Protein–RNA interactions for Protein: Q9D0R4

Ddx56, Probable ATP-dependent RNA helicase DDX56, mousemouse

Known RBP Predictions only

Length 546 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx56Q9D0R4 AC099612.2-201ENSMUST00000226824 721 ntBASIC6.24□□□□□ -1.41
Ddx56Q9D0R4 B020031M17Rik-201ENSMUST00000080505 522 ntAPPRIS P1 BASIC6.24□□□□□ -1.41
Ddx56Q9D0R4 Gm24454-201ENSMUST00000083349 132 ntBASIC6.24□□□□□ -1.41
Ddx56Q9D0R4 Olfr556-201ENSMUST00000098219 1023 ntAPPRIS P1 BASIC6.24□□□□□ -1.41
Ddx56Q9D0R4 Olfr448-203ENSMUST00000214529 2764 ntAPPRIS P1 TSL 5 BASIC6.24□□□□□ -1.41
Ddx56Q9D0R4 Gm18757-201ENSMUST00000207938 3141 ntBASIC6.24□□□□□ -1.41
Ddx56Q9D0R4 Naip3-201ENSMUST00000118082 4208 ntBASIC6.24□□□□□ -1.41
Ddx56Q9D0R4 Zfp62-202ENSMUST00000109197 4029 ntAPPRIS P1 TSL 1 (best) BASIC6.24□□□□□ -1.41
Ddx56Q9D0R4 Gm28928-201ENSMUST00000187286 1443 ntTSL 1 (best) BASIC6.24□□□□□ -1.41
Ddx56Q9D0R4 Olfr532-203ENSMUST00000213801 4232 ntAPPRIS P1 TSL 5 BASIC6.23□□□□□ -1.41
Ddx56Q9D0R4 Fat1-205ENSMUST00000191428 14814 ntAPPRIS P1 TSL 5 BASIC6.23□□□□□ -1.41
Ddx56Q9D0R4 Stxbp5-201ENSMUST00000038213 8825 ntAPPRIS ALT1 TSL 5 BASIC6.23□□□□□ -1.41
Ddx56Q9D0R4 Zfp426-203ENSMUST00000163348 2135 ntAPPRIS ALT2 TSL 1 (best) BASIC6.23□□□□□ -1.41
Ddx56Q9D0R4 Il1rl2-204ENSMUST00000194296 3908 ntAPPRIS P1 TSL 1 (best) BASIC6.23□□□□□ -1.41
Ddx56Q9D0R4 Gabrp-201ENSMUST00000020366 3280 ntAPPRIS P1 TSL 1 (best) BASIC6.23□□□□□ -1.41
Ddx56Q9D0R4 AC120375.1-201ENSMUST00000227034 3612 ntBASIC6.23□□□□□ -1.41
Ddx56Q9D0R4 Dnah1-201ENSMUST00000048603 12872 ntAPPRIS P1 TSL 5 BASIC6.23□□□□□ -1.41
Ddx56Q9D0R4 Gm21761-202ENSMUST00000187530 1374 ntAPPRIS P1 TSL 1 (best) BASIC6.23□□□□□ -1.41
Ddx56Q9D0R4 Gm45426-201ENSMUST00000209393 3672 ntBASIC6.23□□□□□ -1.41
Ddx56Q9D0R4 Gm43891-201ENSMUST00000205132 3112 ntBASIC6.23□□□□□ -1.41
Ddx56Q9D0R4 Atad2-208ENSMUST00000228783 3472 ntAPPRIS ALT2 BASIC6.23□□□□□ -1.41
Ddx56Q9D0R4 Trbv4-201ENSMUST00000103265 393 ntAPPRIS P1 BASIC6.23□□□□□ -1.41
