Protein–RNA interactions for Protein: Q9DCB1

Hmgn3, High mobility group nucleosome-binding domain-containing protein 3, mousemouse

Predictions only

Length 99 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmgn3Q9DCB1 Gm14237-201ENSMUST00000122080 430 ntBASIC4.81□□□□□ -1.64
Hmgn3Q9DCB1 Mir1900-201ENSMUST00000122714 78 ntBASIC4.81□□□□□ -1.64
Hmgn3Q9DCB1 Cd200r3-210ENSMUST00000171779 1223 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
Hmgn3Q9DCB1 Gm16531-201ENSMUST00000180658 967 ntBASIC4.81□□□□□ -1.64
Hmgn3Q9DCB1 Gm27679-201ENSMUST00000184612 84 ntBASIC4.81□□□□□ -1.64
Hmgn3Q9DCB1 1700023F02Rik-202ENSMUST00000188279 412 ntTSL 2 BASIC4.81□□□□□ -1.64
Hmgn3Q9DCB1 Gm37065-201ENSMUST00000191636 444 ntTSL 2 BASIC4.81□□□□□ -1.64
Hmgn3Q9DCB1 Gm37682-201ENSMUST00000191776 522 ntBASIC4.81□□□□□ -1.64
Hmgn3Q9DCB1 Gm19002-201ENSMUST00000192649 1012 ntBASIC4.81□□□□□ -1.64
Hmgn3Q9DCB1 Gm42720-201ENSMUST00000196813 300 ntBASIC4.81□□□□□ -1.64
Hmgn3Q9DCB1 Gm31026-201ENSMUST00000198762 821 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
Hmgn3Q9DCB1 Gm43055-201ENSMUST00000198859 879 ntTSL 3 BASIC4.81□□□□□ -1.64
Hmgn3Q9DCB1 Tmem243-203ENSMUST00000198935 849 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
Hmgn3Q9DCB1 Gm43794-201ENSMUST00000200971 692 ntBASIC4.81□□□□□ -1.64
Hmgn3Q9DCB1 Rpl7a-ps14-201ENSMUST00000205097 790 ntBASIC4.81□□□□□ -1.64
Hmgn3Q9DCB1 AC153537.1-201ENSMUST00000215530 858 ntTSL 5 BASIC4.81□□□□□ -1.64
Hmgn3Q9DCB1 Gm18541-201ENSMUST00000215935 538 ntBASIC4.81□□□□□ -1.64
Hmgn3Q9DCB1 Gm6171-201ENSMUST00000220760 645 ntBASIC4.81□□□□□ -1.64
Hmgn3Q9DCB1 AC154636.1-201ENSMUST00000223226 126 ntBASIC4.81□□□□□ -1.64
Hmgn3Q9DCB1 Cd200r3-201ENSMUST00000048479 986 ntAPPRIS ALT2 TSL 1 (best) BASIC4.81□□□□□ -1.64
Hmgn3Q9DCB1 Defb42-201ENSMUST00000067990 618 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
Hmgn3Q9DCB1 Prr9-201ENSMUST00000070284 1183 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
Hmgn3Q9DCB1 Cd200r3-202ENSMUST00000077178 767 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
Hmgn3Q9DCB1 Olfr206-201ENSMUST00000084791 1005 ntAPPRIS P1 BASIC4.81□□□□□ -1.64
Hmgn3Q9DCB1 Olfr843-203ENSMUST00000214267 7071 ntAPPRIS P1 TSL 5 BASIC4.81□□□□□ -1.64
Hmgn3Q9DCB1 Gm15737-201ENSMUST00000113434 4894 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
Hmgn3Q9DCB1 Dlg1-204ENSMUST00000115196 3418 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
Hmgn3Q9DCB1 Gm45222-201ENSMUST00000207029 4307 ntBASIC4.81□□□□□ -1.64
Hmgn3Q9DCB1 Slc22a26-202ENSMUST00000120522 2854 ntAPPRIS ALT2 TSL 1 (best) BASIC4.81□□□□□ -1.64
Hmgn3Q9DCB1 Olfr884-202ENSMUST00000181088 3185 ntAPPRIS P1 TSL 2 BASIC4.81□□□□□ -1.64
Hmgn3Q9DCB1 Gm13089-201ENSMUST00000073532 1807 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
Hmgn3Q9DCB1 Mid2-203ENSMUST00000112993 5916 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
