Protein–RNA interactions for Protein: Q8C0D0

Trub1, Probable tRNA pseudouridine synthase 1, mousemouse

Known RBP Predictions only

Length 338 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trub1Q8C0D0 Fat1-203ENSMUST00000189017 14651 ntTSL 5 BASIC5.36□□□□□ -1.55
Trub1Q8C0D0 Vmn1r209-203ENSMUST00000227265 6550 ntAPPRIS P1 BASIC5.36□□□□□ -1.55
Trub1Q8C0D0 Zscan4-ps2-201ENSMUST00000091440 2277 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
Trub1Q8C0D0 Olfr874-202ENSMUST00000216982 2632 ntAPPRIS P1 TSL 5 BASIC5.36□□□□□ -1.55
Trub1Q8C0D0 Dleu2-202ENSMUST00000180917 3544 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
Trub1Q8C0D0 Trim30b-201ENSMUST00000106831 4287 ntAPPRIS ALT2 TSL 1 (best) BASIC5.36□□□□□ -1.55
Trub1Q8C0D0 Wnk3-206ENSMUST00000184730 5253 ntAPPRIS ALT2 TSL 1 (best) BASIC5.36□□□□□ -1.55
Trub1Q8C0D0 Epha3-201ENSMUST00000064405 5659 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
Trub1Q8C0D0 Flrt2-201ENSMUST00000057324 7099 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
Trub1Q8C0D0 Gramd1c-201ENSMUST00000036174 3501 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
Trub1Q8C0D0 Ceacam5-201ENSMUST00000081907 3273 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
Trub1Q8C0D0 A230057D06Rik-201ENSMUST00000208961 3026 ntTSL 5 BASIC5.35□□□□□ -1.55
Trub1Q8C0D0 Glb1l3-201ENSMUST00000034448 2468 ntAPPRIS ALT2 TSL 5 BASIC5.35□□□□□ -1.55
Trub1Q8C0D0 Il6-203ENSMUST00000199183 2343 ntTSL 2 BASIC5.35□□□□□ -1.55
Trub1Q8C0D0 Gm16070-202ENSMUST00000149914 2146 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
Trub1Q8C0D0 Rev3l-207ENSMUST00000164763 10399 ntAPPRIS P1 TSL 5 BASIC5.35□□□□□ -1.55
Trub1Q8C0D0 Cylc1-202ENSMUST00000210720 1969 ntAPPRIS ALT2 TSL 5 BASIC5.35□□□□□ -1.55
Trub1Q8C0D0 Gm24429-201ENSMUST00000104076 132 ntBASIC5.35□□□□□ -1.55
Trub1Q8C0D0 Mir292-201ENSMUST00000104847 82 ntBASIC5.35□□□□□ -1.55
Trub1Q8C0D0 Gm15772-201ENSMUST00000118533 438 ntBASIC5.35□□□□□ -1.55
Trub1Q8C0D0 Gm15791-201ENSMUST00000120365 319 ntBASIC5.35□□□□□ -1.55
Trub1Q8C0D0 Gm15194-201ENSMUST00000120453 434 ntBASIC5.35□□□□□ -1.55
Trub1Q8C0D0 Gm15787-203ENSMUST00000130892 1250 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
Trub1Q8C0D0 Gm5699-201ENSMUST00000152491 723 ntBASIC5.35□□□□□ -1.55
Trub1Q8C0D0 4933417A18Rik-201ENSMUST00000160279 1045 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
Trub1Q8C0D0 1700101I11Rik-201ENSMUST00000181594 896 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
Trub1Q8C0D0 Gm28429-201ENSMUST00000188521 363 ntBASIC5.35□□□□□ -1.55
Trub1Q8C0D0 Gm7496-201ENSMUST00000192573 1034 ntBASIC5.35□□□□□ -1.55
Trub1Q8C0D0 Gm19231-201ENSMUST00000193212 830 ntBASIC5.35□□□□□ -1.55
Trub1Q8C0D0 Gm36548-201ENSMUST00000197473 685 ntTSL 5 BASIC5.35□□□□□ -1.55
