Protein–RNA interactions for Protein: Q8CEI3

Ccdc28a, Coiled-coil domain-containing 28A, mousemouse

Predictions only

Length 192 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc28aQ8CEI3 1700064J06Rik-201ENSMUST00000187551 386 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
Ccdc28aQ8CEI3 Gm37065-201ENSMUST00000191636 444 ntTSL 2 BASIC5.39□□□□□ -1.55
Ccdc28aQ8CEI3 Gm20239-201ENSMUST00000196610 982 ntBASIC5.39□□□□□ -1.55
Ccdc28aQ8CEI3 Gm19708-201ENSMUST00000199386 543 ntTSL 2 BASIC5.39□□□□□ -1.55
Ccdc28aQ8CEI3 Gm35648-201ENSMUST00000202304 475 ntBASIC5.39□□□□□ -1.55
Ccdc28aQ8CEI3 Gm43456-201ENSMUST00000202519 457 ntBASIC5.39□□□□□ -1.55
Ccdc28aQ8CEI3 Gm44261-201ENSMUST00000203337 209 ntBASIC5.39□□□□□ -1.55
Ccdc28aQ8CEI3 Fxyd4-207ENSMUST00000204214 550 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
Ccdc28aQ8CEI3 Gm44132-201ENSMUST00000205142 151 ntBASIC5.39□□□□□ -1.55
Ccdc28aQ8CEI3 Gm30928-201ENSMUST00000205858 459 ntTSL 3 BASIC5.39□□□□□ -1.55
Ccdc28aQ8CEI3 4833404L02Rik-201ENSMUST00000206290 908 ntBASIC5.39□□□□□ -1.55
Ccdc28aQ8CEI3 Olfr712-ps1-201ENSMUST00000207690 950 ntBASIC5.39□□□□□ -1.55
Ccdc28aQ8CEI3 Dlg2-216ENSMUST00000209170 1057 ntTSL 2 BASIC5.39□□□□□ -1.55
Ccdc28aQ8CEI3 AC160031.1-201ENSMUST00000219914 522 ntBASIC5.39□□□□□ -1.55
Ccdc28aQ8CEI3 AC157515.1-201ENSMUST00000220953 450 ntBASIC5.39□□□□□ -1.55
Ccdc28aQ8CEI3 Ocm-201ENSMUST00000031622 658 ntAPPRIS P1 TSL 5 BASIC5.39□□□□□ -1.55
Ccdc28aQ8CEI3 Sprr2d-201ENSMUST00000047477 681 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
Ccdc28aQ8CEI3 Olfr161-201ENSMUST00000061541 942 ntAPPRIS P1 BASIC5.39□□□□□ -1.55
Ccdc28aQ8CEI3 4933411G06Rik-201ENSMUST00000075909 1022 ntBASIC5.39□□□□□ -1.55
Ccdc28aQ8CEI3 Gm25134-201ENSMUST00000082646 160 ntBASIC5.39□□□□□ -1.55
Ccdc28aQ8CEI3 Gm22684-201ENSMUST00000082849 132 ntBASIC5.39□□□□□ -1.55
Ccdc28aQ8CEI3 Gm44439-201ENSMUST00000203379 3592 ntBASIC5.39□□□□□ -1.55
Ccdc28aQ8CEI3 Gm38590-202ENSMUST00000210654 1803 ntTSL 5 BASIC5.39□□□□□ -1.55
Ccdc28aQ8CEI3 Adam5-205ENSMUST00000209935 2272 ntAPPRIS ALT2 TSL 1 (best) BASIC5.39□□□□□ -1.55
Ccdc28aQ8CEI3 Plcz1-201ENSMUST00000032356 2271 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
Ccdc28aQ8CEI3 Pih1d3-201ENSMUST00000027230 1451 ntAPPRIS P1 BASIC5.39□□□□□ -1.55
Ccdc28aQ8CEI3 F630028O10Rik-201ENSMUST00000133125 2771 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
Ccdc28aQ8CEI3 Kcnma1-204ENSMUST00000112423 3664 ntTSL 5 BASIC5.38□□□□□ -1.55
Ccdc28aQ8CEI3 Platr25-202ENSMUST00000220733 2859 ntAPPRIS P5 TSL 5 BASIC5.38□□□□□ -1.55
Ccdc28aQ8CEI3 Vmn1r84-204ENSMUST00000227427 2880 ntAPPRIS ALT2 BASIC5.38□□□□□ -1.55
Ccdc28aQ8CEI3 Zfp143-202ENSMUST00000169638 2914 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
Ccdc28aQ8CEI3 Gm38243-201ENSMUST00000194737 1567 ntBASIC5.38□□□□□ -1.55
