Protein–RNA interactions for Protein: S4R1G7

H2afb3, Histone H2A, mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H2afb3S4R1G7 A530053G22Rik-205ENSMUST00000205153 1448 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
H2afb3S4R1G7 Vmn2r115-201ENSMUST00000168175 2574 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
H2afb3S4R1G7 4930444F02Rik-201ENSMUST00000215429 6871 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
H2afb3S4R1G7 Pcdh9-207ENSMUST00000195376 5096 ntTSL 5 BASIC5.19□□□□□ -1.58
H2afb3S4R1G7 Gm37456-201ENSMUST00000193176 5837 ntBASIC5.19□□□□□ -1.58
H2afb3S4R1G7 Vmn1r171-202ENSMUST00000226128 3063 ntAPPRIS ALT2 BASIC5.19□□□□□ -1.58
H2afb3S4R1G7 Gm44886-201ENSMUST00000209009 1304 ntTSL 5 BASIC5.19□□□□□ -1.58
H2afb3S4R1G7 Vmn1r71-210ENSMUST00000228561 4747 ntAPPRIS ALT2 BASIC5.19□□□□□ -1.58
H2afb3S4R1G7 Zfp606-205ENSMUST00000209403 2211 ntAPPRIS ALT2 TSL 5 BASIC5.19□□□□□ -1.58
H2afb3S4R1G7 Gm10635-201ENSMUST00000217201 3721 ntTSL 2 BASIC5.19□□□□□ -1.58
H2afb3S4R1G7 4930550C14Rik-203ENSMUST00000215668 2732 ntAPPRIS ALT2 TSL 1 (best) BASIC5.18□□□□□ -1.58
H2afb3S4R1G7 Olfr670-202ENSMUST00000214216 3729 ntAPPRIS P1 TSL 5 BASIC5.18□□□□□ -1.58
H2afb3S4R1G7 Olfr183-202ENSMUST00000206303 1862 ntAPPRIS P1 TSL 3 BASIC5.18□□□□□ -1.58
H2afb3S4R1G7 AC168274.1-201ENSMUST00000218657 1864 ntTSL 5 BASIC5.18□□□□□ -1.58
H2afb3S4R1G7 Vmn1r86-204ENSMUST00000227700 5487 ntAPPRIS ALT2 BASIC5.18□□□□□ -1.58
H2afb3S4R1G7 Mir449c-201ENSMUST00000102192 109 ntBASIC5.18□□□□□ -1.58
H2afb3S4R1G7 Gm21637-201ENSMUST00000105124 778 ntAPPRIS P1 BASIC5.18□□□□□ -1.58
H2afb3S4R1G7 Vmn1r3-201ENSMUST00000105159 1011 ntAPPRIS P1 BASIC5.18□□□□□ -1.58
H2afb3S4R1G7 Gm14769-201ENSMUST00000118590 432 ntBASIC5.18□□□□□ -1.58
H2afb3S4R1G7 Gm13808-201ENSMUST00000121353 184 ntBASIC5.18□□□□□ -1.58
H2afb3S4R1G7 Gm14679-201ENSMUST00000121536 722 ntBASIC5.18□□□□□ -1.58
H2afb3S4R1G7 Gm12293-201ENSMUST00000121898 590 ntBASIC5.18□□□□□ -1.58
H2afb3S4R1G7 Olfr118-201ENSMUST00000122036 966 ntAPPRIS P1 BASIC5.18□□□□□ -1.58
H2afb3S4R1G7 Gm11358-201ENSMUST00000122310 373 ntBASIC5.18□□□□□ -1.58
H2afb3S4R1G7 Zfp968-203ENSMUST00000131676 1272 ntAPPRIS P1 TSL 2 BASIC5.18□□□□□ -1.58
H2afb3S4R1G7 Saxo1os-201ENSMUST00000131790 628 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
H2afb3S4R1G7 Ugt2a2-202ENSMUST00000144144 929 ntTSL 2 BASIC5.18□□□□□ -1.58
H2afb3S4R1G7 Gm26353-201ENSMUST00000158224 255 ntBASIC5.18□□□□□ -1.58
H2afb3S4R1G7 Gm17024-201ENSMUST00000165676 634 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
H2afb3S4R1G7 Gm7008-203ENSMUST00000171356 476 ntTSL 2 BASIC5.18□□□□□ -1.58
H2afb3S4R1G7 Gm24812-201ENSMUST00000175315 284 ntBASIC5.18□□□□□ -1.58
H2afb3S4R1G7 AA465934-205ENSMUST00000177533 308 ntTSL 2 BASIC5.18□□□□□ -1.58
