Protein–RNA interactions for Protein: Q9ERG0

Lima1, LIM domain and actin-binding protein 1, mousemouse

Known RBP Predictions only

Length 753 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lima1Q9ERG0 Olfr720-203ENSMUST00000216079 4692 ntAPPRIS P1 TSL 5 BASIC5.14□□□□□ -1.59
Lima1Q9ERG0 Dsc1-202ENSMUST00000224432 4085 ntAPPRIS ALT2 BASIC5.14□□□□□ -1.59
Lima1Q9ERG0 Pi15-201ENSMUST00000088476 6923 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
Lima1Q9ERG0 Nlrp4a-204ENSMUST00000146907 3479 ntAPPRIS ALT2 TSL 1 (best) BASIC5.14□□□□□ -1.59
Lima1Q9ERG0 Usp25-201ENSMUST00000023580 4412 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
Lima1Q9ERG0 Gm15078-201ENSMUST00000118371 782 ntBASIC5.14□□□□□ -1.59
Lima1Q9ERG0 Olfr587-ps1-201ENSMUST00000118378 948 ntAPPRIS P1 BASIC5.14□□□□□ -1.59
Lima1Q9ERG0 Gm13924-201ENSMUST00000119899 486 ntBASIC5.14□□□□□ -1.59
Lima1Q9ERG0 Gm13484-201ENSMUST00000120738 412 ntBASIC5.14□□□□□ -1.59
Lima1Q9ERG0 Olfr1069-ps1-201ENSMUST00000120755 965 ntBASIC5.14□□□□□ -1.59
Lima1Q9ERG0 Gm5383-201ENSMUST00000121177 617 ntBASIC5.14□□□□□ -1.59
Lima1Q9ERG0 n-R5s21-201ENSMUST00000122692 117 ntBASIC5.14□□□□□ -1.59
Lima1Q9ERG0 Gm16208-201ENSMUST00000128476 471 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
Lima1Q9ERG0 Zfp783-203ENSMUST00000130463 537 ntTSL 2 BASIC5.14□□□□□ -1.59
Lima1Q9ERG0 Gm15848-203ENSMUST00000136015 482 ntTSL 5 BASIC5.14□□□□□ -1.59
Lima1Q9ERG0 Crem-224ENSMUST00000147138 436 ntTSL 5 BASIC5.14□□□□□ -1.59
Lima1Q9ERG0 Gm25348-201ENSMUST00000158961 111 ntBASIC5.14□□□□□ -1.59
Lima1Q9ERG0 Gm7152-201ENSMUST00000163570 605 ntBASIC5.14□□□□□ -1.59
Lima1Q9ERG0 Gm6047-201ENSMUST00000167221 574 ntBASIC5.14□□□□□ -1.59
Lima1Q9ERG0 Vdac2-208ENSMUST00000172727 1291 ntAPPRIS ALT2 TSL 5 BASIC5.14□□□□□ -1.59
Lima1Q9ERG0 Mir3095-201ENSMUST00000175552 87 ntBASIC5.14□□□□□ -1.59
Lima1Q9ERG0 Gm6717-201ENSMUST00000185549 838 ntBASIC5.14□□□□□ -1.59
Lima1Q9ERG0 Gm8241-201ENSMUST00000189286 816 ntBASIC5.14□□□□□ -1.59
Lima1Q9ERG0 1700047L14Rik-201ENSMUST00000189659 511 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
Lima1Q9ERG0 Gm37184-201ENSMUST00000194720 650 ntTSL 3 BASIC5.14□□□□□ -1.59
Lima1Q9ERG0 Mirlet7e-201ENSMUST00000196737 93 ntBASIC5.14□□□□□ -1.59
Lima1Q9ERG0 Pomp-203ENSMUST00000201376 383 ntTSL 3 BASIC5.14□□□□□ -1.59
Lima1Q9ERG0 Glud-ps-201ENSMUST00000206310 657 ntBASIC5.14□□□□□ -1.59
Lima1Q9ERG0 Gm3257-201ENSMUST00000207217 675 ntBASIC5.14□□□□□ -1.59
Lima1Q9ERG0 AC140409.4-201ENSMUST00000215757 538 ntBASIC5.14□□□□□ -1.59
Lima1Q9ERG0 AC160413.1-201ENSMUST00000217909 932 ntTSL 5 BASIC5.14□□□□□ -1.59
Lima1Q9ERG0 Gm3942-201ENSMUST00000218495 666 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
Lima1Q9ERG0 Clec2d-201ENSMUST00000032260 1213 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