Ccdc28aQ8CEI3 AC170999.1-201ENSMUST00000226359 1585 ntBASIC5.38□□□□□ -1.55
Ccdc28aQ8CEI3 Cd33-203ENSMUST00000205503 5728 ntAPPRIS P3 TSL 1 (best) BASIC5.38□□□□□ -1.55
Ccdc28aQ8CEI3 Vmn2r109-201ENSMUST00000167093 2577 ntAPPRIS P1 TSL 5 BASIC5.38□□□□□ -1.55
Ccdc28aQ8CEI3 Gm37509-201ENSMUST00000194867 3169 ntBASIC5.38□□□□□ -1.55
Ccdc28aQ8CEI3 Gm26753-201ENSMUST00000181938 2731 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
Ccdc28aQ8CEI3 Hrnr-202ENSMUST00000093774 11187 ntAPPRIS ALT2 TSL 1 (best) BASIC5.38□□□□□ -1.55
Ccdc28aQ8CEI3 Slco1c1-203ENSMUST00000203140 2771 ntAPPRIS ALT2 TSL 5 BASIC5.38□□□□□ -1.55
Ccdc28aQ8CEI3 Mir879-201ENSMUST00000104703 76 ntBASIC5.38□□□□□ -1.55
Ccdc28aQ8CEI3 Gm15233-201ENSMUST00000118747 400 ntBASIC5.38□□□□□ -1.55
Ccdc28aQ8CEI3 Gm15791-201ENSMUST00000120365 319 ntBASIC5.38□□□□□ -1.55
Ccdc28aQ8CEI3 Gm25176-201ENSMUST00000122640 125 ntBASIC5.38□□□□□ -1.55
Ccdc28aQ8CEI3 Gm12256-201ENSMUST00000132394 446 ntTSL 3 BASIC5.38□□□□□ -1.55
Ccdc28aQ8CEI3 Gm14027-201ENSMUST00000135186 622 ntTSL 3 BASIC5.38□□□□□ -1.55
Ccdc28aQ8CEI3 Gm25459-201ENSMUST00000157953 114 ntBASIC5.38□□□□□ -1.55
Ccdc28aQ8CEI3 Gm17669-201ENSMUST00000163749 465 ntAPPRIS P1 BASIC5.38□□□□□ -1.55
Ccdc28aQ8CEI3 Gm8256-201ENSMUST00000169178 453 ntBASIC5.38□□□□□ -1.55
Ccdc28aQ8CEI3 Il6-202ENSMUST00000195978 651 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
Ccdc28aQ8CEI3 Il6-204ENSMUST00000199765 963 ntAPPRIS ALT2 TSL 2 BASIC5.38□□□□□ -1.55
Ccdc28aQ8CEI3 1700092E16Rik-201ENSMUST00000214766 753 ntBASIC5.38□□□□□ -1.55
Ccdc28aQ8CEI3 AC165256.1-201ENSMUST00000216687 670 ntTSL 2 BASIC5.38□□□□□ -1.55
Ccdc28aQ8CEI3 AC156572.1-201ENSMUST00000221040 1161 ntTSL 5 BASIC5.38□□□□□ -1.55
Ccdc28aQ8CEI3 AC163631.1-201ENSMUST00000225041 598 ntBASIC5.38□□□□□ -1.55
Ccdc28aQ8CEI3 AC107711.2-203ENSMUST00000227827 762 ntBASIC5.38□□□□□ -1.55
Ccdc28aQ8CEI3 Cma2-202ENSMUST00000228263 857 ntBASIC5.38□□□□□ -1.55
Ccdc28aQ8CEI3 Olfr1341-201ENSMUST00000061215 939 ntAPPRIS P1 BASIC5.38□□□□□ -1.55
Ccdc28aQ8CEI3 Vmn1r215-201ENSMUST00000072972 1048 ntAPPRIS P1 BASIC5.38□□□□□ -1.55
Ccdc28aQ8CEI3 Magea1-201ENSMUST00000078193 1108 ntAPPRIS P1 BASIC5.38□□□□□ -1.55
Ccdc28aQ8CEI3 Gm26330-201ENSMUST00000082817 104 ntBASIC5.38□□□□□ -1.55
Ccdc28aQ8CEI3 Olfr199-201ENSMUST00000099657 931 ntAPPRIS P1 BASIC5.38□□□□□ -1.55
Ccdc28aQ8CEI3 Olfr1034-201ENSMUST00000213496 4882 ntAPPRIS P1 BASIC5.38□□□□□ -1.55
Ccdc28aQ8CEI3 Olfr293-202ENSMUST00000214401 2852 ntAPPRIS P1 TSL 5 BASIC5.38□□□□□ -1.55
Ccdc28aQ8CEI3 Gm17021-202ENSMUST00000214413 2371 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
Ccdc28aQ8CEI3 Gm7680-201ENSMUST00000216198 1348 ntBASIC5.38□□□□□ -1.55
Ccdc28aQ8CEI3 AC158388.2-201ENSMUST00000223665 1314 ntBASIC5.38□□□□□ -1.55
Ccdc28aQ8CEI3 AC115760.1-201ENSMUST00000225160 1327 ntBASIC5.38□□□□□ -1.55
