Protein–RNA interactions for Protein: P0C0A3

Chmp6, Charged multivesicular body protein 6, mousemouse

Predictions only

Length 200 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp6P0C0A3 Senp7-203ENSMUST00000089362 4825 ntAPPRIS P2 TSL 1 (best) BASIC5.75□□□□□ -1.49
Chmp6P0C0A3 Gm45819-201ENSMUST00000210940 1751 ntBASIC5.75□□□□□ -1.49
Chmp6P0C0A3 Polk-201ENSMUST00000022172 4225 ntAPPRIS P2 TSL 1 (best) BASIC5.75□□□□□ -1.49
Chmp6P0C0A3 Vmn2r2-202ENSMUST00000177151 2727 ntAPPRIS ALT2 TSL 5 BASIC5.75□□□□□ -1.49
Chmp6P0C0A3 Gm19136-201ENSMUST00000190706 2067 ntBASIC5.75□□□□□ -1.49
Chmp6P0C0A3 Zfp605-201ENSMUST00000086686 2085 ntAPPRIS P1 TSL 3 BASIC5.75□□□□□ -1.49
Chmp6P0C0A3 Zfp951-202ENSMUST00000186219 2904 ntAPPRIS P2 TSL 5 BASIC5.75□□□□□ -1.49
Chmp6P0C0A3 Dst-215ENSMUST00000185269 16340 ntTSL 5 BASIC5.74□□□□□ -1.49
Chmp6P0C0A3 AC144772.1-201ENSMUST00000226372 2398 ntBASIC5.74□□□□□ -1.49
Chmp6P0C0A3 AC155941.5-201ENSMUST00000218925 1505 ntTSL 5 BASIC5.74□□□□□ -1.49
Chmp6P0C0A3 Vps41-201ENSMUST00000072961 3199 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
Chmp6P0C0A3 Gabrg2-202ENSMUST00000070735 2234 ntAPPRIS P4 TSL 1 (best) BASIC5.74□□□□□ -1.49
Chmp6P0C0A3 Tmem72-201ENSMUST00000056623 17152 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
Chmp6P0C0A3 Gm4342-201ENSMUST00000118982 367 ntBASIC5.74□□□□□ -1.49
Chmp6P0C0A3 Gm15803-201ENSMUST00000120118 394 ntBASIC5.74□□□□□ -1.49
Chmp6P0C0A3 4930519D14Rik-201ENSMUST00000151471 1137 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
Chmp6P0C0A3 Mir5128-201ENSMUST00000175217 84 ntBASIC5.74□□□□□ -1.49
Chmp6P0C0A3 Obox4-ps11-201ENSMUST00000176150 724 ntBASIC5.74□□□□□ -1.49
Chmp6P0C0A3 Gm3428-201ENSMUST00000183450 521 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
Chmp6P0C0A3 Gm38326-201ENSMUST00000194030 686 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
Chmp6P0C0A3 9430087B13Rik-201ENSMUST00000196548 1085 ntBASIC5.74□□□□□ -1.49
Chmp6P0C0A3 Gm9332-201ENSMUST00000198431 730 ntBASIC5.74□□□□□ -1.49
Chmp6P0C0A3 Gm43685-201ENSMUST00000198876 706 ntTSL 3 BASIC5.74□□□□□ -1.49
Chmp6P0C0A3 Gm43554-201ENSMUST00000199987 186 ntBASIC5.74□□□□□ -1.49
Chmp6P0C0A3 Gm15754-202ENSMUST00000202846 758 ntTSL 3 BASIC5.74□□□□□ -1.49
Chmp6P0C0A3 9530003J23Rik-201ENSMUST00000020392 1233 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
Chmp6P0C0A3 Gm7688-201ENSMUST00000212857 337 ntBASIC5.74□□□□□ -1.49
Chmp6P0C0A3 C230072F16Rik-203ENSMUST00000220322 1136 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
Chmp6P0C0A3 CT010575.2-201ENSMUST00000222876 496 ntTSL 2 BASIC5.74□□□□□ -1.49
Chmp6P0C0A3 Thoc7-209ENSMUST00000225325 765 ntBASIC5.74□□□□□ -1.49
Chmp6P0C0A3 Gm23511-201ENSMUST00000083084 164 ntBASIC5.74□□□□□ -1.49