H2afb3S4R1G7 Gm3500-202ENSMUST00000178058 609 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
H2afb3S4R1G7 Vmn2r-ps16-201ENSMUST00000178737 377 ntBASIC5.18□□□□□ -1.58
H2afb3S4R1G7 Gm17048-201ENSMUST00000179266 847 ntBASIC5.18□□□□□ -1.58
H2afb3S4R1G7 Vmn2r-ps15-201ENSMUST00000180112 377 ntBASIC5.18□□□□□ -1.58
H2afb3S4R1G7 Gm21399-201ENSMUST00000180210 597 ntBASIC5.18□□□□□ -1.58
H2afb3S4R1G7 Gm26851-201ENSMUST00000181867 918 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
H2afb3S4R1G7 Mir7058-201ENSMUST00000184637 75 ntBASIC5.18□□□□□ -1.58
H2afb3S4R1G7 Gm27998-201ENSMUST00000184902 361 ntBASIC5.18□□□□□ -1.58
H2afb3S4R1G7 Gm8498-201ENSMUST00000188227 974 ntBASIC5.18□□□□□ -1.58
H2afb3S4R1G7 Gm5317-201ENSMUST00000204445 847 ntBASIC5.18□□□□□ -1.58
H2afb3S4R1G7 Bsph1-202ENSMUST00000204715 707 ntAPPRIS ALT2 TSL 1 (best) BASIC5.18□□□□□ -1.58
H2afb3S4R1G7 Gm18268-201ENSMUST00000208445 943 ntBASIC5.18□□□□□ -1.58
H2afb3S4R1G7 Gm45405-201ENSMUST00000211544 609 ntBASIC5.18□□□□□ -1.58
H2afb3S4R1G7 Gm45724-201ENSMUST00000213031 420 ntBASIC5.18□□□□□ -1.58
H2afb3S4R1G7 AC167250.1-202ENSMUST00000213629 672 ntTSL 3 BASIC5.18□□□□□ -1.58
H2afb3S4R1G7 Gm30313-201ENSMUST00000216806 597 ntTSL 3 BASIC5.18□□□□□ -1.58
H2afb3S4R1G7 Gm10037-203ENSMUST00000221620 636 ntAPPRIS P5 TSL 3 BASIC5.18□□□□□ -1.58
H2afb3S4R1G7 CU062626.1-201ENSMUST00000225248 505 ntBASIC5.18□□□□□ -1.58
H2afb3S4R1G7 AC107663.3-201ENSMUST00000225873 601 ntBASIC5.18□□□□□ -1.58
H2afb3S4R1G7 Vmn1r36-202ENSMUST00000226635 918 ntAPPRIS P2 BASIC5.18□□□□□ -1.58
H2afb3S4R1G7 AC154738.4-201ENSMUST00000228310 414 ntBASIC5.18□□□□□ -1.58
H2afb3S4R1G7 Prss23os-201ENSMUST00000032858 334 ntTSL 2 BASIC5.18□□□□□ -1.58
H2afb3S4R1G7 Olfr815-201ENSMUST00000071557 951 ntBASIC5.18□□□□□ -1.58
H2afb3S4R1G7 Plac1-201ENSMUST00000074861 1041 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
H2afb3S4R1G7 Olfr814-201ENSMUST00000081367 933 ntAPPRIS P1 BASIC5.18□□□□□ -1.58
H2afb3S4R1G7 Gm24200-201ENSMUST00000082955 157 ntBASIC5.18□□□□□ -1.58
H2afb3S4R1G7 Olfr1436-201ENSMUST00000087812 948 ntAPPRIS P1 BASIC5.18□□□□□ -1.58
H2afb3S4R1G7 2700062C07Rik-201ENSMUST00000097646 1040 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
H2afb3S4R1G7 Gm14296-201ENSMUST00000099007 3823 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
H2afb3S4R1G7 2210418O10Rik-201ENSMUST00000099009 3823 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
H2afb3S4R1G7 Hspa9-ps1-201ENSMUST00000119602 1933 ntBASIC5.18□□□□□ -1.58
H2afb3S4R1G7 Vmn2r33-201ENSMUST00000165921 2586 ntAPPRIS P1 TSL 5 BASIC5.18□□□□□ -1.58
H2afb3S4R1G7 Tor1aip2-203ENSMUST00000097526 2589 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
H2afb3S4R1G7 Gm3159-202ENSMUST00000167245 1797 ntAPPRIS P5 TSL 5 BASIC5.18□□□□□ -1.58