Ddx56Q9D0R4 Spata17-202ENSMUST00000110945 1045 ntAPPRIS ALT2 TSL 1 (best) BASIC6.23□□□□□ -1.41
Ddx56Q9D0R4 Gm15618-201ENSMUST00000121610 452 ntBASIC6.23□□□□□ -1.41
Ddx56Q9D0R4 Gm14970-201ENSMUST00000122289 355 ntBASIC6.23□□□□□ -1.41
Ddx56Q9D0R4 Gm15300-201ENSMUST00000122324 279 ntBASIC6.23□□□□□ -1.41
Ddx56Q9D0R4 Gm7846-201ENSMUST00000145844 274 ntBASIC6.23□□□□□ -1.41
Ddx56Q9D0R4 Gm26346-201ENSMUST00000157525 329 ntBASIC6.23□□□□□ -1.41
Ddx56Q9D0R4 Gm22186-201ENSMUST00000157822 122 ntBASIC6.23□□□□□ -1.41
Ddx56Q9D0R4 Mir1945-201ENSMUST00000157919 78 ntBASIC6.23□□□□□ -1.41
Ddx56Q9D0R4 Gm15056-202ENSMUST00000167686 314 ntAPPRIS P2 TSL 5 BASIC6.23□□□□□ -1.41
Ddx56Q9D0R4 Cep41-210ENSMUST00000169422 438 ntTSL 3 BASIC6.23□□□□□ -1.41
Ddx56Q9D0R4 Olfr772-201ENSMUST00000169800 1004 ntAPPRIS P1 BASIC6.23□□□□□ -1.41
Ddx56Q9D0R4 A730017C20Rik-206ENSMUST00000175830 731 ntAPPRIS ALT2 TSL 5 BASIC6.23□□□□□ -1.41
Ddx56Q9D0R4 Gm20620-201ENSMUST00000177528 168 ntBASIC6.23□□□□□ -1.41
Ddx56Q9D0R4 Gm21399-201ENSMUST00000180210 597 ntBASIC6.23□□□□□ -1.41
Ddx56Q9D0R4 D630011A20Rik-201ENSMUST00000180858 500 ntTSL 1 (best) BASIC6.23□□□□□ -1.41
Ddx56Q9D0R4 Rian-214ENSMUST00000183026 596 ntTSL 5 BASIC6.23□□□□□ -1.41
Ddx56Q9D0R4 Gm29519-201ENSMUST00000186994 398 ntBASIC6.23□□□□□ -1.41
Ddx56Q9D0R4 Gm28066-201ENSMUST00000188657 472 ntBASIC6.23□□□□□ -1.41
Ddx56Q9D0R4 Gm28926-201ENSMUST00000191063 680 ntBASIC6.23□□□□□ -1.41
Ddx56Q9D0R4 Gm29433-201ENSMUST00000191241 253 ntTSL 5 BASIC6.23□□□□□ -1.41
Ddx56Q9D0R4 Gm37947-201ENSMUST00000192740 894 ntTSL 5 BASIC6.23□□□□□ -1.41
Ddx56Q9D0R4 Gm6321-201ENSMUST00000194460 1090 ntBASIC6.23□□□□□ -1.41
Ddx56Q9D0R4 4930562F17Rik-201ENSMUST00000195279 960 ntTSL 3 BASIC6.23□□□□□ -1.41
Ddx56Q9D0R4 Gm44494-201ENSMUST00000196760 129 ntBASIC6.23□□□□□ -1.41
Ddx56Q9D0R4 Gm43222-201ENSMUST00000199013 603 ntBASIC6.23□□□□□ -1.41
Ddx56Q9D0R4 Gm5990-201ENSMUST00000203126 746 ntBASIC6.23□□□□□ -1.41
Ddx56Q9D0R4 Gm19033-201ENSMUST00000208516 964 ntBASIC6.23□□□□□ -1.41
Ddx56Q9D0R4 Gm7128-201ENSMUST00000211639 533 ntBASIC6.23□□□□□ -1.41