Lima1Q9ERG0 Glt6d1-201ENSMUST00000038010 1211 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
Lima1Q9ERG0 Gm25134-201ENSMUST00000082646 160 ntBASIC5.14□□□□□ -1.59
Lima1Q9ERG0 Olfr1348-201ENSMUST00000086319 957 ntTSL 5 BASIC5.14□□□□□ -1.59
Lima1Q9ERG0 Olfr1057-202ENSMUST00000217435 3249 ntAPPRIS P1 TSL 5 BASIC5.14□□□□□ -1.59
Lima1Q9ERG0 Skint5-204ENSMUST00000171627 1611 ntTSL 5 BASIC5.14□□□□□ -1.59
Lima1Q9ERG0 Gm37558-201ENSMUST00000193684 2983 ntBASIC5.14□□□□□ -1.59
Lima1Q9ERG0 D7Ertd443e-202ENSMUST00000106129 1306 ntAPPRIS ALT2 TSL 1 (best) BASIC5.14□□□□□ -1.59
Lima1Q9ERG0 Gm12051-201ENSMUST00000147771 1341 ntTSL 5 BASIC5.14□□□□□ -1.59
Lima1Q9ERG0 Pramel3-202ENSMUST00000118821 3698 ntAPPRIS ALT2 TSL 1 (best) BASIC5.14□□□□□ -1.59
Lima1Q9ERG0 Olfr1348-207ENSMUST00000209029 2696 ntAPPRIS P1 TSL 5 BASIC5.14□□□□□ -1.59
Lima1Q9ERG0 Gm10558-201ENSMUST00000147494 1661 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
Lima1Q9ERG0 Rsrc2-210ENSMUST00000182489 1665 ntTSL 5 BASIC5.14□□□□□ -1.59
Lima1Q9ERG0 Dlg1-204ENSMUST00000115196 3418 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
Lima1Q9ERG0 Usp46-201ENSMUST00000068058 4557 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
Lima1Q9ERG0 St18-210ENSMUST00000150761 4264 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
Lima1Q9ERG0 Gm7970-201ENSMUST00000167615 1403 ntAPPRIS P1 TSL 5 BASIC5.14□□□□□ -1.59
Lima1Q9ERG0 Gm7980-201ENSMUST00000168107 1403 ntAPPRIS P1 TSL 5 BASIC5.14□□□□□ -1.59
Lima1Q9ERG0 Piga-201ENSMUST00000033754 3594 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
Lima1Q9ERG0 Mcmdc2-205ENSMUST00000171802 2553 ntAPPRIS P1 TSL 5 BASIC5.13□□□□□ -1.59
Lima1Q9ERG0 Serpina1f-203ENSMUST00000118101 1453 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
Lima1Q9ERG0 Slco1b2-201ENSMUST00000042812 3307 ntAPPRIS P2 TSL 1 (best) BASIC5.13□□□□□ -1.59
Lima1Q9ERG0 Iqch-204ENSMUST00000163982 3375 ntAPPRIS P3 TSL 1 (best) BASIC5.13□□□□□ -1.59
Lima1Q9ERG0 Vmn1r34-204ENSMUST00000226999 3048 ntAPPRIS P1 BASIC5.13□□□□□ -1.59
Lima1Q9ERG0 Gm14296-201ENSMUST00000099007 3823 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
Lima1Q9ERG0 2210418O10Rik-201ENSMUST00000099009 3823 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
Lima1Q9ERG0 Gm18186-201ENSMUST00000192239 1580 ntBASIC5.13□□□□□ -1.59
Lima1Q9ERG0 Vmn1r57-202ENSMUST00000227798 2409 ntAPPRIS P1 BASIC5.13□□□□□ -1.59
Lima1Q9ERG0 Clec4a2-202ENSMUST00000041779 2481 ntAPPRIS P3 TSL 1 (best) BASIC5.13□□□□□ -1.59
Lima1Q9ERG0 CT025710.1-201ENSMUST00000222949 2533 ntBASIC5.13□□□□□ -1.59
Lima1Q9ERG0 Traj7-201ENSMUST00000103733 59 ntAPPRIS P1 BASIC5.13□□□□□ -1.59
Lima1Q9ERG0 Rps15a-201ENSMUST00000106588 640 ntAPPRIS P1 TSL 3 BASIC5.13□□□□□ -1.59
Lima1Q9ERG0 Gm12683-201ENSMUST00000117528 415 ntBASIC5.13□□□□□ -1.59
Lima1Q9ERG0 Gm7312-201ENSMUST00000118798 469 ntBASIC5.13□□□□□ -1.59