Chmp6P0C0A3 Olfr878-201ENSMUST00000086061 1065 ntBASIC5.74□□□□□ -1.49
Chmp6P0C0A3 Gm37738-201ENSMUST00000192396 4716 ntBASIC5.74□□□□□ -1.49
Chmp6P0C0A3 Gm37780-201ENSMUST00000194117 1873 ntBASIC5.74□□□□□ -1.49
Chmp6P0C0A3 Olfr690-203ENSMUST00000216230 2085 ntAPPRIS P1 TSL 5 BASIC5.74□□□□□ -1.49
Chmp6P0C0A3 Malrd1-201ENSMUST00000146205 6738 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
Chmp6P0C0A3 Senp8-202ENSMUST00000163586 3570 ntAPPRIS P3 TSL 1 (best) BASIC5.74□□□□□ -1.49
Chmp6P0C0A3 Olfr273-202ENSMUST00000107670 4796 ntAPPRIS P1 TSL 5 BASIC5.74□□□□□ -1.49
Chmp6P0C0A3 Far1-202ENSMUST00000067929 4935 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
Chmp6P0C0A3 Gm37400-201ENSMUST00000193148 3605 ntBASIC5.74□□□□□ -1.49
Chmp6P0C0A3 Cep112os1-201ENSMUST00000137907 3005 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
Chmp6P0C0A3 Gm1720-201ENSMUST00000135086 1503 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
Chmp6P0C0A3 Hgf-204ENSMUST00000199581 3468 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
Chmp6P0C0A3 Erbin-204ENSMUST00000169083 5435 ntAPPRIS ALT2 TSL 1 (best) BASIC5.73□□□□□ -1.49
Chmp6P0C0A3 Olfr293-202ENSMUST00000214401 2852 ntAPPRIS P1 TSL 5 BASIC5.73□□□□□ -1.49
Chmp6P0C0A3 Ireb2-201ENSMUST00000034843 5770 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
Chmp6P0C0A3 Zgrf1-202ENSMUST00000195955 3804 ntTSL 2 BASIC5.73□□□□□ -1.49
Chmp6P0C0A3 Gm44801-201ENSMUST00000207644 2060 ntBASIC5.73□□□□□ -1.49
Chmp6P0C0A3 Gm42860-201ENSMUST00000196492 3991 ntBASIC5.73□□□□□ -1.49
Chmp6P0C0A3 Gm43169-201ENSMUST00000199544 4734 ntBASIC5.73□□□□□ -1.49
Chmp6P0C0A3 Olfr1268-ps1-201ENSMUST00000117787 2501 ntAPPRIS P1 TSL 5 BASIC5.73□□□□□ -1.49
Chmp6P0C0A3 Gm5725-201ENSMUST00000105195 924 ntAPPRIS P1 BASIC5.73□□□□□ -1.49
Chmp6P0C0A3 Gm11975-201ENSMUST00000118772 481 ntBASIC5.73□□□□□ -1.49
Chmp6P0C0A3 Gm3931-201ENSMUST00000119038 455 ntBASIC5.73□□□□□ -1.49
Chmp6P0C0A3 Gm13506-201ENSMUST00000120391 1083 ntBASIC5.73□□□□□ -1.49
Chmp6P0C0A3 Gm15428-201ENSMUST00000121352 333 ntBASIC5.73□□□□□ -1.49
Chmp6P0C0A3 Gm12650-201ENSMUST00000121966 258 ntBASIC5.73□□□□□ -1.49
Chmp6P0C0A3 Gm16208-201ENSMUST00000128476 471 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
Chmp6P0C0A3 Stau2-208ENSMUST00000144138 585 ntTSL 5 BASIC5.73□□□□□ -1.49
Chmp6P0C0A3 Gm14330-201ENSMUST00000155455 455 ntTSL 5 BASIC5.73□□□□□ -1.49
Chmp6P0C0A3 Scarna13-201ENSMUST00000158164 275 ntBASIC5.73□□□□□ -1.49
Chmp6P0C0A3 Gm22326-201ENSMUST00000158897 351 ntBASIC5.73□□□□□ -1.49
Chmp6P0C0A3 Vmn1r129-201ENSMUST00000165961 924 ntAPPRIS P1 BASIC5.73□□□□□ -1.49
Chmp6P0C0A3 Gm8720-201ENSMUST00000168392 924 ntAPPRIS P1 BASIC5.73□□□□□ -1.49
Chmp6P0C0A3 Rps19-ps12-201ENSMUST00000181937 430 ntBASIC5.73□□□□□ -1.49
Chmp6P0C0A3 Gm5946-201ENSMUST00000182340 970 ntBASIC5.73□□□□□ -1.49
