Protein–RNA interactions for Protein: S4R1M3

H2afb2, Histone H2A, mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H2afb2S4R1M3 Gm28216-201ENSMUST00000188785 174 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
H2afb2S4R1M3 Gm29645-201ENSMUST00000189117 174 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
H2afb2S4R1M3 Gm29201-201ENSMUST00000189120 431 ntBASIC5.22□□□□□ -1.57
H2afb2S4R1M3 Gm28554-202ENSMUST00000189175 484 ntBASIC5.22□□□□□ -1.57
H2afb2S4R1M3 Gm21413-201ENSMUST00000189224 174 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
H2afb2S4R1M3 Gm21723-202ENSMUST00000189444 174 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
H2afb2S4R1M3 Gm36782-201ENSMUST00000189459 174 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
H2afb2S4R1M3 Gm21419-201ENSMUST00000189495 173 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
H2afb2S4R1M3 Gm28566-202ENSMUST00000189532 174 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
H2afb2S4R1M3 Gm29213-202ENSMUST00000189703 484 ntBASIC5.22□□□□□ -1.57
H2afb2S4R1M3 Gm21626-202ENSMUST00000189751 174 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
H2afb2S4R1M3 Gm28851-202ENSMUST00000189757 484 ntBASIC5.22□□□□□ -1.57
H2afb2S4R1M3 Gm28656-201ENSMUST00000190017 174 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
H2afb2S4R1M3 Gm28461-201ENSMUST00000190023 484 ntBASIC5.22□□□□□ -1.57
H2afb2S4R1M3 Gm21562-202ENSMUST00000190314 174 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
H2afb2S4R1M3 Gm28517-201ENSMUST00000190343 174 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
H2afb2S4R1M3 Gm29531-201ENSMUST00000190569 174 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
H2afb2S4R1M3 Gm21914-202ENSMUST00000190577 174 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
H2afb2S4R1M3 Gm20978-201ENSMUST00000190688 174 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
H2afb2S4R1M3 Gm20963-201ENSMUST00000190880 174 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
H2afb2S4R1M3 Gm29316-201ENSMUST00000190953 174 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
H2afb2S4R1M3 Gm29351-201ENSMUST00000191052 174 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
H2afb2S4R1M3 Gm29466-201ENSMUST00000191077 174 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
H2afb2S4R1M3 Gm20987-201ENSMUST00000191165 174 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
H2afb2S4R1M3 Gm28194-202ENSMUST00000191217 174 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
H2afb2S4R1M3 Gm28461-202ENSMUST00000191406 174 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
H2afb2S4R1M3 Gm37927-201ENSMUST00000192238 174 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
H2afb2S4R1M3 Gm37700-201ENSMUST00000192617 965 ntBASIC5.22□□□□□ -1.57
H2afb2S4R1M3 Gm37544-201ENSMUST00000192803 174 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