Lima1Q9ERG0 Gm12303-201ENSMUST00000119506 673 ntBASIC5.13□□□□□ -1.59
Lima1Q9ERG0 Gm13259-201ENSMUST00000120792 456 ntBASIC5.13□□□□□ -1.59
Lima1Q9ERG0 Gm25152-201ENSMUST00000157117 114 ntBASIC5.13□□□□□ -1.59
Lima1Q9ERG0 Gm15812-201ENSMUST00000162331 748 ntBASIC5.13□□□□□ -1.59
Lima1Q9ERG0 Olfr102-201ENSMUST00000169373 1027 ntAPPRIS P1 BASIC5.13□□□□□ -1.59
Lima1Q9ERG0 Gm22411-201ENSMUST00000175462 126 ntBASIC5.13□□□□□ -1.59
Lima1Q9ERG0 Gm22002-201ENSMUST00000175622 125 ntBASIC5.13□□□□□ -1.59
Lima1Q9ERG0 Gm28188-201ENSMUST00000190483 236 ntBASIC5.13□□□□□ -1.59
Lima1Q9ERG0 2610012C04Rik-201ENSMUST00000193434 1023 ntBASIC5.13□□□□□ -1.59
Lima1Q9ERG0 Gm37173-201ENSMUST00000194498 1017 ntBASIC5.13□□□□□ -1.59
Lima1Q9ERG0 Gatad1-204ENSMUST00000196304 704 ntTSL 3 BASIC5.13□□□□□ -1.59
Lima1Q9ERG0 Gm20239-201ENSMUST00000196610 982 ntBASIC5.13□□□□□ -1.59
Lima1Q9ERG0 Gm6260-202ENSMUST00000197170 921 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
Lima1Q9ERG0 1700001N15Rik-201ENSMUST00000199380 482 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
Lima1Q9ERG0 Gm42663-201ENSMUST00000199883 351 ntBASIC5.13□□□□□ -1.59
Lima1Q9ERG0 Gm43164-201ENSMUST00000202529 2128 ntBASIC5.13□□□□□ -1.59
Lima1Q9ERG0 Gm45249-201ENSMUST00000211021 348 ntBASIC5.13□□□□□ -1.59
Lima1Q9ERG0 Gm45750-201ENSMUST00000211966 354 ntBASIC5.13□□□□□ -1.59
Lima1Q9ERG0 AC132121.1-201ENSMUST00000220774 332 ntBASIC5.13□□□□□ -1.59
Lima1Q9ERG0 CT010486.1-201ENSMUST00000224609 422 ntBASIC5.13□□□□□ -1.59
Lima1Q9ERG0 Olfr739-201ENSMUST00000075261 930 ntAPPRIS P1 BASIC5.13□□□□□ -1.59
Lima1Q9ERG0 Olfr777-201ENSMUST00000080313 936 ntAPPRIS P1 BASIC5.13□□□□□ -1.59
Lima1Q9ERG0 Olfr263-201ENSMUST00000096006 1087 ntAPPRIS P1 BASIC5.13□□□□□ -1.59
Lima1Q9ERG0 Defa31-201ENSMUST00000098896 377 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
Lima1Q9ERG0 Zfp995-201ENSMUST00000106026 1744 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
Lima1Q9ERG0 R3hdm1-201ENSMUST00000036288 4795 ntAPPRIS P2 TSL 5 BASIC5.13□□□□□ -1.59
Lima1Q9ERG0 Nlrp1b-202ENSMUST00000108514 3541 ntAPPRIS ALT2 TSL 5 BASIC5.13□□□□□ -1.59
Lima1Q9ERG0 AC115970.1-201ENSMUST00000218910 1758 ntBASIC5.13□□□□□ -1.59
Lima1Q9ERG0 Gm5796-201ENSMUST00000096184 1817 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
Lima1Q9ERG0 Gm16513-201ENSMUST00000101023 2832 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
Lima1Q9ERG0 Gm11867-201ENSMUST00000133363 1909 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
Lima1Q9ERG0 Gm5444-201ENSMUST00000065956 2468 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
Lima1Q9ERG0 Gm15262-202ENSMUST00000207320 5010 ntAPPRIS P1 TSL 5 BASIC5.13□□□□□ -1.59
Lima1Q9ERG0 Gm13575-201ENSMUST00000142353 1520 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
Retrieved 100 of 76,532 protein–RNA pairs in 81.5 ms