Ddx56Q9D0R4 AC158630.1-201ENSMUST00000214387 993 ntTSL 5 BASIC6.23□□□□□ -1.41
Ddx56Q9D0R4 Gm46332-202ENSMUST00000220320 516 ntTSL 3 BASIC6.23□□□□□ -1.41
Ddx56Q9D0R4 Gm7550-201ENSMUST00000223334 282 ntTSL 5 BASIC6.23□□□□□ -1.41
Ddx56Q9D0R4 AC165092.4-201ENSMUST00000225025 679 ntBASIC6.23□□□□□ -1.41
Ddx56Q9D0R4 AL669819.1-201ENSMUST00000225143 330 ntBASIC6.23□□□□□ -1.41
Ddx56Q9D0R4 AC154755.1-201ENSMUST00000225244 537 ntBASIC6.23□□□□□ -1.41
Ddx56Q9D0R4 AC161252.1-201ENSMUST00000225536 467 ntBASIC6.23□□□□□ -1.41
Ddx56Q9D0R4 Psma4-201ENSMUST00000034848 1165 ntAPPRIS P1 TSL 1 (best) BASIC6.23□□□□□ -1.41
Ddx56Q9D0R4 Olfr802-201ENSMUST00000074713 939 ntAPPRIS P1 BASIC6.23□□□□□ -1.41
Ddx56Q9D0R4 Gm26064-201ENSMUST00000083381 109 ntBASIC6.23□□□□□ -1.41
Ddx56Q9D0R4 Boll-201ENSMUST00000087585 882 ntAPPRIS P2 TSL 1 (best) BASIC6.23□□□□□ -1.41
Ddx56Q9D0R4 Nms-201ENSMUST00000088029 1001 ntAPPRIS P1 TSL 1 (best) BASIC6.23□□□□□ -1.41
Ddx56Q9D0R4 Olfr1104-201ENSMUST00000099869 933 ntAPPRIS P1 BASIC6.23□□□□□ -1.41
Ddx56Q9D0R4 Gm2381-201ENSMUST00000174558 4073 ntAPPRIS P1 TSL 1 (best) BASIC6.23□□□□□ -1.41
Ddx56Q9D0R4 AC102847.2-201ENSMUST00000227799 2906 ntBASIC6.23□□□□□ -1.41
Ddx56Q9D0R4 Gm36099-201ENSMUST00000221946 1798 ntTSL 1 (best) BASIC6.23□□□□□ -1.41
Ddx56Q9D0R4 Zfp184-205ENSMUST00000176511 2703 ntAPPRIS P1 TSL 1 (best) BASIC6.23□□□□□ -1.41
Ddx56Q9D0R4 Gm15023-201ENSMUST00000113183 3698 ntAPPRIS P1 TSL 1 (best) BASIC6.23□□□□□ -1.41
Ddx56Q9D0R4 AV320801-201ENSMUST00000068340 3698 ntAPPRIS P1 TSL 1 (best) BASIC6.23□□□□□ -1.41
Ddx56Q9D0R4 Gm4070-201ENSMUST00000106766 8795 ntAPPRIS P1 TSL 1 (best) BASIC6.23□□□□□ -1.41
Ddx56Q9D0R4 Gvin1-201ENSMUST00000006667 8795 ntAPPRIS P1 TSL 1 (best) BASIC6.23□□□□□ -1.41
Ddx56Q9D0R4 Hormad1-203ENSMUST00000107154 1444 ntAPPRIS P3 TSL 1 (best) BASIC6.23□□□□□ -1.41
Ddx56Q9D0R4 Gm44739-201ENSMUST00000205294 1426 ntBASIC6.23□□□□□ -1.41
Ddx56Q9D0R4 Olfr1355-201ENSMUST00000078414 3317 ntAPPRIS P1 TSL 2 BASIC6.23□□□□□ -1.41
Ddx56Q9D0R4 Gm37407-201ENSMUST00000194793 1316 ntBASIC6.23□□□□□ -1.41
