Protein–RNA interactions for Protein: O54879

Hmgb3, High mobility group protein B3, mousemouse

Known RBP Predictions only

Length 200 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmgb3O54879 Gm38217-201ENSMUST00000194358 910 ntBASIC4.2□□□□□ -1.74
Hmgb3O54879 Gm37883-201ENSMUST00000194970 725 ntBASIC4.2□□□□□ -1.74
Hmgb3O54879 Gm20239-201ENSMUST00000196610 982 ntBASIC4.2□□□□□ -1.74
Hmgb3O54879 Gm29745-201ENSMUST00000198005 687 ntBASIC4.2□□□□□ -1.74
Hmgb3O54879 Gm34549-202ENSMUST00000207356 970 ntTSL 5 BASIC4.2□□□□□ -1.74
Hmgb3O54879 Gm44820-201ENSMUST00000207420 396 ntBASIC4.2□□□□□ -1.74
Hmgb3O54879 Gm4587-201ENSMUST00000209135 637 ntBASIC4.2□□□□□ -1.74
Hmgb3O54879 Gm38590-201ENSMUST00000209515 970 ntTSL 5 BASIC4.2□□□□□ -1.74
Hmgb3O54879 Gm45494-201ENSMUST00000211167 545 ntTSL 3 BASIC4.2□□□□□ -1.74
Hmgb3O54879 Gm45850-201ENSMUST00000212536 338 ntBASIC4.2□□□□□ -1.74
Hmgb3O54879 AC121264.1-201ENSMUST00000214412 269 ntTSL 5 BASIC4.2□□□□□ -1.74
Hmgb3O54879 AC153532.3-201ENSMUST00000218660 3848 ntBASIC4.2□□□□□ -1.74
Hmgb3O54879 Ctla2b-201ENSMUST00000021884 842 ntAPPRIS P4 TSL 1 (best) BASIC4.2□□□□□ -1.74
Hmgb3O54879 AC122301.1-201ENSMUST00000219625 507 ntBASIC4.2□□□□□ -1.74
Hmgb3O54879 AC163621.3-201ENSMUST00000221738 1033 ntTSL 5 BASIC4.2□□□□□ -1.74
Hmgb3O54879 AC121599.1-201ENSMUST00000224276 449 ntBASIC4.2□□□□□ -1.74
Hmgb3O54879 AC156559.2-201ENSMUST00000224403 384 ntBASIC4.2□□□□□ -1.74
Hmgb3O54879 AC165092.2-201ENSMUST00000224681 368 ntBASIC4.2□□□□□ -1.74
Hmgb3O54879 AC125019.1-201ENSMUST00000224809 908 ntBASIC4.2□□□□□ -1.74
Hmgb3O54879 Gm5830-201ENSMUST00000049117 443 ntBASIC4.2□□□□□ -1.74
Hmgb3O54879 Vmn1r67-201ENSMUST00000055964 999 ntAPPRIS P2 BASIC4.2□□□□□ -1.74
Hmgb3O54879 Rnase2a-201ENSMUST00000061936 690 ntAPPRIS P1 TSL 1 (best) BASIC4.2□□□□□ -1.74
Hmgb3O54879 Vmn1r215-201ENSMUST00000072972 1048 ntAPPRIS P1 BASIC4.2□□□□□ -1.74
Hmgb3O54879 Gm22351-201ENSMUST00000083925 107 ntBASIC4.2□□□□□ -1.74
Hmgb3O54879 Olfr859-201ENSMUST00000086480 930 ntAPPRIS P1 BASIC4.2□□□□□ -1.74
Hmgb3O54879 Vmn1r20-202ENSMUST00000227909 3709 ntAPPRIS P1 BASIC4.2□□□□□ -1.74
Hmgb3O54879 Gm37514-201ENSMUST00000194512 2753 ntBASIC4.2□□□□□ -1.74
Hmgb3O54879 Agps-203ENSMUST00000175646 1839 ntAPPRIS ALT2 TSL 5 BASIC4.2□□□□□ -1.74
Hmgb3O54879 Zscan4-ps3-201ENSMUST00000210559 2277 ntAPPRIS P1 TSL 5 BASIC4.2□□□□□ -1.74
Hmgb3O54879 Cep57l1-201ENSMUST00000019951 2177 ntAPPRIS ALT2 TSL 5 BASIC4.2□□□□□ -1.74
Hmgb3O54879 CT009696.3-201ENSMUST00000215342 2184 ntTSL 3 BASIC4.2□□□□□ -1.74
Hmgb3O54879 Gm3278-201ENSMUST00000164459 1500 ntAPPRIS P1 TSL 5 BASIC4.2□□□□□ -1.74