Trub1Q8C0D0 Gm33952-201ENSMUST00000197795 408 ntBASIC5.35□□□□□ -1.55
Trub1Q8C0D0 Gm42542-201ENSMUST00000197978 268 ntBASIC5.35□□□□□ -1.55
Trub1Q8C0D0 E230029C05Rik-206ENSMUST00000208547 814 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
Trub1Q8C0D0 Gm45422-201ENSMUST00000211476 246 ntBASIC5.35□□□□□ -1.55
Trub1Q8C0D0 4933411E02Rik-201ENSMUST00000216779 1030 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
Trub1Q8C0D0 AC127337.1-201ENSMUST00000220423 625 ntTSL 2 BASIC5.35□□□□□ -1.55
Trub1Q8C0D0 AC107757.1-201ENSMUST00000226780 357 ntBASIC5.35□□□□□ -1.55
Trub1Q8C0D0 AC160120.1-201ENSMUST00000227446 663 ntBASIC5.35□□□□□ -1.55
Trub1Q8C0D0 AC157572.4-201ENSMUST00000228203 549 ntBASIC5.35□□□□□ -1.55
Trub1Q8C0D0 AC154806.5-205ENSMUST00000228828 411 ntBASIC5.35□□□□□ -1.55
Trub1Q8C0D0 Mlip-201ENSMUST00000034910 1227 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
Trub1Q8C0D0 Olfr599-201ENSMUST00000098201 1050 ntAPPRIS P1 BASIC5.35□□□□□ -1.55
Trub1Q8C0D0 Mdn1-211ENSMUST00000178134 17959 ntAPPRIS P2 TSL 5 BASIC5.35□□□□□ -1.55
Trub1Q8C0D0 Olfr1443-201ENSMUST00000049724 4343 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
Trub1Q8C0D0 Gprc6a-202ENSMUST00000218684 2292 ntAPPRIS ALT2 TSL 1 (best) BASIC5.35□□□□□ -1.55
Trub1Q8C0D0 Gm45222-201ENSMUST00000207029 4307 ntBASIC5.34□□□□□ -1.55
Trub1Q8C0D0 AC115910.1-201ENSMUST00000221188 4275 ntBASIC5.34□□□□□ -1.55
Trub1Q8C0D0 Gm3383-202ENSMUST00000112758 1813 ntAPPRIS P5 TSL 5 BASIC5.34□□□□□ -1.55
Trub1Q8C0D0 Gm3194-202ENSMUST00000180867 1813 ntAPPRIS P5 TSL 5 BASIC5.34□□□□□ -1.55
Trub1Q8C0D0 Polk-201ENSMUST00000022172 4225 ntAPPRIS P2 TSL 1 (best) BASIC5.34□□□□□ -1.55
Trub1Q8C0D0 Nipal1-201ENSMUST00000087212 4206 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
Trub1Q8C0D0 Tsga10-207ENSMUST00000155852 2861 ntAPPRIS ALT2 TSL 1 (best) BASIC5.34□□□□□ -1.55
Trub1Q8C0D0 Tinag-201ENSMUST00000034911 1726 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
Trub1Q8C0D0 Gm20707-201ENSMUST00000176201 2516 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
Trub1Q8C0D0 Gm6853-202ENSMUST00000211360 4375 ntTSL 5 BASIC5.34□□□□□ -1.55
Trub1Q8C0D0 AC144772.1-201ENSMUST00000226372 2398 ntBASIC5.34□□□□□ -1.55
Trub1Q8C0D0 Olfr535-203ENSMUST00000213715 5033 ntAPPRIS P1 TSL 5 BASIC5.34□□□□□ -1.55
Trub1Q8C0D0 Pkhd1-201ENSMUST00000088448 12935 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
Trub1Q8C0D0 Gm22468-201ENSMUST00000116680 120 ntBASIC5.34□□□□□ -1.55
Trub1Q8C0D0 Gm26248-201ENSMUST00000116700 121 ntBASIC5.34□□□□□ -1.55
Trub1Q8C0D0 Gm26137-201ENSMUST00000116701 121 ntBASIC5.34□□□□□ -1.55
Trub1Q8C0D0 Gm26190-201ENSMUST00000116704 121 ntBASIC5.34□□□□□ -1.55
Trub1Q8C0D0 Gm24617-201ENSMUST00000116705 121 ntBASIC5.34□□□□□ -1.55