Chmp6P0C0A3 Gm27781-201ENSMUST00000185185 92 ntBASIC5.73□□□□□ -1.49
Chmp6P0C0A3 Rhoay-ps2-201ENSMUST00000186362 581 ntBASIC5.73□□□□□ -1.49
Chmp6P0C0A3 Gm2325-201ENSMUST00000186637 581 ntBASIC5.73□□□□□ -1.49
Chmp6P0C0A3 Gm6137-201ENSMUST00000187552 578 ntBASIC5.73□□□□□ -1.49
Chmp6P0C0A3 Gm9057-201ENSMUST00000198791 296 ntBASIC5.73□□□□□ -1.49
Chmp6P0C0A3 Gm45721-201ENSMUST00000212267 607 ntTSL 3 BASIC5.73□□□□□ -1.49
Chmp6P0C0A3 AC159821.1-201ENSMUST00000214934 248 ntTSL 3 BASIC5.73□□□□□ -1.49
Chmp6P0C0A3 AC110381.1-201ENSMUST00000218987 586 ntBASIC5.73□□□□□ -1.49
Chmp6P0C0A3 AC153548.2-201ENSMUST00000219770 885 ntBASIC5.73□□□□□ -1.49
Chmp6P0C0A3 AC166358.9-201ENSMUST00000220653 375 ntBASIC5.73□□□□□ -1.49
Chmp6P0C0A3 Gm7768-201ENSMUST00000222988 597 ntBASIC5.73□□□□□ -1.49
Chmp6P0C0A3 AC102291.1-201ENSMUST00000227164 529 ntBASIC5.73□□□□□ -1.49
Chmp6P0C0A3 Orm3-201ENSMUST00000006687 773 ntAPPRIS P1 TSL 5 BASIC5.73□□□□□ -1.49
Chmp6P0C0A3 Rpl21-ps13-201ENSMUST00000072532 483 ntBASIC5.73□□□□□ -1.49
Chmp6P0C0A3 Gm23508-201ENSMUST00000083079 72 ntBASIC5.73□□□□□ -1.49
Chmp6P0C0A3 Gm10705-201ENSMUST00000098980 461 ntBASIC5.73□□□□□ -1.49
Chmp6P0C0A3 Fam126b-207ENSMUST00000161600 8685 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
Chmp6P0C0A3 Zfyve9-203ENSMUST00000106658 5987 ntAPPRIS ALT2 TSL 5 BASIC5.73□□□□□ -1.49
Chmp6P0C0A3 Lcor-202ENSMUST00000163929 4663 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
Chmp6P0C0A3 Zfp184-205ENSMUST00000176511 2703 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
Chmp6P0C0A3 Olfr510-204ENSMUST00000217170 2997 ntAPPRIS P1 TSL 5 BASIC5.73□□□□□ -1.49
Chmp6P0C0A3 Vmn1r37-202ENSMUST00000226311 1305 ntBASIC5.73□□□□□ -1.49
Chmp6P0C0A3 Zan-204ENSMUST00000164178 16451 ntAPPRIS P1 TSL 5 BASIC5.73□□□□□ -1.49
Chmp6P0C0A3 Tnpo1-201ENSMUST00000109399 8445 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
Chmp6P0C0A3 Serpinb5-201ENSMUST00000086701 2572 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
Chmp6P0C0A3 Gm37221-201ENSMUST00000194472 3007 ntBASIC5.72□□□□□ -1.49
Chmp6P0C0A3 Pih1d3-201ENSMUST00000027230 1451 ntAPPRIS P1 BASIC5.72□□□□□ -1.49
Chmp6P0C0A3 Olfr357-202ENSMUST00000213218 5367 ntAPPRIS P1 TSL 5 BASIC5.72□□□□□ -1.49
Chmp6P0C0A3 Gm19035-201ENSMUST00000193299 1742 ntBASIC5.72□□□□□ -1.49
Chmp6P0C0A3 A730004F24Rik-202ENSMUST00000195454 1704 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
Chmp6P0C0A3 4732416N19Rik-201ENSMUST00000203932 3479 ntBASIC5.72□□□□□ -1.49
Chmp6P0C0A3 B4galt4-203ENSMUST00000114710 837 ntTSL 3 BASIC5.72□□□□□ -1.49
Chmp6P0C0A3 Hbb-bh3-201ENSMUST00000118954 266 ntBASIC5.72□□□□□ -1.49
Chmp6P0C0A3 Gm13489-201ENSMUST00000121234 971 ntBASIC5.72□□□□□ -1.49
Retrieved 100 of 76,532 protein–RNA pairs in 71.3 ms