Hmgb3O54879 Olfr1471-205ENSMUST00000217482 1545 ntAPPRIS P1 TSL 5 BASIC4.2□□□□□ -1.74
Hmgb3O54879 Gm37558-201ENSMUST00000193684 2983 ntBASIC4.2□□□□□ -1.74
Hmgb3O54879 Gm43654-201ENSMUST00000200664 3417 ntBASIC4.2□□□□□ -1.74
Hmgb3O54879 Gm37696-201ENSMUST00000194223 3349 ntBASIC4.2□□□□□ -1.74
Hmgb3O54879 Cnot2-213ENSMUST00000169921 2120 ntAPPRIS P1 TSL 1 (best) BASIC4.19□□□□□ -1.74
Hmgb3O54879 Mtm1-213ENSMUST00000171933 3488 ntAPPRIS P1 TSL 1 (best) BASIC4.19□□□□□ -1.74
Hmgb3O54879 Gm43209-201ENSMUST00000198949 1588 ntBASIC4.19□□□□□ -1.74
Hmgb3O54879 Rprd2-202ENSMUST00000197449 3298 ntAPPRIS ALT2 TSL 1 (best) BASIC4.19□□□□□ -1.74
Hmgb3O54879 Gm26753-201ENSMUST00000181938 2731 ntTSL 1 (best) BASIC4.19□□□□□ -1.74
Hmgb3O54879 Mageb16-202ENSMUST00000114016 1725 ntAPPRIS P1 TSL 1 (best) BASIC4.19□□□□□ -1.74
Hmgb3O54879 Gm18852-201ENSMUST00000184149 3593 ntBASIC4.19□□□□□ -1.74
Hmgb3O54879 Mir290a-201ENSMUST00000104627 83 ntBASIC4.19□□□□□ -1.74
Hmgb3O54879 Lrrc51-207ENSMUST00000106967 675 ntTSL 3 BASIC4.19□□□□□ -1.74
Hmgb3O54879 Dbi-202ENSMUST00000112648 504 ntTSL 2 BASIC4.19□□□□□ -1.74
Hmgb3O54879 S100a9-202ENSMUST00000117167 519 ntAPPRIS P1 TSL 1 (best) BASIC4.19□□□□□ -1.74
Hmgb3O54879 Gm13195-201ENSMUST00000117229 261 ntBASIC4.19□□□□□ -1.74
Hmgb3O54879 Gm12193-201ENSMUST00000117250 379 ntBASIC4.19□□□□□ -1.74
Hmgb3O54879 Olfr1159-ps1-201ENSMUST00000117651 913 ntBASIC4.19□□□□□ -1.74
Hmgb3O54879 Ttc29-203ENSMUST00000117845 650 ntTSL 1 (best) BASIC4.19□□□□□ -1.74
Hmgb3O54879 Gm4989-201ENSMUST00000118711 749 ntBASIC4.19□□□□□ -1.74
Hmgb3O54879 Gm16420-201ENSMUST00000120258 856 ntBASIC4.19□□□□□ -1.74
Hmgb3O54879 1700019G24Rik-201ENSMUST00000130004 503 ntTSL 1 (best) BASIC4.19□□□□□ -1.74
Hmgb3O54879 Gm26346-201ENSMUST00000157525 329 ntBASIC4.19□□□□□ -1.74
Hmgb3O54879 Gm25348-201ENSMUST00000158961 111 ntBASIC4.19□□□□□ -1.74
Hmgb3O54879 Gm16139-201ENSMUST00000160015 420 ntBASIC4.19□□□□□ -1.74
Hmgb3O54879 4930556I23Rik-201ENSMUST00000160659 560 ntTSL 1 (best) BASIC4.19□□□□□ -1.74
Hmgb3O54879 Gm4134-201ENSMUST00000173244 563 ntBASIC4.19□□□□□ -1.74
Hmgb3O54879 Gm22932-201ENSMUST00000175510 72 ntBASIC4.19□□□□□ -1.74
Hmgb3O54879 AF067063-201ENSMUST00000179455 590 ntAPPRIS P1 BASIC4.19□□□□□ -1.74
Hmgb3O54879 Rps12-ps24-201ENSMUST00000182321 381 ntBASIC4.19□□□□□ -1.74
Hmgb3O54879 Gm43655-201ENSMUST00000197367 222 ntBASIC4.19□□□□□ -1.74
Hmgb3O54879 Gm42663-201ENSMUST00000199883 351 ntBASIC4.19□□□□□ -1.74
Hmgb3O54879 Gm18011-201ENSMUST00000203717 565 ntBASIC4.19□□□□□ -1.74
Hmgb3O54879 Gm44673-201ENSMUST00000205692 996 ntBASIC4.19□□□□□ -1.74
Hmgb3O54879 Glud-ps-201ENSMUST00000206310 657 ntBASIC4.19□□□□□ -1.74
