Protein–RNA interactions for Protein: Q8CEC0

Nup88, Nuclear pore complex protein Nup88, mousemouse

Known RBP Predictions only

Length 753 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nup88Q8CEC0 Pum2-201ENSMUST00000020915 3587 ntAPPRIS ALT2 TSL 1 (best) BASIC6.32□□□□□ -1.4
Nup88Q8CEC0 Ubtfl1-203ENSMUST00000169398 4430 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
Nup88Q8CEC0 AC105407.2-201ENSMUST00000223707 3911 ntBASIC6.31□□□□□ -1.4
Nup88Q8CEC0 Pkhd1-201ENSMUST00000088448 12935 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
Nup88Q8CEC0 Il31ra-201ENSMUST00000051756 3680 ntAPPRIS P2 TSL 1 (best) BASIC6.31□□□□□ -1.4
Nup88Q8CEC0 Vmn2r124-201ENSMUST00000176802 2568 ntAPPRIS P1 TSL 5 BASIC6.31□□□□□ -1.4
Nup88Q8CEC0 9330159M07Rik-201ENSMUST00000180712 2702 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
Nup88Q8CEC0 Gm19136-201ENSMUST00000190706 2067 ntBASIC6.31□□□□□ -1.4
Nup88Q8CEC0 Olfr1094-201ENSMUST00000105211 1147 ntAPPRIS P1 BASIC6.31□□□□□ -1.4
Nup88Q8CEC0 Arhgdib-202ENSMUST00000111891 828 ntAPPRIS P1 TSL 2 BASIC6.31□□□□□ -1.4
Nup88Q8CEC0 Gm15741-201ENSMUST00000119401 754 ntBASIC6.31□□□□□ -1.4
Nup88Q8CEC0 Gm13506-201ENSMUST00000120391 1083 ntBASIC6.31□□□□□ -1.4
Nup88Q8CEC0 Gm6175-201ENSMUST00000121351 400 ntBASIC6.31□□□□□ -1.4
Nup88Q8CEC0 Crls1-204ENSMUST00000124836 1267 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
Nup88Q8CEC0 Gm21973-201ENSMUST00000157020 358 ntAPPRIS P1 TSL 3 BASIC6.31□□□□□ -1.4
Nup88Q8CEC0 Gm22261-201ENSMUST00000158691 324 ntBASIC6.31□□□□□ -1.4
Nup88Q8CEC0 Gm8362-202ENSMUST00000170673 997 ntAPPRIS ALT2 TSL 5 BASIC6.31□□□□□ -1.4
Nup88Q8CEC0 Olfr753-ps1-202ENSMUST00000174673 919 ntBASIC6.31□□□□□ -1.4
Nup88Q8CEC0 Gm10251-201ENSMUST00000178788 384 ntAPPRIS P1 TSL 5 BASIC6.31□□□□□ -1.4
Nup88Q8CEC0 Mir7006-201ENSMUST00000183624 69 ntBASIC6.31□□□□□ -1.4
Nup88Q8CEC0 Zcchc10-201ENSMUST00000018383 1267 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
Nup88Q8CEC0 Gm29570-201ENSMUST00000185813 681 ntTSL 3 BASIC6.31□□□□□ -1.4
Nup88Q8CEC0 Gm28873-201ENSMUST00000186130 667 ntTSL 2 BASIC6.31□□□□□ -1.4
Nup88Q8CEC0 Gm28652-201ENSMUST00000187008 599 ntTSL 5 BASIC6.31□□□□□ -1.4
Nup88Q8CEC0 Gm4410-201ENSMUST00000199349 686 ntBASIC6.31□□□□□ -1.4
Nup88Q8CEC0 Gm43522-202ENSMUST00000200185 442 ntTSL 3 BASIC6.31□□□□□ -1.4
Nup88Q8CEC0 Gm3279-201ENSMUST00000203099 1092 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
Nup88Q8CEC0 Gm44184-201ENSMUST00000204290 132 ntBASIC6.31□□□□□ -1.4
Nup88Q8CEC0 Gm36864-201ENSMUST00000205530 684 ntAPPRIS ALT2 TSL 3 BASIC6.31□□□□□ -1.4
Nup88Q8CEC0 4930407I19Rik-201ENSMUST00000220265 923 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
Nup88Q8CEC0 Gnrh1-203ENSMUST00000223951 411 ntAPPRIS P1 BASIC6.31□□□□□ -1.4
Nup88Q8CEC0 Rnase9-201ENSMUST00000064214 1189 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