Trub1Q8C0D0 Gm25778-201ENSMUST00000116713 121 ntBASIC5.34□□□□□ -1.55
Trub1Q8C0D0 Gm25774-201ENSMUST00000116717 121 ntBASIC5.34□□□□□ -1.55
Trub1Q8C0D0 Gm22102-201ENSMUST00000116730 121 ntBASIC5.34□□□□□ -1.55
Trub1Q8C0D0 Gm23177-201ENSMUST00000116784 121 ntBASIC5.34□□□□□ -1.55
Trub1Q8C0D0 Gm24193-201ENSMUST00000116801 121 ntBASIC5.34□□□□□ -1.55
Trub1Q8C0D0 Gm24744-201ENSMUST00000116833 121 ntBASIC5.34□□□□□ -1.55
Trub1Q8C0D0 Gm24427-201ENSMUST00000116896 121 ntBASIC5.34□□□□□ -1.55
Trub1Q8C0D0 Gm22346-201ENSMUST00000116918 121 ntBASIC5.34□□□□□ -1.55
Trub1Q8C0D0 Gm23606-201ENSMUST00000116938 121 ntBASIC5.34□□□□□ -1.55
Trub1Q8C0D0 Gm22029-201ENSMUST00000116940 121 ntBASIC5.34□□□□□ -1.55
Trub1Q8C0D0 Gm26298-201ENSMUST00000116956 121 ntBASIC5.34□□□□□ -1.55
Trub1Q8C0D0 Gm23844-201ENSMUST00000116959 121 ntBASIC5.34□□□□□ -1.55
Trub1Q8C0D0 Gm24484-201ENSMUST00000117009 121 ntBASIC5.34□□□□□ -1.55
Trub1Q8C0D0 Gm25347-201ENSMUST00000117026 121 ntBASIC5.34□□□□□ -1.55
Trub1Q8C0D0 Gm22112-201ENSMUST00000117032 121 ntBASIC5.34□□□□□ -1.55
Trub1Q8C0D0 Gm7206-201ENSMUST00000117730 508 ntBASIC5.34□□□□□ -1.55
Trub1Q8C0D0 Mup12-201ENSMUST00000117932 926 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
Trub1Q8C0D0 Gm8595-201ENSMUST00000118250 630 ntBASIC5.34□□□□□ -1.55
Trub1Q8C0D0 Gm13679-201ENSMUST00000118678 484 ntBASIC5.34□□□□□ -1.55
Trub1Q8C0D0 Mup-ps28-201ENSMUST00000120686 289 ntBASIC5.34□□□□□ -1.55
Trub1Q8C0D0 Gm15388-201ENSMUST00000121578 726 ntBASIC5.34□□□□□ -1.55
Trub1Q8C0D0 Gm23837-201ENSMUST00000122656 286 ntBASIC5.34□□□□□ -1.55
Trub1Q8C0D0 St8sia3os-201ENSMUST00000123473 652 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
Trub1Q8C0D0 3110004A20Rik-201ENSMUST00000123904 385 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
Trub1Q8C0D0 Prlr-212ENSMUST00000148257 1190 ntAPPRIS ALT2 TSL 5 BASIC5.34□□□□□ -1.55
Trub1Q8C0D0 Gm25342-201ENSMUST00000157459 122 ntBASIC5.34□□□□□ -1.55
Trub1Q8C0D0 Gm24216-201ENSMUST00000158259 117 ntBASIC5.34□□□□□ -1.55
Trub1Q8C0D0 Gm25907-201ENSMUST00000158486 125 ntBASIC5.34□□□□□ -1.55
Trub1Q8C0D0 Mir1963-201ENSMUST00000158594 59 ntBASIC5.34□□□□□ -1.55
Trub1Q8C0D0 Gm2012-202ENSMUST00000163263 892 ntAPPRIS P1 TSL 5 BASIC5.34□□□□□ -1.55
Trub1Q8C0D0 Gm7316-201ENSMUST00000165395 445 ntBASIC5.34□□□□□ -1.55
Trub1Q8C0D0 Gm6121-202ENSMUST00000167438 893 ntAPPRIS P1 TSL 5 BASIC5.34□□□□□ -1.55
Trub1Q8C0D0 Gm20401-201ENSMUST00000173717 212 ntBASIC5.34□□□□□ -1.55
Trub1Q8C0D0 Gm22991-201ENSMUST00000178126 121 ntBASIC5.34□□□□□ -1.55
Trub1Q8C0D0 Gm25754-201ENSMUST00000178653 121 ntBASIC5.34□□□□□ -1.55
Trub1Q8C0D0 Gm22419-201ENSMUST00000178780 121 ntBASIC5.34□□□□□ -1.55
Trub1Q8C0D0 Gm24802-201ENSMUST00000178897 121 ntBASIC5.34□□□□□ -1.55
Retrieved 100 of 76,532 protein–RNA pairs in 60.6 ms