Protein–RNA interactions for Protein: Q8CEG5

Ccdc28b, Coiled-coil domain-containing protein 28B, mousemouse

Predictions only

Length 200 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc28bQ8CEG5 Gm7205-201ENSMUST00000196032 1323 ntBASIC5.24□□□□□ -1.57
Ccdc28bQ8CEG5 CT009754.2-201ENSMUST00000221683 3661 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
Ccdc28bQ8CEG5 Olfr1265-202ENSMUST00000214855 5701 ntAPPRIS P1 TSL 5 BASIC5.24□□□□□ -1.57
Ccdc28bQ8CEG5 Zfp950-204ENSMUST00000143264 4825 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
Ccdc28bQ8CEG5 Gm22371-201ENSMUST00000104588 130 ntBASIC5.24□□□□□ -1.57
Ccdc28bQ8CEG5 Gm14711-201ENSMUST00000117056 217 ntBASIC5.24□□□□□ -1.57
Ccdc28bQ8CEG5 Gm13172-201ENSMUST00000118685 256 ntBASIC5.24□□□□□ -1.57
Ccdc28bQ8CEG5 Gm15012-201ENSMUST00000119176 106 ntBASIC5.24□□□□□ -1.57
Ccdc28bQ8CEG5 Gm15331-201ENSMUST00000120225 385 ntBASIC5.24□□□□□ -1.57
Ccdc28bQ8CEG5 2310044K18Rik-201ENSMUST00000125131 618 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
Ccdc28bQ8CEG5 Gm14027-201ENSMUST00000135186 622 ntTSL 3 BASIC5.24□□□□□ -1.57
Ccdc28bQ8CEG5 Gm11364-201ENSMUST00000137593 297 ntTSL 5 BASIC5.24□□□□□ -1.57
Ccdc28bQ8CEG5 Gm13773-201ENSMUST00000156693 583 ntTSL 3 BASIC5.24□□□□□ -1.57
Ccdc28bQ8CEG5 Gm22915-201ENSMUST00000157615 136 ntBASIC5.24□□□□□ -1.57
Ccdc28bQ8CEG5 Gm24733-201ENSMUST00000158863 253 ntBASIC5.24□□□□□ -1.57
Ccdc28bQ8CEG5 Gm3170-201ENSMUST00000168753 850 ntBASIC5.24□□□□□ -1.57
Ccdc28bQ8CEG5 Mir5125-201ENSMUST00000175240 79 ntBASIC5.24□□□□□ -1.57
Ccdc28bQ8CEG5 Gm3348-201ENSMUST00000177813 850 ntBASIC5.24□□□□□ -1.57
Ccdc28bQ8CEG5 Gm10428-201ENSMUST00000178750 399 ntAPPRIS P1 BASIC5.24□□□□□ -1.57
Ccdc28bQ8CEG5 Gm19791-201ENSMUST00000180398 859 ntBASIC5.24□□□□□ -1.57
Ccdc28bQ8CEG5 6330403N20Rik-201ENSMUST00000180467 1189 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
Ccdc28bQ8CEG5 1810041H14Rik-202ENSMUST00000187218 434 ntTSL 3 BASIC5.24□□□□□ -1.57
Ccdc28bQ8CEG5 9430037O13Rik-201ENSMUST00000192556 1008 ntBASIC5.24□□□□□ -1.57
Ccdc28bQ8CEG5 Tshb-205ENSMUST00000197322 476 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
Ccdc28bQ8CEG5 Gm36548-202ENSMUST00000200222 494 ntTSL 5 BASIC5.24□□□□□ -1.57
Ccdc28bQ8CEG5 Gm44277-201ENSMUST00000205128 649 ntBASIC5.24□□□□□ -1.57
Ccdc28bQ8CEG5 Gm30928-202ENSMUST00000206881 271 ntTSL 3 BASIC5.24□□□□□ -1.57
Ccdc28bQ8CEG5 Gm10610-203ENSMUST00000208877 1206 ntTSL 5 BASIC5.24□□□□□ -1.57
Ccdc28bQ8CEG5 Gm45525-201ENSMUST00000210800 389 ntBASIC5.24□□□□□ -1.57
Ccdc28bQ8CEG5 AC102287.1-201ENSMUST00000211412 454 ntBASIC5.24□□□□□ -1.57
Ccdc28bQ8CEG5 Gm34263-202ENSMUST00000214353 303 ntTSL 5 BASIC5.24□□□□□ -1.57
Ccdc28bQ8CEG5 AC104906.1-201ENSMUST00000218122 913 ntBASIC5.24□□□□□ -1.57
Ccdc28bQ8CEG5 AV026068-216ENSMUST00000223874 328 ntBASIC5.24□□□□□ -1.57