H2afb3S4R1G7 Vmn2r121-201ENSMUST00000094491 3062 ntAPPRIS P1 TSL 5 BASIC5.18□□□□□ -1.58
H2afb3S4R1G7 Gm37356-201ENSMUST00000193362 1613 ntBASIC5.18□□□□□ -1.58
H2afb3S4R1G7 Ubtfl1-203ENSMUST00000169398 4430 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
H2afb3S4R1G7 Gm26535-201ENSMUST00000181602 2600 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
H2afb3S4R1G7 Cnot1-202ENSMUST00000098473 8390 ntAPPRIS P1 TSL 5 BASIC5.18□□□□□ -1.58
H2afb3S4R1G7 Gm8853-201ENSMUST00000198366 1344 ntBASIC5.18□□□□□ -1.58
H2afb3S4R1G7 Gm43845-201ENSMUST00000202462 1820 ntBASIC5.18□□□□□ -1.58
H2afb3S4R1G7 Dnah8-201ENSMUST00000170651 14583 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
H2afb3S4R1G7 Zfp287-206ENSMUST00000185656 3370 ntAPPRIS P2 TSL 1 (best) BASIC5.18□□□□□ -1.58
H2afb3S4R1G7 Mocs2-213ENSMUST00000184245 4559 ntTSL 5 BASIC5.18□□□□□ -1.58
H2afb3S4R1G7 Gabrg2-202ENSMUST00000070735 2234 ntAPPRIS P4 TSL 1 (best) BASIC5.17□□□□□ -1.58
H2afb3S4R1G7 Rbm46-202ENSMUST00000182637 2058 ntTSL 5 BASIC5.17□□□□□ -1.58
H2afb3S4R1G7 Gm38029-201ENSMUST00000192669 2090 ntBASIC5.17□□□□□ -1.58
H2afb3S4R1G7 Gm37776-201ENSMUST00000193471 2497 ntBASIC5.17□□□□□ -1.58
H2afb3S4R1G7 Gm43164-201ENSMUST00000202529 2128 ntBASIC5.17□□□□□ -1.58
H2afb3S4R1G7 1700022I11Rik-201ENSMUST00000030163 3727 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
H2afb3S4R1G7 C4bp-201ENSMUST00000027657 3045 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
H2afb3S4R1G7 Olfr1226-203ENSMUST00000215562 2669 ntAPPRIS P1 TSL 5 BASIC5.17□□□□□ -1.58
H2afb3S4R1G7 Gm37124-201ENSMUST00000192140 1992 ntBASIC5.17□□□□□ -1.58
H2afb3S4R1G7 Gm43361-201ENSMUST00000196562 4690 ntBASIC5.17□□□□□ -1.58
H2afb3S4R1G7 Gm26691-202ENSMUST00000181952 4183 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
H2afb3S4R1G7 Sult2a4-201ENSMUST00000108520 984 ntAPPRIS ALT2 TSL 5 BASIC5.17□□□□□ -1.58
H2afb3S4R1G7 Gm13768-201ENSMUST00000116469 929 ntBASIC5.17□□□□□ -1.58
H2afb3S4R1G7 Rps11-ps5-201ENSMUST00000117302 472 ntBASIC5.17□□□□□ -1.58
H2afb3S4R1G7 Gm12697-201ENSMUST00000118008 667 ntBASIC5.17□□□□□ -1.58
H2afb3S4R1G7 Gm15332-201ENSMUST00000118386 357 ntBASIC5.17□□□□□ -1.58
H2afb3S4R1G7 Rps12-ps16-201ENSMUST00000118529 399 ntBASIC5.17□□□□□ -1.58
H2afb3S4R1G7 Gm12090-201ENSMUST00000118692 758 ntBASIC5.17□□□□□ -1.58
H2afb3S4R1G7 Gm15400-201ENSMUST00000118944 601 ntBASIC5.17□□□□□ -1.58
H2afb3S4R1G7 Gm14989-201ENSMUST00000120497 207 ntBASIC5.17□□□□□ -1.58
H2afb3S4R1G7 Olfr1003-ps1-201ENSMUST00000122238 717 ntBASIC5.17□□□□□ -1.58
H2afb3S4R1G7 Gm13669-201ENSMUST00000122366 457 ntBASIC5.17□□□□□ -1.58
H2afb3S4R1G7 Gm15878-201ENSMUST00000127561 306 ntBASIC5.17□□□□□ -1.58
H2afb3S4R1G7 Mpc1-203ENSMUST00000130559 603 ntTSL 2 BASIC5.17□□□□□ -1.58
Retrieved 100 of 76,532 protein–RNA pairs in 55 ms