Ddx56Q9D0R4 AW551984-202ENSMUST00000119722 4224 ntAPPRIS P1 TSL 1 (best) BASIC6.23□□□□□ -1.41
Ddx56Q9D0R4 Slfn8-206ENSMUST00000215239 2930 ntTSL 5 BASIC6.22□□□□□ -1.41
Ddx56Q9D0R4 Gm13119-201ENSMUST00000094526 2094 ntAPPRIS P1 TSL 1 (best) BASIC6.22□□□□□ -1.41
Ddx56Q9D0R4 Olfr19-202ENSMUST00000206365 1967 ntAPPRIS P1 TSL 3 BASIC6.22□□□□□ -1.41
Ddx56Q9D0R4 Obox4-ps28-201ENSMUST00000175654 1362 ntBASIC6.22□□□□□ -1.41
Ddx56Q9D0R4 Gm37238-201ENSMUST00000195552 2390 ntBASIC6.22□□□□□ -1.41
Ddx56Q9D0R4 Il18r1-206ENSMUST00000195684 2850 ntAPPRIS P1 TSL 5 BASIC6.22□□□□□ -1.41
Ddx56Q9D0R4 Cntn3-202ENSMUST00000203619 5294 ntAPPRIS P1 TSL 1 (best) BASIC6.22□□□□□ -1.41
Ddx56Q9D0R4 Olfr693-202ENSMUST00000215541 4015 ntAPPRIS P1 TSL 5 BASIC6.22□□□□□ -1.41
Ddx56Q9D0R4 Gm10310-202ENSMUST00000213667 4661 ntAPPRIS P5 TSL 5 BASIC6.22□□□□□ -1.41
Ddx56Q9D0R4 Olfr1505-203ENSMUST00000216835 3685 ntAPPRIS P1 TSL 5 BASIC6.22□□□□□ -1.41
Ddx56Q9D0R4 Gm5751-201ENSMUST00000115561 444 ntAPPRIS P1 TSL 5 BASIC6.22□□□□□ -1.41
Ddx56Q9D0R4 Gm12077-201ENSMUST00000117049 364 ntBASIC6.22□□□□□ -1.41
Ddx56Q9D0R4 Gm14580-201ENSMUST00000119122 718 ntBASIC6.22□□□□□ -1.41
Ddx56Q9D0R4 Gm13578-201ENSMUST00000120849 590 ntBASIC6.22□□□□□ -1.41
Ddx56Q9D0R4 Defa-ps12-201ENSMUST00000122353 193 ntBASIC6.22□□□□□ -1.41
Ddx56Q9D0R4 Gm24767-201ENSMUST00000158509 95 ntBASIC6.22□□□□□ -1.41
Ddx56Q9D0R4 Gm16132-201ENSMUST00000159296 598 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
Ddx56Q9D0R4 Ptpn4-204ENSMUST00000163621 431 ntTSL 3 BASIC6.22□□□□□ -1.41
Ddx56Q9D0R4 Gm3594-201ENSMUST00000169152 997 ntAPPRIS ALT2 TSL 5 BASIC6.22□□□□□ -1.41
Ddx56Q9D0R4 Gm24103-201ENSMUST00000174930 77 ntBASIC6.22□□□□□ -1.41
Ddx56Q9D0R4 Sbp-205ENSMUST00000183017 700 ntTSL 5 BASIC6.22□□□□□ -1.41
Ddx56Q9D0R4 Eloc-206ENSMUST00000186948 641 ntAPPRIS P1 TSL 2 BASIC6.22□□□□□ -1.41
Ddx56Q9D0R4 Gm38201-201ENSMUST00000192143 387 ntBASIC6.22□□□□□ -1.41
Ddx56Q9D0R4 Gm7496-201ENSMUST00000192573 1034 ntBASIC6.22□□□□□ -1.41
Retrieved 100 of 76,532 protein–RNA pairs in 72.5 ms