Ccdc28aQ8CEI3 Serpinb9g-201ENSMUST00000081927 1927 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
Ccdc28aQ8CEI3 Pou2f1-208ENSMUST00000160260 13022 ntAPPRIS ALT2 TSL 1 (best) BASIC5.38□□□□□ -1.55
Ccdc28aQ8CEI3 Uhmk1-203ENSMUST00000150821 7676 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
Ccdc28aQ8CEI3 Gm7416-201ENSMUST00000117448 1487 ntBASIC5.38□□□□□ -1.55
Ccdc28aQ8CEI3 Gm10352-201ENSMUST00000166474 1482 ntAPPRIS P1 TSL 5 BASIC5.38□□□□□ -1.55
Ccdc28aQ8CEI3 Cep57l1-201ENSMUST00000019951 2177 ntAPPRIS ALT2 TSL 5 BASIC5.38□□□□□ -1.55
Ccdc28aQ8CEI3 1700030N03Rik-203ENSMUST00000190575 3146 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
Ccdc28aQ8CEI3 Olfr620-201ENSMUST00000052152 3157 ntAPPRIS P1 BASIC5.37□□□□□ -1.55
Ccdc28aQ8CEI3 Gm38253-201ENSMUST00000194058 4678 ntBASIC5.37□□□□□ -1.55
Ccdc28aQ8CEI3 Gabrg2-201ENSMUST00000070725 4041 ntAPPRIS ALT1 TSL 1 (best) BASIC5.37□□□□□ -1.55
Ccdc28aQ8CEI3 Vmn1r200-205ENSMUST00000228726 5525 ntAPPRIS P2 BASIC5.37□□□□□ -1.55
Ccdc28aQ8CEI3 Serpini1-201ENSMUST00000029423 4091 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
Ccdc28aQ8CEI3 Rnf213-201ENSMUST00000093902 16716 ntAPPRIS ALT2 TSL 5 BASIC5.37□□□□□ -1.55
Ccdc28aQ8CEI3 Gm24350-201ENSMUST00000104163 133 ntBASIC5.37□□□□□ -1.55
Ccdc28aQ8CEI3 Apoa2-203ENSMUST00000111320 470 ntAPPRIS P1 TSL 2 BASIC5.37□□□□□ -1.55
Ccdc28aQ8CEI3 Fam107b-205ENSMUST00000115055 515 ntAPPRIS P1 TSL 2 BASIC5.37□□□□□ -1.55
Ccdc28aQ8CEI3 Gm15012-201ENSMUST00000119176 106 ntBASIC5.37□□□□□ -1.55
Ccdc28aQ8CEI3 Gm23669-201ENSMUST00000157470 128 ntBASIC5.37□□□□□ -1.55
Ccdc28aQ8CEI3 Gm25489-201ENSMUST00000158727 141 ntBASIC5.37□□□□□ -1.55
Ccdc28aQ8CEI3 Ear-ps5-201ENSMUST00000164700 463 ntBASIC5.37□□□□□ -1.55
Ccdc28aQ8CEI3 1700034K08Rik-202ENSMUST00000188082 619 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
Ccdc28aQ8CEI3 Gm37191-201ENSMUST00000193346 388 ntBASIC5.37□□□□□ -1.55
Ccdc28aQ8CEI3 Gm10048-201ENSMUST00000194196 372 ntBASIC5.37□□□□□ -1.55
Ccdc28aQ8CEI3 Gm44930-201ENSMUST00000207545 489 ntTSL 5 BASIC5.37□□□□□ -1.55
Ccdc28aQ8CEI3 Gm45249-201ENSMUST00000211021 348 ntBASIC5.37□□□□□ -1.55
Ccdc28aQ8CEI3 Gm18996-201ENSMUST00000214851 755 ntBASIC5.37□□□□□ -1.55
Ccdc28aQ8CEI3 AC166323.1-201ENSMUST00000217756 367 ntBASIC5.37□□□□□ -1.55
Ccdc28aQ8CEI3 AC123061.2-201ENSMUST00000226234 802 ntBASIC5.37□□□□□ -1.55
Ccdc28aQ8CEI3 AC113031.3-201ENSMUST00000226552 190 ntBASIC5.37□□□□□ -1.55
Ccdc28aQ8CEI3 AC123665.4-201ENSMUST00000228790 249 ntBASIC5.37□□□□□ -1.55
Ccdc28aQ8CEI3 Gm25139-201ENSMUST00000083247 210 ntBASIC5.37□□□□□ -1.55
Ccdc28aQ8CEI3 Mir199a-2-201ENSMUST00000093618 110 ntBASIC5.37□□□□□ -1.55
Ccdc28aQ8CEI3 Gm4973-201ENSMUST00000206925 1334 ntBASIC5.37□□□□□ -1.55
Retrieved 100 of 76,532 protein–RNA pairs in 68.6 ms