Ccdc28bQ8CEG5 AC113198.1-201ENSMUST00000226353 832 ntBASIC5.24□□□□□ -1.57
Ccdc28bQ8CEG5 AC122393.2-201ENSMUST00000226404 1093 ntBASIC5.24□□□□□ -1.57
Ccdc28bQ8CEG5 AC101205.1-201ENSMUST00000227916 907 ntBASIC5.24□□□□□ -1.57
Ccdc28bQ8CEG5 Wfdc15a-201ENSMUST00000063251 488 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
Ccdc28bQ8CEG5 Oosp3-201ENSMUST00000069760 807 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
Ccdc28bQ8CEG5 Olfr300-ps1-201ENSMUST00000174262 2395 ntAPPRIS P1 TSL 5 BASIC5.24□□□□□ -1.57
Ccdc28bQ8CEG5 Olfr586-202ENSMUST00000211075 4562 ntAPPRIS ALT2 TSL 5 BASIC5.24□□□□□ -1.57
Ccdc28bQ8CEG5 Als2cr12-203ENSMUST00000188772 1382 ntAPPRIS ALT2 TSL 1 (best) BASIC5.24□□□□□ -1.57
Ccdc28bQ8CEG5 Lin7c-201ENSMUST00000028583 4228 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
Ccdc28bQ8CEG5 Ccna2-205ENSMUST00000196316 2001 ntTSL 5 BASIC5.24□□□□□ -1.57
Ccdc28bQ8CEG5 Slco1b2-201ENSMUST00000042812 3307 ntAPPRIS P2 TSL 1 (best) BASIC5.24□□□□□ -1.57
Ccdc28bQ8CEG5 4933430A20Rik-201ENSMUST00000210943 1558 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
Ccdc28bQ8CEG5 Cul3-202ENSMUST00000164108 2442 ntTSL 5 BASIC5.24□□□□□ -1.57
Ccdc28bQ8CEG5 Adgb-205ENSMUST00000179956 5218 ntAPPRIS ALT2 TSL 5 BASIC5.24□□□□□ -1.57
Ccdc28bQ8CEG5 Olfr1297-202ENSMUST00000213398 6998 ntAPPRIS P1 TSL 2 BASIC5.24□□□□□ -1.57
Ccdc28bQ8CEG5 Gm5799-201ENSMUST00000169023 1314 ntAPPRIS P1 TSL 5 BASIC5.23□□□□□ -1.57
Ccdc28bQ8CEG5 C130073E24Rik-202ENSMUST00000211313 14112 ntTSL 5 BASIC5.23□□□□□ -1.57
Ccdc28bQ8CEG5 Cdh7-203ENSMUST00000129923 1409 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
Ccdc28bQ8CEG5 4930404I05Rik-201ENSMUST00000125902 2675 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
Ccdc28bQ8CEG5 Zfp955b-201ENSMUST00000099414 1638 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
Ccdc28bQ8CEG5 Gm42923-201ENSMUST00000198438 2896 ntBASIC5.23□□□□□ -1.57
Ccdc28bQ8CEG5 Gm10471-201ENSMUST00000094946 2967 ntAPPRIS P1 TSL 5 BASIC5.23□□□□□ -1.57
Ccdc28bQ8CEG5 Vmn1r39-203ENSMUST00000227285 2245 ntAPPRIS ALT2 BASIC5.23□□□□□ -1.57
Ccdc28bQ8CEG5 Zfp951-202ENSMUST00000186219 2904 ntAPPRIS P2 TSL 5 BASIC5.23□□□□□ -1.57
Ccdc28bQ8CEG5 Tmem72-201ENSMUST00000056623 17152 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
Ccdc28bQ8CEG5 Zfp972-202ENSMUST00000108934 561 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
Ccdc28bQ8CEG5 Gm12193-201ENSMUST00000117250 379 ntBASIC5.23□□□□□ -1.57
Ccdc28bQ8CEG5 Gm15166-201ENSMUST00000120790 385 ntBASIC5.23□□□□□ -1.57
Ccdc28bQ8CEG5 Gm14363-201ENSMUST00000122304 409 ntBASIC5.23□□□□□ -1.57
Ccdc28bQ8CEG5 Gm13669-201ENSMUST00000122366 457 ntBASIC5.23□□□□□ -1.57
Ccdc28bQ8CEG5 n-R5s21-201ENSMUST00000122692 117 ntBASIC5.23□□□□□ -1.57
Ccdc28bQ8CEG5 1700047A11Rik-201ENSMUST00000144750 427 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
