Protein–RNA interactions for Protein: Q9CU62

Smc1a, Structural maintenance of chromosomes protein 1A, mousemouse

Known RBP Predictions only

Length 1,233 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smc1aQ9CU62 Gm24265-201ENSMUST00000101833 141 ntBASIC6.08□□□□□ -1.44
Smc1aQ9CU62 Gm22499-201ENSMUST00000104501 135 ntBASIC6.08□□□□□ -1.44
Smc1aQ9CU62 Gm3173-201ENSMUST00000112776 519 ntAPPRIS P5 TSL 5 BASIC6.08□□□□□ -1.44
Smc1aQ9CU62 Gm11561-201ENSMUST00000117429 417 ntBASIC6.08□□□□□ -1.44
Smc1aQ9CU62 Gm13866-201ENSMUST00000118901 968 ntBASIC6.08□□□□□ -1.44
Smc1aQ9CU62 Defa-ps11-201ENSMUST00000119719 299 ntBASIC6.08□□□□□ -1.44
Smc1aQ9CU62 Gm12074-201ENSMUST00000120189 219 ntBASIC6.08□□□□□ -1.44
Smc1aQ9CU62 Gm12222-201ENSMUST00000121368 260 ntBASIC6.08□□□□□ -1.44
Smc1aQ9CU62 Gm13007-201ENSMUST00000121866 365 ntBASIC6.08□□□□□ -1.44
Smc1aQ9CU62 Xlr5e-ps-201ENSMUST00000122043 711 ntBASIC6.08□□□□□ -1.44
Smc1aQ9CU62 Gm11197-201ENSMUST00000145158 839 ntBASIC6.08□□□□□ -1.44
Smc1aQ9CU62 Gm21973-201ENSMUST00000157020 358 ntAPPRIS P1 TSL 3 BASIC6.08□□□□□ -1.44
Smc1aQ9CU62 Gm24295-201ENSMUST00000158298 131 ntBASIC6.08□□□□□ -1.44
Smc1aQ9CU62 Gm3173-202ENSMUST00000164603 519 ntAPPRIS ALT2 TSL 1 (best) BASIC6.08□□□□□ -1.44
Smc1aQ9CU62 Gm3264-201ENSMUST00000166410 519 ntAPPRIS P2 TSL 1 (best) BASIC6.08□□□□□ -1.44
Smc1aQ9CU62 Gm8108-201ENSMUST00000167397 519 ntAPPRIS ALT2 TSL 5 BASIC6.08□□□□□ -1.44
Smc1aQ9CU62 Gm20523-201ENSMUST00000174340 1124 ntBASIC6.08□□□□□ -1.44
Smc1aQ9CU62 Gm22650-201ENSMUST00000175138 105 ntBASIC6.08□□□□□ -1.44
Smc1aQ9CU62 Gm22122-201ENSMUST00000175147 200 ntBASIC6.08□□□□□ -1.44
Smc1aQ9CU62 Gm24407-201ENSMUST00000177864 141 ntBASIC6.08□□□□□ -1.44
Smc1aQ9CU62 Gm3005-201ENSMUST00000178060 444 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
Smc1aQ9CU62 Gm3488-201ENSMUST00000178220 519 ntAPPRIS ALT2 TSL 1 (best) BASIC6.08□□□□□ -1.44
Smc1aQ9CU62 Gm3317-201ENSMUST00000179659 519 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
Smc1aQ9CU62 Gm22917-201ENSMUST00000180116 110 ntBASIC6.08□□□□□ -1.44
Smc1aQ9CU62 Mir6539-201ENSMUST00000183732 110 ntBASIC6.08□□□□□ -1.44
Smc1aQ9CU62 Gm37716-201ENSMUST00000193553 947 ntBASIC6.08□□□□□ -1.44
Smc1aQ9CU62 Gm9317-201ENSMUST00000197055 862 ntBASIC6.08□□□□□ -1.44
Smc1aQ9CU62 A230098N10Rik-202ENSMUST00000200055 356 ntTSL 2 BASIC6.08□□□□□ -1.44
Smc1aQ9CU62 Gm4874-201ENSMUST00000203589 691 ntBASIC6.08□□□□□ -1.44
Smc1aQ9CU62 Gm30928-201ENSMUST00000205858 459 ntTSL 3 BASIC6.08□□□□□ -1.44
Smc1aQ9CU62 Gm31510-202ENSMUST00000206795 239 ntTSL 3 BASIC6.08□□□□□ -1.44
Smc1aQ9CU62 Gm44993-201ENSMUST00000208435 842 ntTSL 3 BASIC6.08□□□□□ -1.44
Smc1aQ9CU62 Olfr1486-ps1-201ENSMUST00000208835 220 ntBASIC6.08□□□□□ -1.44
