBASIC5.48□□□□□ -1.53
Lire1P11260 Gm22514-201ENSMUST00000122547 308 ntBASIC5.48□□□□□ -1.53
Lire1P11260 Gm22599-201ENSMUST00000157597 132 ntBASIC5.48□□□□□ -1.53
Lire1P11260 Gm24664-201ENSMUST00000158939 100 ntBASIC5.48□□□□□ -1.53
Lire1P11260 Gm16161-201ENSMUST00000162239 290 ntTSL 2 BASIC5.48□□□□□ -1.53
Lire1P11260 Sptssb-202ENSMUST00000171529 772 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
Lire1P11260 Gm26969-201ENSMUST00000183203 648 ntTSL 3 BASIC5.48□□□□□ -1.53
Lire1P11260 Gm27240-201ENSMUST00000183616 677 ntTSL 3 BASIC5.48□□□□□ -1.53
Lire1P11260 Igkv19-93-201ENSMUST00000183936 344 ntAPPRIS ALT2 BASIC5.48□□□□□ -1.53
Lire1P11260 Mir6952-201ENSMUST00000185092 61 ntBASIC5.48□□□□□ -1.53
Lire1P11260 Gm37700-201ENSMUST00000192617 965 ntBASIC5.48□□□□□ -1.53
Lire1P11260 Gm19002-201ENSMUST00000192649 1012 ntBASIC5.48□□□□□ -1.53
Lire1P11260 D3Ertd751e-212ENSMUST00000194346 744 ntAPPRIS P3 TSL 1 (best) BASIC5.48□□□□□ -1.53
Lire1P11260 Gm42707-201ENSMUST00000196620 322 ntTSL 5 BASIC5.48□□□□□ -1.53
Lire1P11260 Traj59-202ENSMUST00000197589 62 ntAPPRIS P1 BASIC5.48□□□□□ -1.53
Lire1P11260 Gm44108-201ENSMUST00000203525 422 ntBASIC5.48□□□□□ -1.53
Lire1P11260 Gm44649-201ENSMUST00000205608 364 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
Lire1P11260 Gm45473-201ENSMUST00000211452 616 ntBASIC5.48□□□□□ -1.53
Lire1P11260 Gm8137-201ENSMUST00000218997 463 ntBASIC5.48□□□□□ -1.53
Lire1P11260 Gm9088-201ENSMUST00000220237 508 ntBASIC5.48□□□□□ -1.53
Lire1P11260 Gm18592-201ENSMUST00000221529 276 ntBASIC5.48□□□□□ -1.53
Lire1P11260 AC159622.2-201ENSMUST00000221592 983 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
Lire1P11260 AC091783.2-201ENSMUST00000224626 740 ntBASIC5.48□□□□□ -1.53
Lire1P11260 AC151907.1-201ENSMUST00000228812 412 ntBASIC5.48□□□□□ -1.53
Lire1P11260 Klrc3-201ENSMUST00000071149 715 ntAPPRIS P2 TSL 1 (best) BASIC5.48□□□□□ -1.53
Lire1P11260 Mir194-1-201ENSMUST00000083647 67 ntBASIC5.48□□□□□ -1.53
Lire1P11260 Gm25005-201ENSMUST00000083812 156 ntBASIC5.48□□□□□ -1.53
Lire1P11260 Vmn1r4-201ENSMUST00000096612 1034 ntAPPRIS P1 BASIC5.48□□□□□ -1.53
Lire1P11260 Stx17-202ENSMUST00000107720 5770 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
Lire1P11260 Zc2hc1a-201ENSMUST00000051064 3292 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
Lire1P11260 Vmn1r6-207ENSMUST00000228285 7950 ntAPPRIS P2 BASIC5.48□□□□□ -1.53
Lire1P11260 Olfr360-202ENSMUST00000216706 1816 ntAPPRIS P1 TSL 5 BASIC5.48□□□□□ -1.53
Lire1P11260 Vmn1r90-202ENSMUST00000226264 7796 ntAPPRIS P2 BASIC5.48□□□□□ -1.53
Lire1P11260 Gm19035-201ENSMUST00000193299 1742 ntBASIC5.48□□□□□ -1.53
Lire1P11260 AC162908.1-201ENSMUST00000219164 4563 ntBASIC5.48□□□□□ -1.53
Lire1P11260 Abcc9-203ENSMUST00000100827 7306 ntAPPRIS ALT2 TSL 1 (best) BASIC5.48□□□□□ -1.53
Lire1P11260 Cdh7-203ENSMUST00000129923 1409 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
Lire1P11260 Cd200r3-206ENSMUST00000114622 1339 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
Lire1P11260 Gm42860-201ENSMUST00000196492 3991 ntBASIC5.48□□□□□ -1.53
Lire1P11260 Obox7-201ENSMUST00000069740 1306 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
Lire1P11260 Olfr821-202ENSMUST00000205181 1993 ntAPPRIS P1 TSL 2 BASIC5.47□□□□□ -1.53
Lire1P11260 Olfr1020-202ENSMUST00000215347 2640 ntAPPRIS P1 TSL 3 BASIC5.47□□□□□ -1.53