Nup88Q8CEC0 Vmn1r46-201ENSMUST00000075797 930 ntAPPRIS P1 BASIC6.31□□□□□ -1.4
Nup88Q8CEC0 Gm10540-201ENSMUST00000097581 276 ntBASIC6.31□□□□□ -1.4
Nup88Q8CEC0 Olfr201-201ENSMUST00000099656 927 ntAPPRIS P1 BASIC6.31□□□□□ -1.4
Nup88Q8CEC0 Gm5662-201ENSMUST00000101168 1840 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
Nup88Q8CEC0 Pja2-203ENSMUST00000172733 4488 ntAPPRIS ALT2 TSL 1 (best) BASIC6.31□□□□□ -1.4
Nup88Q8CEC0 B130006D01Rik-201ENSMUST00000100534 3124 ntAPPRIS P1 BASIC6.31□□□□□ -1.4
Nup88Q8CEC0 Nipal1-201ENSMUST00000087212 4206 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
Nup88Q8CEC0 Olfr979-202ENSMUST00000215523 3397 ntAPPRIS P1 TSL 5 BASIC6.31□□□□□ -1.4
Nup88Q8CEC0 Btbd35f14-201ENSMUST00000105117 1701 ntAPPRIS P1 BASIC6.3□□□□□ -1.4
Nup88Q8CEC0 Olfr518-202ENSMUST00000217803 2994 ntAPPRIS P1 TSL 5 BASIC6.3□□□□□ -1.4
Nup88Q8CEC0 Gm13648-201ENSMUST00000138361 1536 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
Nup88Q8CEC0 Olfr1444-202ENSMUST00000213606 1872 ntAPPRIS P1 TSL 5 BASIC6.3□□□□□ -1.4
Nup88Q8CEC0 Zfand6-201ENSMUST00000069537 1658 ntAPPRIS P1 TSL 1 (best) BASIC6.3□□□□□ -1.4
Nup88Q8CEC0 Nxf2-201ENSMUST00000010085 2393 ntAPPRIS ALT2 TSL 1 (best) BASIC6.3□□□□□ -1.4
Nup88Q8CEC0 Olfr479-203ENSMUST00000214599 3248 ntAPPRIS P1 TSL 5 BASIC6.3□□□□□ -1.4
Nup88Q8CEC0 9230019H11Rik-201ENSMUST00000095874 2801 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
Nup88Q8CEC0 Gm15490-201ENSMUST00000119894 387 ntBASIC6.3□□□□□ -1.4
Nup88Q8CEC0 Gm15428-201ENSMUST00000121352 333 ntBASIC6.3□□□□□ -1.4
Nup88Q8CEC0 Gm7879-201ENSMUST00000122204 774 ntAPPRIS P1 BASIC6.3□□□□□ -1.4
Nup88Q8CEC0 Gm13738-201ENSMUST00000122437 469 ntBASIC6.3□□□□□ -1.4
Nup88Q8CEC0 Gm12514-202ENSMUST00000150455 699 ntTSL 5 BASIC6.3□□□□□ -1.4
Nup88Q8CEC0 Gm15790-201ENSMUST00000161109 1251 ntBASIC6.3□□□□□ -1.4
Nup88Q8CEC0 Gm8480-201ENSMUST00000190350 698 ntBASIC6.3□□□□□ -1.4
Nup88Q8CEC0 1700084F23Rik-205ENSMUST00000191362 743 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
Nup88Q8CEC0 Gm37700-201ENSMUST00000192617 965 ntBASIC6.3□□□□□ -1.4
Nup88Q8CEC0 Igkv15-101-201ENSMUST00000195917 299 ntBASIC6.3□□□□□ -1.4
Nup88Q8CEC0 Gm44456-201ENSMUST00000196554 89 ntBASIC6.3□□□□□ -1.4
Nup88Q8CEC0 Gm29755-201ENSMUST00000196976 948 ntBASIC6.3□□□□□ -1.4
Nup88Q8CEC0 Mir6994-201ENSMUST00000198985 73 ntBASIC6.3□□□□□ -1.4
Nup88Q8CEC0 1700065J11Rik-201ENSMUST00000201560 424 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
Nup88Q8CEC0 Gm43893-201ENSMUST00000203362 437 ntTSL 3 BASIC6.3□□□□□ -1.4
Nup88Q8CEC0 Gm44110-201ENSMUST00000203871 475 ntTSL 2 BASIC6.3□□□□□ -1.4
Nup88Q8CEC0 AC171206.1-201ENSMUST00000213612 213 ntBASIC6.3□□□□□ -1.4
Nup88Q8CEC0 Olfr915-201ENSMUST00000215191 933 ntAPPRIS P1 BASIC6.3□□□□□ -1.4