Smc1aQ9CU62 Olfr27-201ENSMUST00000214052 1076 ntAPPRIS P1 TSL 3 BASIC6.08□□□□□ -1.44
Smc1aQ9CU62 Ss18l2-204ENSMUST00000215104 315 ntTSL 5 BASIC6.08□□□□□ -1.44
Smc1aQ9CU62 Glrx-202ENSMUST00000220523 493 ntTSL 3 BASIC6.08□□□□□ -1.44
Smc1aQ9CU62 AC124732.4-201ENSMUST00000220930 1274 ntBASIC6.08□□□□□ -1.44
Smc1aQ9CU62 CT485612.3-201ENSMUST00000222179 408 ntBASIC6.08□□□□□ -1.44
Smc1aQ9CU62 AC154417.1-201ENSMUST00000223876 476 ntBASIC6.08□□□□□ -1.44
Smc1aQ9CU62 Olfr697-201ENSMUST00000050541 1047 ntAPPRIS P1 BASIC6.08□□□□□ -1.44
Smc1aQ9CU62 Bglap-201ENSMUST00000076048 440 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
Smc1aQ9CU62 Olfr1359-201ENSMUST00000077843 991 ntAPPRIS P1 BASIC6.08□□□□□ -1.44
Smc1aQ9CU62 Olfr31-202ENSMUST00000206009 4017 ntAPPRIS P1 TSL 2 BASIC6.08□□□□□ -1.44
Smc1aQ9CU62 6820402A03Rik-201ENSMUST00000194648 2654 ntBASIC6.08□□□□□ -1.44
Smc1aQ9CU62 Gm2832-201ENSMUST00000172412 1760 ntAPPRIS P1 TSL 5 BASIC6.08□□□□□ -1.44
Smc1aQ9CU62 Usp46-202ENSMUST00000119154 4738 ntTSL 5 BASIC6.08□□□□□ -1.44
Smc1aQ9CU62 Fbxw13-201ENSMUST00000061456 1485 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
Smc1aQ9CU62 Zfp280d-201ENSMUST00000098576 4387 ntAPPRIS P3 TSL 1 (best) BASIC6.08□□□□□ -1.44
Smc1aQ9CU62 Vmn1r202-202ENSMUST00000228020 5441 ntAPPRIS P1 BASIC6.08□□□□□ -1.44
Smc1aQ9CU62 Arpp21-231ENSMUST00000178410 3419 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
Smc1aQ9CU62 Lrrc4c-203ENSMUST00000162807 3132 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
Smc1aQ9CU62 Cnot7-203ENSMUST00000132032 2542 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
Smc1aQ9CU62 AC168056.3-201ENSMUST00000225395 2540 ntBASIC6.07□□□□□ -1.44
Smc1aQ9CU62 Fbxl13-201ENSMUST00000051358 2531 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
Smc1aQ9CU62 Vmn1r71-210ENSMUST00000228561 4747 ntAPPRIS ALT2 BASIC6.07□□□□□ -1.44
Smc1aQ9CU62 Gm37628-201ENSMUST00000194644 5440 ntBASIC6.07□□□□□ -1.44
Smc1aQ9CU62 Gm37930-201ENSMUST00000194308 1886 ntBASIC6.07□□□□□ -1.44
Smc1aQ9CU62 1700019J19Rik-202ENSMUST00000213583 1856 ntTSL 5 BASIC6.07□□□□□ -1.44
Smc1aQ9CU62 AC144772.1-201ENSMUST00000226372 2398 ntBASIC6.07□□□□□ -1.44
Smc1aQ9CU62 Ktn1-203ENSMUST00000185940 3869 ntAPPRIS ALT2 TSL 5 BASIC6.07□□□□□ -1.44
Smc1aQ9CU62 Ktn1-208ENSMUST00000187039 3875 ntAPPRIS ALT2 TSL 5 BASIC6.07□□□□□ -1.44
Smc1aQ9CU62 Gm42600-201ENSMUST00000202081 3588 ntBASIC6.07□□□□□ -1.44
Smc1aQ9CU62 Trav12n-1-201ENSMUST00000103587 344 ntAPPRIS ALT2 BASIC6.07□□□□□ -1.44
Smc1aQ9CU62 Mir1188-201ENSMUST00000116756 120 ntBASIC6.07□□□□□ -1.44
Smc1aQ9CU62 Gm14769-201ENSMUST00000118590 432 ntBASIC6.07□□□□□ -1.44
Smc1aQ9CU62 Gm6305-201ENSMUST00000121027 1012 ntBASIC6.07□□□□□ -1.44