Hmgn3Q9DCB1 Olfr495-201ENSMUST00000210990 1440 ntAPPRIS P1 BASIC4.8□□□□□ -1.64
Hmgn3Q9DCB1 Rgs17-202ENSMUST00000064225 8191 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
Hmgn3Q9DCB1 Chrnb3-203ENSMUST00000211104 3241 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
Hmgn3Q9DCB1 Pde1a-204ENSMUST00000102653 2439 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
Hmgn3Q9DCB1 Gm13428-201ENSMUST00000117540 365 ntBASIC4.8□□□□□ -1.64
Hmgn3Q9DCB1 Gm13772-201ENSMUST00000118431 317 ntBASIC4.8□□□□□ -1.64
Hmgn3Q9DCB1 Gm14233-201ENSMUST00000149576 439 ntTSL 3 BASIC4.8□□□□□ -1.64
Hmgn3Q9DCB1 Gm26489-201ENSMUST00000157880 264 ntBASIC4.8□□□□□ -1.64
Hmgn3Q9DCB1 Gm6619-201ENSMUST00000159229 608 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
Hmgn3Q9DCB1 Gm18343-201ENSMUST00000172802 604 ntBASIC4.8□□□□□ -1.64
Hmgn3Q9DCB1 Gm22852-201ENSMUST00000177899 101 ntBASIC4.8□□□□□ -1.64
Hmgn3Q9DCB1 Ssxb8-202ENSMUST00000185125 559 ntAPPRIS P1 TSL 5 BASIC4.8□□□□□ -1.64
Hmgn3Q9DCB1 1810053B23Rik-201ENSMUST00000185242 634 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
Hmgn3Q9DCB1 Gm17953-201ENSMUST00000192061 667 ntBASIC4.8□□□□□ -1.64
Hmgn3Q9DCB1 Mir409-201ENSMUST00000198153 79 ntBASIC4.8□□□□□ -1.64
Hmgn3Q9DCB1 Gm43033-201ENSMUST00000199682 425 ntBASIC4.8□□□□□ -1.64
Hmgn3Q9DCB1 Gm44038-201ENSMUST00000203952 889 ntBASIC4.8□□□□□ -1.64
Hmgn3Q9DCB1 Snhg1-207ENSMUST00000205909 709 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
Hmgn3Q9DCB1 Gm31749-201ENSMUST00000206873 598 ntTSL 3 BASIC4.8□□□□□ -1.64
Hmgn3Q9DCB1 Ankrd42-207ENSMUST00000207131 1220 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
Hmgn3Q9DCB1 Gm33242-201ENSMUST00000212130 1057 ntBASIC4.8□□□□□ -1.64
Hmgn3Q9DCB1 Gm18997-201ENSMUST00000216353 822 ntBASIC4.8□□□□□ -1.64
Hmgn3Q9DCB1 AC156832.1-201ENSMUST00000217609 811 ntTSL 5 BASIC4.8□□□□□ -1.64
Hmgn3Q9DCB1 Gm4803-201ENSMUST00000218729 1279 ntBASIC4.8□□□□□ -1.64
Hmgn3Q9DCB1 AC132344.1-201ENSMUST00000221289 376 ntTSL 3 BASIC4.8□□□□□ -1.64
Hmgn3Q9DCB1 AC117797.1-201ENSMUST00000223977 695 ntBASIC4.8□□□□□ -1.64
Hmgn3Q9DCB1 Vmn1r41-205ENSMUST00000227630 827 ntBASIC4.8□□□□□ -1.64
Hmgn3Q9DCB1 AC127371.1-201ENSMUST00000228516 312 ntBASIC4.8□□□□□ -1.64
Hmgn3Q9DCB1 Ceacam12-201ENSMUST00000032520 1056 ntAPPRIS P3 TSL 1 (best) BASIC4.8□□□□□ -1.64
Hmgn3Q9DCB1 Gm5142-201ENSMUST00000066558 626 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
Hmgn3Q9DCB1 Tas2r120-201ENSMUST00000071707 892 ntAPPRIS P1 BASIC4.8□□□□□ -1.64
Hmgn3Q9DCB1 5430401F13Rik-201ENSMUST00000075020 602 ntAPPRIS P1 TSL 5 BASIC4.8□□□□□ -1.64
Hmgn3Q9DCB1 Gm22684-201ENSMUST00000082849 132 ntBASIC4.8□□□□□ -1.64
Hmgn3Q9DCB1 Mir375-201ENSMUST00000083682 64 ntBASIC4.8□□□□□ -1.64
Hmgn3Q9DCB1 Kncn-201ENSMUST00000097918 951 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