Nup88Q8CEC0 AC164576.1-201ENSMUST00000218783 693 ntTSL 5 BASIC6.3□□□□□ -1.4
Nup88Q8CEC0 AC124356.2-201ENSMUST00000221874 336 ntBASIC6.3□□□□□ -1.4
Nup88Q8CEC0 AL807824.1-201ENSMUST00000223151 183 ntBASIC6.3□□□□□ -1.4
Nup88Q8CEC0 AC080021.1-201ENSMUST00000228104 700 ntBASIC6.3□□□□□ -1.4
Nup88Q8CEC0 Sprr2d-201ENSMUST00000047477 681 ntAPPRIS P1 TSL 1 (best) BASIC6.3□□□□□ -1.4
Nup88Q8CEC0 Olfr371-201ENSMUST00000070849 939 ntAPPRIS P1 BASIC6.3□□□□□ -1.4
Nup88Q8CEC0 Olfr1503-ps1-201ENSMUST00000076614 803 ntBASIC6.3□□□□□ -1.4
Nup88Q8CEC0 Mir365-2-201ENSMUST00000083555 112 ntBASIC6.3□□□□□ -1.4
Nup88Q8CEC0 Gm156-201ENSMUST00000095409 682 ntAPPRIS P1 TSL 1 (best) BASIC6.3□□□□□ -1.4
Nup88Q8CEC0 Defa36-201ENSMUST00000095424 420 ntAPPRIS P1 TSL 1 (best) BASIC6.3□□□□□ -1.4
Nup88Q8CEC0 Zfp763-201ENSMUST00000087654 3407 ntAPPRIS P1 TSL 1 (best) BASIC6.3□□□□□ -1.4
Nup88Q8CEC0 Olfr1262-202ENSMUST00000111508 6068 ntAPPRIS P1 TSL 2 BASIC6.3□□□□□ -1.4
Nup88Q8CEC0 Ncoa7-202ENSMUST00000092610 2590 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
Nup88Q8CEC0 Gpr65-201ENSMUST00000075072 2069 ntAPPRIS P1 TSL 1 (best) BASIC6.3□□□□□ -1.4
Nup88Q8CEC0 Hmcn1-202ENSMUST00000137197 16554 ntTSL 5 BASIC6.3□□□□□ -1.4
Nup88Q8CEC0 Ptprq-201ENSMUST00000050702 7393 ntAPPRIS P1 TSL 2 BASIC6.3□□□□□ -1.4
Nup88Q8CEC0 Gm37485-201ENSMUST00000192326 2953 ntBASIC6.3□□□□□ -1.4
Nup88Q8CEC0 Pum2-210ENSMUST00000169089 3295 ntAPPRIS ALT2 TSL 5 BASIC6.3□□□□□ -1.4
Nup88Q8CEC0 Cnot4-207ENSMUST00000202417 3296 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
Nup88Q8CEC0 Gm44751-201ENSMUST00000208302 4387 ntBASIC6.29□□□□□ -1.4
Nup88Q8CEC0 Vmn1r61-201ENSMUST00000164880 1818 ntAPPRIS P1 BASIC6.29□□□□□ -1.4
Nup88Q8CEC0 Gm9923-201ENSMUST00000217785 1836 ntBASIC6.29□□□□□ -1.4
Nup88Q8CEC0 Olfr586-204ENSMUST00000215304 6169 ntAPPRIS ALT2 TSL 5 BASIC6.29□□□□□ -1.4
Nup88Q8CEC0 Vmn1r71-210ENSMUST00000228561 4747 ntAPPRIS ALT2 BASIC6.29□□□□□ -1.4
Nup88Q8CEC0 Vmn1r218-203ENSMUST00000227050 10364 ntAPPRIS P2 BASIC6.29□□□□□ -1.4
Nup88Q8CEC0 Prl8a2-202ENSMUST00000110363 922 ntAPPRIS ALT2 TSL 1 (best) BASIC6.29□□□□□ -1.4
Nup88Q8CEC0 Gm13838-201ENSMUST00000132130 531 ntTSL 5 BASIC6.29□□□□□ -1.4
Nup88Q8CEC0 Gm11636-201ENSMUST00000152172 774 ntTSL 2 BASIC6.29□□□□□ -1.4
Nup88Q8CEC0 Gm23116-201ENSMUST00000158481 67 ntBASIC6.29□□□□□ -1.4
Nup88Q8CEC0 Gm15810-201ENSMUST00000160241 681 ntTSL 3 BASIC6.29□□□□□ -1.4
Nup88Q8CEC0 Mir3090-201ENSMUST00000175597 87 ntBASIC6.29□□□□□ -1.4
Nup88Q8CEC0 Gm4221-201ENSMUST00000181538 1232 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
Nup88Q8CEC0 C920009B18Rik-203ENSMUST00000181643 1004 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
Nup88Q8CEC0 Prl8a2-201ENSMUST00000018403 939 ntAPPRIS P3 TSL 1 (best) BASIC6.29□□□□□ -1.4
Retrieved 100 of 76,532 protein–RNA pairs in 85.4 ms