H2afb2S4R1M3 Gm37635-201ENSMUST00000193129 174 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
H2afb2S4R1M3 Gm21809-202ENSMUST00000194072 174 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
H2afb2S4R1M3 Lrrc72-201ENSMUST00000020853 660 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
H2afb2S4R1M3 Gm45874-201ENSMUST00000212423 346 ntBASIC5.22□□□□□ -1.57
H2afb2S4R1M3 Gm36543-201ENSMUST00000217933 542 ntTSL 5 BASIC5.22□□□□□ -1.57
H2afb2S4R1M3 AC159379.1-201ENSMUST00000218192 620 ntTSL 5 BASIC5.22□□□□□ -1.57
H2afb2S4R1M3 AC162467.1-201ENSMUST00000220254 621 ntBASIC5.22□□□□□ -1.57
H2afb2S4R1M3 Gm40392-201ENSMUST00000220656 562 ntTSL 5 BASIC5.22□□□□□ -1.57
H2afb2S4R1M3 CT030182.2-201ENSMUST00000223569 620 ntBASIC5.22□□□□□ -1.57
H2afb2S4R1M3 AC121599.1-201ENSMUST00000224276 449 ntBASIC5.22□□□□□ -1.57
H2afb2S4R1M3 Fhl5-201ENSMUST00000029922 1106 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
H2afb2S4R1M3 Olfr801-201ENSMUST00000072063 957 ntAPPRIS P1 BASIC5.22□□□□□ -1.57
H2afb2S4R1M3 n-R5s62-201ENSMUST00000082780 96 ntBASIC5.22□□□□□ -1.57
H2afb2S4R1M3 Mir449a-201ENSMUST00000083641 91 ntBASIC5.22□□□□□ -1.57
H2afb2S4R1M3 Kncn-201ENSMUST00000097918 951 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
H2afb2S4R1M3 Vmn1r175-202ENSMUST00000228383 2878 ntAPPRIS P1 BASIC5.22□□□□□ -1.57
H2afb2S4R1M3 Dnase2b-202ENSMUST00000200633 2685 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
H2afb2S4R1M3 Gm37212-201ENSMUST00000192582 3650 ntBASIC5.22□□□□□ -1.57
H2afb2S4R1M3 Gm6645-201ENSMUST00000118505 2726 ntBASIC5.22□□□□□ -1.57
H2afb2S4R1M3 Gm43887-201ENSMUST00000204727 3186 ntBASIC5.22□□□□□ -1.57
H2afb2S4R1M3 Slco1c1-203ENSMUST00000203140 2771 ntAPPRIS ALT2 TSL 5 BASIC5.21□□□□□ -1.57
H2afb2S4R1M3 Tmem72-201ENSMUST00000056623 17152 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.57
H2afb2S4R1M3 Ttc39d-201ENSMUST00000053168 2022 ntAPPRIS P1 BASIC5.21□□□□□ -1.57
H2afb2S4R1M3 Vmn1r171-201ENSMUST00000078458 1581 ntAPPRIS P2 BASIC5.21□□□□□ -1.57
H2afb2S4R1M3 Atp1b4-202ENSMUST00000115134 4189 ntTSL 1 (best) BASIC5.21□□□□□ -1.57
H2afb2S4R1M3 Muc15-203ENSMUST00000111017 3095 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
H2afb2S4R1M3 5430403G16Rik-201ENSMUST00000092720 3341 ntAPPRIS P1 TSL 5 BASIC5.21□□□□□ -1.58
H2afb2S4R1M3 Cnga1-205ENSMUST00000201463 2510 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
H2afb2S4R1M3 Cul3-202ENSMUST00000164108 2442 ntTSL 5 BASIC5.21□□□□□ -1.58
H2afb2S4R1M3 Ccdc66-202ENSMUST00000223689 4262 ntAPPRIS P2 BASIC5.21□□□□□ -1.58
H2afb2S4R1M3 Mir292-201ENSMUST00000104847 82 ntBASIC5.21□□□□□ -1.58
H2afb2S4R1M3 Cd59b-202ENSMUST00000111130 706 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
H2afb2S4R1M3 Ncald-202ENSMUST00000116445 858 ntAPPRIS P1 TSL 3 BASIC5.21□□□□□ -1.58