Ccdc28bQ8CEG5 Gm15445-201ENSMUST00000146700 603 ntTSL 5 BASIC5.23□□□□□ -1.57
Ccdc28bQ8CEG5 Gm15866-201ENSMUST00000149048 785 ntTSL 5 BASIC5.23□□□□□ -1.57
Ccdc28bQ8CEG5 Gm15275-201ENSMUST00000154752 347 ntBASIC5.23□□□□□ -1.57
Ccdc28bQ8CEG5 Gm23318-201ENSMUST00000158000 108 ntBASIC5.23□□□□□ -1.57
Ccdc28bQ8CEG5 Gm23995-201ENSMUST00000158060 129 ntBASIC5.23□□□□□ -1.57
Ccdc28bQ8CEG5 Gm22428-201ENSMUST00000158554 132 ntBASIC5.23□□□□□ -1.57
Ccdc28bQ8CEG5 Fam240b-201ENSMUST00000180282 1097 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
Ccdc28bQ8CEG5 Pafah1b1-ps1-201ENSMUST00000181263 1046 ntBASIC5.23□□□□□ -1.57
Ccdc28bQ8CEG5 Gm26665-201ENSMUST00000181378 839 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
Ccdc28bQ8CEG5 Igkv19-93-201ENSMUST00000183936 344 ntAPPRIS ALT2 BASIC5.23□□□□□ -1.57
Ccdc28bQ8CEG5 Gm27679-201ENSMUST00000184612 84 ntBASIC5.23□□□□□ -1.57
Ccdc28bQ8CEG5 Gm29484-201ENSMUST00000186067 324 ntBASIC5.23□□□□□ -1.57
Ccdc28bQ8CEG5 Gm37684-201ENSMUST00000192779 355 ntBASIC5.23□□□□□ -1.57
Ccdc28bQ8CEG5 Gm43276-201ENSMUST00000199712 364 ntBASIC5.23□□□□□ -1.57
Ccdc28bQ8CEG5 Gm44412-201ENSMUST00000203018 294 ntBASIC5.23□□□□□ -1.57
Ccdc28bQ8CEG5 Gm43894-201ENSMUST00000203274 688 ntBASIC5.23□□□□□ -1.57
Ccdc28bQ8CEG5 Gm44538-201ENSMUST00000205615 348 ntBASIC5.23□□□□□ -1.57
Ccdc28bQ8CEG5 Ankrd42-207ENSMUST00000207131 1220 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
Ccdc28bQ8CEG5 Gm45075-201ENSMUST00000208426 649 ntTSL 3 BASIC5.23□□□□□ -1.57
Ccdc28bQ8CEG5 Olfr1486-ps1-201ENSMUST00000208835 220 ntBASIC5.23□□□□□ -1.57
Ccdc28bQ8CEG5 Gm45646-201ENSMUST00000210983 441 ntTSL 5 BASIC5.23□□□□□ -1.57
Ccdc28bQ8CEG5 Gm33838-201ENSMUST00000214038 786 ntTSL 5 BASIC5.23□□□□□ -1.57
Ccdc28bQ8CEG5 AC153821.1-201ENSMUST00000217893 581 ntTSL 2 BASIC5.23□□□□□ -1.57
Ccdc28bQ8CEG5 AC160863.2-201ENSMUST00000218392 858 ntTSL 5 BASIC5.23□□□□□ -1.57
Ccdc28bQ8CEG5 AC105169.1-201ENSMUST00000218912 1294 ntBASIC5.23□□□□□ -1.57
Ccdc28bQ8CEG5 9430031K09Rik-201ENSMUST00000222913 925 ntBASIC5.23□□□□□ -1.57
Ccdc28bQ8CEG5 AC131117.1-201ENSMUST00000225154 1171 ntBASIC5.23□□□□□ -1.57
Ccdc28bQ8CEG5 AC102139.1-201ENSMUST00000227000 251 ntBASIC5.23□□□□□ -1.57
Ccdc28bQ8CEG5 Olfr1342-201ENSMUST00000060562 1002 ntAPPRIS P1 BASIC5.23□□□□□ -1.57
Ccdc28bQ8CEG5 Rnase2a-201ENSMUST00000061936 690 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
Ccdc28bQ8CEG5 Olfr994-201ENSMUST00000099925 945 ntAPPRIS P1 BASIC5.23□□□□□ -1.57
Ccdc28bQ8CEG5 Olfr1382-202ENSMUST00000213152 4236 ntAPPRIS P1 TSL 5 BASIC5.23□□□□□ -1.57
Ccdc28bQ8CEG5 Lrrc9-206ENSMUST00000162159 4739 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
Ccdc28bQ8CEG5 Xlr3c-201ENSMUST00000080839 1584 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
Ccdc28bQ8CEG5 Zfp811-201ENSMUST00000080905 1656 ntTSL 5 BASIC5.23□□□□□ -1.57
Retrieved 100 of 76,532 protein–RNA pairs in 71.6 ms