Hmgn3Q9DCB1 Olfr1480-202ENSMUST00000207093 1819 ntAPPRIS P1 TSL 5 BASIC4.8□□□□□ -1.64
Hmgn3Q9DCB1 A330076H08Rik-202ENSMUST00000207694 1836 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
Hmgn3Q9DCB1 Olfr1480-204ENSMUST00000207987 1804 ntTSL 3 BASIC4.8□□□□□ -1.64
Hmgn3Q9DCB1 Olfr1252-203ENSMUST00000216203 3243 ntAPPRIS P1 TSL 3 BASIC4.8□□□□□ -1.64
Hmgn3Q9DCB1 Lipn-201ENSMUST00000025682 1502 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
Hmgn3Q9DCB1 Adam25-201ENSMUST00000096663 2621 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
Hmgn3Q9DCB1 4933400C23Rik-201ENSMUST00000188610 1708 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
Hmgn3Q9DCB1 Btbd35f7-201ENSMUST00000105007 1960 ntAPPRIS P1 BASIC4.8□□□□□ -1.64
Hmgn3Q9DCB1 Olfr1297-202ENSMUST00000213398 6998 ntAPPRIS P1 TSL 2 BASIC4.8□□□□□ -1.64
Hmgn3Q9DCB1 Cdh12-201ENSMUST00000075132 5636 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
Hmgn3Q9DCB1 Vmn1r213-202ENSMUST00000227573 3515 ntAPPRIS ALT2 BASIC4.8□□□□□ -1.64
Hmgn3Q9DCB1 Gm44250-201ENSMUST00000203092 4229 ntBASIC4.8□□□□□ -1.64
Hmgn3Q9DCB1 Zzz3-204ENSMUST00000106103 2674 ntAPPRIS ALT2 TSL 1 (best) BASIC4.79□□□□□ -1.64
Hmgn3Q9DCB1 Gm4954-201ENSMUST00000135069 1601 ntBASIC4.79□□□□□ -1.64
Hmgn3Q9DCB1 Agtr1b-202ENSMUST00000163776 1633 ntAPPRIS P1 TSL 5 BASIC4.79□□□□□ -1.64
Hmgn3Q9DCB1 Cyp4a31-201ENSMUST00000030480 2396 ntTSL 2 BASIC4.79□□□□□ -1.64
Hmgn3Q9DCB1 Vmn2r17-201ENSMUST00000171841 2550 ntAPPRIS P1 TSL 5 BASIC4.79□□□□□ -1.64
Hmgn3Q9DCB1 Gm44255-201ENSMUST00000203456 2053 ntBASIC4.79□□□□□ -1.64
Hmgn3Q9DCB1 Fnbp1l-203ENSMUST00000162947 1830 ntAPPRIS P1 TSL 5 BASIC4.79□□□□□ -1.64
Hmgn3Q9DCB1 Gm4541-201ENSMUST00000208901 1848 ntBASIC4.79□□□□□ -1.64
Hmgn3Q9DCB1 Gcc2-208ENSMUST00000162860 6400 ntAPPRIS ALT2 TSL 5 BASIC4.79□□□□□ -1.64
Hmgn3Q9DCB1 Gm7205-201ENSMUST00000196032 1323 ntBASIC4.79□□□□□ -1.64
Hmgn3Q9DCB1 Gm43062-201ENSMUST00000196302 1319 ntBASIC4.79□□□□□ -1.64
Hmgn3Q9DCB1 Gm4973-201ENSMUST00000206925 1334 ntBASIC4.79□□□□□ -1.64
Hmgn3Q9DCB1 Pfkfb2-202ENSMUST00000066863 4425 ntAPPRIS P3 TSL 1 (best) BASIC4.79□□□□□ -1.64
Hmgn3Q9DCB1 Huwe1-202ENSMUST00000112622 14168 ntAPPRIS ALT2 TSL 1 (best) BASIC4.79□□□□□ -1.64
Hmgn3Q9DCB1 Btbd35f28-201ENSMUST00000105015 1960 ntAPPRIS P1 BASIC4.79□□□□□ -1.64
Hmgn3Q9DCB1 Btbd35f18-201ENSMUST00000105019 1960 ntAPPRIS P1 BASIC4.79□□□□□ -1.64
Hmgn3Q9DCB1 Btbd35f11-201ENSMUST00000105020 1960 ntAPPRIS P1 BASIC4.79□□□□□ -1.64
Hmgn3Q9DCB1 Btbd35f19-201ENSMUST00000178444 1960 ntAPPRIS P1 BASIC4.79□□□□□ -1.64
Hmgn3Q9DCB1 Btbd35f20-201ENSMUST00000179325 1960 ntAPPRIS P1 BASIC4.79□□□□□ -1.64
Hmgn3Q9DCB1 Ear1-201ENSMUST00000100691 713 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
Hmgn3Q9DCB1 Gm13491-201ENSMUST00000118267 235 ntBASIC4.79□□□□□ -1.64
Retrieved 100 of 76,532 protein–RNA pairs in 82.1 ms