H2afb2S4R1M3 Ap3s1-ps1-201ENSMUST00000117113 579 ntBASIC5.21□□□□□ -1.58
H2afb2S4R1M3 Gm7670-201ENSMUST00000121272 641 ntBASIC5.21□□□□□ -1.58
H2afb2S4R1M3 Ftx-201ENSMUST00000123841 673 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
H2afb2S4R1M3 Gm24236-201ENSMUST00000157794 134 ntBASIC5.21□□□□□ -1.58
H2afb2S4R1M3 Gm23115-201ENSMUST00000158480 108 ntBASIC5.21□□□□□ -1.58
H2afb2S4R1M3 Vmn1r-ps64-201ENSMUST00000173746 655 ntBASIC5.21□□□□□ -1.58
H2afb2S4R1M3 Ap3s1-ps2-201ENSMUST00000178107 579 ntBASIC5.21□□□□□ -1.58
H2afb2S4R1M3 Gm4221-201ENSMUST00000181538 1232 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
H2afb2S4R1M3 Gm27266-201ENSMUST00000184521 123 ntBASIC5.21□□□□□ -1.58
H2afb2S4R1M3 Gm28943-201ENSMUST00000186187 615 ntBASIC5.21□□□□□ -1.58
H2afb2S4R1M3 Gm28736-201ENSMUST00000186257 615 ntBASIC5.21□□□□□ -1.58
H2afb2S4R1M3 Gm29401-201ENSMUST00000186690 615 ntBASIC5.21□□□□□ -1.58
H2afb2S4R1M3 Gm29178-204ENSMUST00000186784 615 ntBASIC5.21□□□□□ -1.58
H2afb2S4R1M3 Gm28589-201ENSMUST00000186991 615 ntBASIC5.21□□□□□ -1.58
H2afb2S4R1M3 Gm28683-201ENSMUST00000187134 615 ntBASIC5.21□□□□□ -1.58
H2afb2S4R1M3 Gm28936-201ENSMUST00000187153 615 ntBASIC5.21□□□□□ -1.58
H2afb2S4R1M3 Gm29121-201ENSMUST00000187611 615 ntBASIC5.21□□□□□ -1.58
H2afb2S4R1M3 Gm28243-201ENSMUST00000187801 615 ntBASIC5.21□□□□□ -1.58
H2afb2S4R1M3 Gm28844-202ENSMUST00000187977 615 ntBASIC5.21□□□□□ -1.58
H2afb2S4R1M3 Gm28840-205ENSMUST00000189320 615 ntBASIC5.21□□□□□ -1.58
H2afb2S4R1M3 Gm29058-201ENSMUST00000189510 615 ntBASIC5.21□□□□□ -1.58
H2afb2S4R1M3 Gm29624-201ENSMUST00000190018 615 ntBASIC5.21□□□□□ -1.58
H2afb2S4R1M3 Gm28835-203ENSMUST00000190062 615 ntBASIC5.21□□□□□ -1.58
H2afb2S4R1M3 Gm28780-201ENSMUST00000190223 615 ntBASIC5.21□□□□□ -1.58
H2afb2S4R1M3 Gm28969-211ENSMUST00000190992 615 ntBASIC5.21□□□□□ -1.58
H2afb2S4R1M3 Gm28990-207ENSMUST00000191219 615 ntBASIC5.21□□□□□ -1.58
H2afb2S4R1M3 Gm36468-201ENSMUST00000192119 615 ntBASIC5.21□□□□□ -1.58
H2afb2S4R1M3 Gm5285-201ENSMUST00000193089 666 ntBASIC5.21□□□□□ -1.58
H2afb2S4R1M3 Gm31572-201ENSMUST00000193341 615 ntBASIC5.21□□□□□ -1.58
H2afb2S4R1M3 Gm30175-201ENSMUST00000194173 615 ntBASIC5.21□□□□□ -1.58
H2afb2S4R1M3 Gm30858-201ENSMUST00000195516 615 ntBASIC5.21□□□□□ -1.58
H2afb2S4R1M3 Gm44176-201ENSMUST00000204336 276 ntTSL 5 BASIC5.21□□□□□ -1.58
H2afb2S4R1M3 2010107E04Rik-201ENSMUST00000021719 366 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
H2afb2S4R1M3 Gm5750-201ENSMUST00000218711 801 ntBASIC5.21□□□□□ -1.58
H2afb2S4R1M3 AC160120.1-201ENSMUST00000227446 663 ntBASIC5.21□□□□□ -1.58
H2afb2S4R1M3 AC121978.1-201ENSMUST00000228357 380 ntBASIC5.21□□□□□ -1.58
H2afb2S4R1M3 Olfr552-201ENSMUST00000098223 954 ntAPPRIS P1 BASIC5.21□□□□□ -1.58
H2afb2S4R1M3 Gm43696-201ENSMUST00000199385 6071 ntBASIC5.21□□□□□ -1.58
Retrieved 100 of 76,532 protein–RNA pairs in 62.3 ms