Smc1aQ9CU62 Gm24692-201ENSMUST00000157761 146 ntBASIC6.07□□□□□ -1.44
Smc1aQ9CU62 Gm25227-201ENSMUST00000158204 112 ntBASIC6.07□□□□□ -1.44
Smc1aQ9CU62 Gm17160-201ENSMUST00000170645 260 ntTSL 3 BASIC6.07□□□□□ -1.44
Smc1aQ9CU62 Gm8362-202ENSMUST00000170673 997 ntAPPRIS ALT2 TSL 5 BASIC6.07□□□□□ -1.44
Smc1aQ9CU62 Obox1-205ENSMUST00000173443 835 ntAPPRIS P1 TSL 5 BASIC6.07□□□□□ -1.44
Smc1aQ9CU62 Obox2-204ENSMUST00000174305 834 ntAPPRIS P1 TSL 5 BASIC6.07□□□□□ -1.44
Smc1aQ9CU62 Mdrl-201ENSMUST00000180483 1020 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
Smc1aQ9CU62 Gm26693-201ENSMUST00000181318 1021 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
Smc1aQ9CU62 Trav12d-1-202ENSMUST00000183652 344 ntAPPRIS ALT2 BASIC6.07□□□□□ -1.44
Smc1aQ9CU62 Mir6986-201ENSMUST00000184483 58 ntBASIC6.07□□□□□ -1.44
Smc1aQ9CU62 Lockd-204ENSMUST00000184991 243 ntTSL 5 BASIC6.07□□□□□ -1.44
Smc1aQ9CU62 AV026068-202ENSMUST00000185793 486 ntTSL 2 BASIC6.07□□□□□ -1.44
Smc1aQ9CU62 Gm18728-201ENSMUST00000186155 753 ntBASIC6.07□□□□□ -1.44
Smc1aQ9CU62 Gm18802-201ENSMUST00000186270 888 ntBASIC6.07□□□□□ -1.44
Smc1aQ9CU62 Gm28238-201ENSMUST00000188102 383 ntTSL 5 BASIC6.07□□□□□ -1.44
Smc1aQ9CU62 Gm18036-201ENSMUST00000195256 272 ntBASIC6.07□□□□□ -1.44
Smc1aQ9CU62 Gm18702-201ENSMUST00000196923 588 ntBASIC6.07□□□□□ -1.44
Smc1aQ9CU62 Gm2142-201ENSMUST00000197899 589 ntBASIC6.07□□□□□ -1.44
Smc1aQ9CU62 Gm44132-201ENSMUST00000205142 151 ntBASIC6.07□□□□□ -1.44
Smc1aQ9CU62 Gm3912-203ENSMUST00000211024 367 ntBASIC6.07□□□□□ -1.44
Smc1aQ9CU62 Gm26861-206ENSMUST00000222633 1039 ntTSL 5 BASIC6.07□□□□□ -1.44
Smc1aQ9CU62 AC153794.2-201ENSMUST00000222650 550 ntBASIC6.07□□□□□ -1.44
Smc1aQ9CU62 3830406C13Rik-203ENSMUST00000223631 1014 ntBASIC6.07□□□□□ -1.44
Smc1aQ9CU62 AV026068-231ENSMUST00000225862 482 ntBASIC6.07□□□□□ -1.44
Smc1aQ9CU62 AC154806.3-201ENSMUST00000227376 439 ntBASIC6.07□□□□□ -1.44
Smc1aQ9CU62 AC154806.4-201ENSMUST00000227406 439 ntBASIC6.07□□□□□ -1.44
Smc1aQ9CU62 AC160120.1-201ENSMUST00000227446 663 ntBASIC6.07□□□□□ -1.44
Smc1aQ9CU62 Olfr684-201ENSMUST00000060893 939 ntAPPRIS P1 BASIC6.07□□□□□ -1.44
Smc1aQ9CU62 Rnase2a-201ENSMUST00000061936 690 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
Smc1aQ9CU62 Tmem69-201ENSMUST00000069674 974 ntAPPRIS P1 TSL 2 BASIC6.07□□□□□ -1.44
Smc1aQ9CU62 Olfr1406-201ENSMUST00000072395 1063 ntAPPRIS P1 BASIC6.07□□□□□ -1.44
Smc1aQ9CU62 A530046M15Rik-201ENSMUST00000221778 1538 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
Smc1aQ9CU62 Gm26835-201ENSMUST00000181888 3274 ntTSL 5 BASIC6.07□□□□□ -1.44
Smc1aQ9CU62 Zscan4e-202ENSMUST00000210521 1745 ntAPPRIS P1 TSL 5 BASIC6.07□□□□□ -1.44
Retrieved 100 of 76,532 protein–RNA pairs in 92.4 ms