Hmgb3O54879 Gm5750-201ENSMUST00000218711 801 ntBASIC4.19□□□□□ -1.74
Hmgb3O54879 Olfr779-202ENSMUST00000222301 929 ntAPPRIS P5 BASIC4.19□□□□□ -1.74
Hmgb3O54879 AC161586.1-201ENSMUST00000223232 547 ntBASIC4.19□□□□□ -1.74
Hmgb3O54879 AC164426.1-201ENSMUST00000225745 929 ntBASIC4.19□□□□□ -1.74
Hmgb3O54879 CT009556.1-201ENSMUST00000227282 449 ntBASIC4.19□□□□□ -1.74
Hmgb3O54879 AC154806.3-201ENSMUST00000227376 439 ntBASIC4.19□□□□□ -1.74
Hmgb3O54879 Vmn1r70-201ENSMUST00000055847 897 ntAPPRIS P2 BASIC4.19□□□□□ -1.74
Hmgb3O54879 S100a9-201ENSMUST00000069960 512 ntAPPRIS P1 TSL 1 (best) BASIC4.19□□□□□ -1.74
Hmgb3O54879 Olfr532-201ENSMUST00000073226 930 ntAPPRIS P1 BASIC4.19□□□□□ -1.74
Hmgb3O54879 Gm6990-201ENSMUST00000086830 348 ntBASIC4.19□□□□□ -1.74
Hmgb3O54879 Kncn-201ENSMUST00000097918 951 ntAPPRIS P1 TSL 1 (best) BASIC4.19□□□□□ -1.74
Hmgb3O54879 Gm4954-201ENSMUST00000135069 1601 ntBASIC4.19□□□□□ -1.74
Hmgb3O54879 D030025E07Rik-203ENSMUST00000197413 2346 ntTSL 1 (best) BASIC4.19□□□□□ -1.74
Hmgb3O54879 Gm37971-201ENSMUST00000193516 3391 ntTSL 1 (best) BASIC4.19□□□□□ -1.74
Hmgb3O54879 Adgrg4-204ENSMUST00000153784 9329 ntAPPRIS P5 TSL 5 BASIC4.19□□□□□ -1.74
Hmgb3O54879 Tlr6-201ENSMUST00000062315 3677 ntAPPRIS P1 TSL 1 (best) BASIC4.19□□□□□ -1.74
Hmgb3O54879 Gm21655-202ENSMUST00000199295 2975 ntTSL 5 BASIC4.19□□□□□ -1.74
Hmgb3O54879 Gm21680-201ENSMUST00000200447 2975 ntAPPRIS P1 TSL 5 BASIC4.19□□□□□ -1.74
Hmgb3O54879 Gm20756-202ENSMUST00000201324 1565 ntTSL 1 (best) BASIC4.19□□□□□ -1.74
Hmgb3O54879 Rmi1-204ENSMUST00000225815 2447 ntAPPRIS P1 BASIC4.19□□□□□ -1.74
Hmgb3O54879 Map3k19-201ENSMUST00000061512 3936 ntAPPRIS P2 TSL 5 BASIC4.18□□□□□ -1.74
Hmgb3O54879 Gm5715-201ENSMUST00000196854 1465 ntBASIC4.18□□□□□ -1.74
Hmgb3O54879 Capn6-201ENSMUST00000087316 3561 ntAPPRIS P1 TSL 1 (best) BASIC4.18□□□□□ -1.74
Hmgb3O54879 1700061I17Rik-201ENSMUST00000029642 1962 ntTSL 1 (best) BASIC4.18□□□□□ -1.74
Hmgb3O54879 Gm44827-201ENSMUST00000207963 2229 ntTSL 5 BASIC4.18□□□□□ -1.74
Hmgb3O54879 Traj25-201ENSMUST00000103716 57 ntAPPRIS P1 BASIC4.18□□□□□ -1.74
Hmgb3O54879 Gm25917-201ENSMUST00000104267 130 ntBASIC4.18□□□□□ -1.74
Hmgb3O54879 Gm13103-202ENSMUST00000105768 994 ntAPPRIS ALT2 TSL 2 BASIC4.18□□□□□ -1.74
Hmgb3O54879 Cd200r3-204ENSMUST00000114612 731 ntTSL 1 (best) BASIC4.18□□□□□ -1.74
Hmgb3O54879 Gm14106-201ENSMUST00000119382 438 ntBASIC4.18□□□□□ -1.74
Hmgb3O54879 Gm15331-201ENSMUST00000120225 385 ntBASIC4.18□□□□□ -1.74
Hmgb3O54879 Gm16200-201ENSMUST00000120385 331 ntBASIC4.18□□□□□ -1.74
Hmgb3O54879 Gm13669-201ENSMUST00000122366 457 ntBASIC4.18□□□□□ -1.74
Retrieved 100 of 76,532 protein–RNA pairs in 73.2 ms