Lire1P11260 Serpinb7-201ENSMUST00000086690 1887 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
Lire1P11260 Gm34069-201ENSMUST00000214060 2441 ntTSL 5 BASIC5.47□□□□□ -1.53
Lire1P11260 AC139218.1-201ENSMUST00000228215 4287 ntBASIC5.47□□□□□ -1.53
Lire1P11260 Olfr129-202ENSMUST00000216476 5275 ntAPPRIS P1 TSL 3 BASIC5.47□□□□□ -1.53
Lire1P11260 Olfr2-206ENSMUST00000216375 5828 ntAPPRIS P1 TSL 3 BASIC5.47□□□□□ -1.53
Lire1P11260 Vmn1r167-202ENSMUST00000227713 2677 ntAPPRIS P1 BASIC5.47□□□□□ -1.53
Lire1P11260 1700080O16Rik-201ENSMUST00000033449 1454 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
Lire1P11260 Olfr1195-202ENSMUST00000213545 2585 ntAPPRIS P1 TSL 5 BASIC5.47□□□□□ -1.53
Lire1P11260 Kcnma1-204ENSMUST00000112423 3664 ntTSL 5 BASIC5.47□□□□□ -1.53
Lire1P11260 Nlrp1b-203ENSMUST00000108515 4131 ntAPPRIS ALT2 TSL 1 (best) BASIC5.47□□□□□ -1.53
Lire1P11260 Olfr701-203ENSMUST00000217739 4100 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
Lire1P11260 Phf11c-201ENSMUST00000166912 3459 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
Lire1P11260 Gm13321-201ENSMUST00000117101 400 ntBASIC5.47□□□□□ -1.53
Lire1P11260 Gm14173-201ENSMUST00000117690 278 ntBASIC5.47□□□□□ -1.53
Lire1P11260 Gm12768-201ENSMUST00000120055 759 ntBASIC5.47□□□□□ -1.53
Lire1P11260 Gm13677-201ENSMUST00000120739 595 ntBASIC5.47□□□□□ -1.53
Lire1P11260 Hmgb1-ps5-201ENSMUST00000121058 557 ntBASIC5.47□□□□□ -1.53
Lire1P11260 2010013B24Rik-201ENSMUST00000126922 747 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
Lire1P11260 Gm16208-201ENSMUST00000128476 471 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
Lire1P11260 Hba-ps4-201ENSMUST00000128900 447 ntBASIC5.47□□□□□ -1.53
Lire1P11260 Gm12259-201ENSMUST00000138391 328 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
Lire1P11260 Gm25459-201ENSMUST00000157953 114 ntBASIC5.47□□□□□ -1.53
Lire1P11260 Gm24359-201ENSMUST00000158418 221 ntBASIC5.47□□□□□ -1.53
Lire1P11260 Vmn1r176-201ENSMUST00000171073 915 ntAPPRIS P1 BASIC5.47□□□□□ -1.53
Lire1P11260 Mir3572-201ENSMUST00000175549 86 ntBASIC5.47□□□□□ -1.53
Lire1P11260 Pkib-211ENSMUST00000177473 525 ntAPPRIS P1 TSL 3 BASIC5.47□□□□□ -1.53
Lire1P11260 Gm25065-201ENSMUST00000177914 132 ntBASIC5.47□□□□□ -1.53
Lire1P11260 Gm21756-201ENSMUST00000178380 930 ntBASIC5.47□□□□□ -1.53
Lire1P11260 Gm21405-201ENSMUST00000179024 930 ntBASIC5.47□□□□□ -1.53
Lire1P11260 Gm25891-201ENSMUST00000180050 132 ntBASIC5.47□□□□□ -1.53
Lire1P11260 Gm21971-201ENSMUST00000180187 337 ntTSL 5 BASIC5.47□□□□□ -1.53
Lire1P11260 Gm26715-201ENSMUST00000181676 1095 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
Lire1P11260 Gm21191-201ENSMUST00000186484 930 ntBASIC5.47□□□□□ -1.53
Lire1P11260 Gm8419-201ENSMUST00000189886 412 ntBASIC5.47□□□□□ -1.53
Lire1P11260 Gm19280-201ENSMUST00000190191 205 ntBASIC5.47□□□□□ -1.53
Lire1P11260 Gm28490-202ENSMUST00000190946 930 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
Lire1P11260 Gm29503-201ENSMUST00000191044 930 ntBASIC5.47□□□□□ -1.53
Lire1P11260 Gm37386-201ENSMUST00000194755 72 ntTSL 5 BASIC5.47□□□□□ -1.53
Lire1P11260 Gm5660-201ENSMUST00000197453 1149 ntBASIC5.47□□□□□ -1.53
Lire1P11260 Gm43215-201ENSMUST00000199108 252 ntBASIC5.47□□□□□ -1.53
Retrieved 100 of 76,532 protein–RNA pairs in 110.6 ms