Protein–RNA interactions for Protein: Q8BJF9

Chmp2b, Charged multivesicular body protein 2b, mousemouse

Predictions only

Length 213 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp2bQ8BJF9 Clca3a1-202ENSMUST00000059091 3524 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
Chmp2bQ8BJF9 Vmn1r173-202ENSMUST00000226233 9416 ntAPPRIS P1 BASIC5.5□□□□□ -1.53
Chmp2bQ8BJF9 AC153494.1-201ENSMUST00000218664 3041 ntBASIC5.5□□□□□ -1.53
Chmp2bQ8BJF9 Vmn1r171-209ENSMUST00000228228 2863 ntAPPRIS ALT2 BASIC5.49□□□□□ -1.53
Chmp2bQ8BJF9 Ms4a13-202ENSMUST00000188464 1301 ntAPPRIS ALT2 TSL 1 (best) BASIC5.49□□□□□ -1.53
Chmp2bQ8BJF9 Il12rb2-202ENSMUST00000117441 2600 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
Chmp2bQ8BJF9 Gm45149-201ENSMUST00000206459 2172 ntBASIC5.49□□□□□ -1.53
Chmp2bQ8BJF9 Gcnt3-201ENSMUST00000034751 4301 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
Chmp2bQ8BJF9 B530045E10Rik-202ENSMUST00000189035 3138 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
Chmp2bQ8BJF9 Olfr376-203ENSMUST00000170592 3211 ntAPPRIS P3 TSL 2 BASIC5.49□□□□□ -1.53
Chmp2bQ8BJF9 Trps1-202ENSMUST00000165201 9859 ntAPPRIS P3 TSL 1 (best) BASIC5.49□□□□□ -1.53
Chmp2bQ8BJF9 Btbd35f21-201ENSMUST00000105017 1943 ntAPPRIS P1 BASIC5.49□□□□□ -1.53
Chmp2bQ8BJF9 Btbd35f27-201ENSMUST00000178143 1943 ntAPPRIS P1 BASIC5.49□□□□□ -1.53
Chmp2bQ8BJF9 Btbd35f2-201ENSMUST00000179991 1949 ntAPPRIS P1 BASIC5.49□□□□□ -1.53
Chmp2bQ8BJF9 Btbd35f16-201ENSMUST00000185755 1949 ntAPPRIS P1 BASIC5.49□□□□□ -1.53
Chmp2bQ8BJF9 Nlgn1-202ENSMUST00000108308 4272 ntAPPRIS ALT2 TSL 5 BASIC5.49□□□□□ -1.53
Chmp2bQ8BJF9 Gm21637-201ENSMUST00000105124 778 ntAPPRIS P1 BASIC5.49□□□□□ -1.53
Chmp2bQ8BJF9 4930402F06Rik-201ENSMUST00000113009 1150 ntAPPRIS ALT2 TSL 1 (best) BASIC5.49□□□□□ -1.53
Chmp2bQ8BJF9 Gm14744-201ENSMUST00000114039 800 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
Chmp2bQ8BJF9 Olfr260-ps1-201ENSMUST00000117279 822 ntBASIC5.49□□□□□ -1.53
Chmp2bQ8BJF9 Vmn1r-ps95-201ENSMUST00000118641 903 ntBASIC5.49□□□□□ -1.53
Chmp2bQ8BJF9 Gm14985-201ENSMUST00000118693 786 ntBASIC5.49□□□□□ -1.53
Chmp2bQ8BJF9 Gm15044-201ENSMUST00000120703 598 ntBASIC5.49□□□□□ -1.53
Chmp2bQ8BJF9 Gm15022-201ENSMUST00000122074 746 ntBASIC5.49□□□□□ -1.53
Chmp2bQ8BJF9 Gm22588-201ENSMUST00000157510 140 ntBASIC5.49□□□□□ -1.53
Chmp2bQ8BJF9 Gm26350-201ENSMUST00000157531 288 ntBASIC5.49□□□□□ -1.53
Chmp2bQ8BJF9 Gm24957-201ENSMUST00000179604 132 ntBASIC5.49□□□□□ -1.53
Chmp2bQ8BJF9 Gm8298-201ENSMUST00000179799 1206 ntAPPRIS P1 TSL 5 BASIC5.49□□□□□ -1.53
Chmp2bQ8BJF9 Klrb1-ps1-201ENSMUST00000184388 701 ntBASIC5.49□□□□□ -1.53
Chmp2bQ8BJF9 Gm28238-201ENSMUST00000188102 383 ntTSL 5 BASIC5.49□□□□□ -1.53
Chmp2bQ8BJF9 Gm21803-201ENSMUST00000188897 693 ntBASIC5.49□□□□□ -1.53
Chmp2bQ8BJF9 Gm28883-201ENSMUST00000189256 369 ntBASIC5.49□□□□□ -1.53
Chmp2bQ8BJF9 Gm29036-201ENSMUST00000189967 877 ntBASIC5.49□□□□□ -1.53
Chmp2bQ8BJF9 Gm28567-201ENSMUST00000190270 693 ntBASIC5.49□□□□□ -1.53
Chmp2bQ8BJF9 Gm28640-201ENSMUST00000190918 550 ntBASIC5.49□□□□□ -1.53
Chmp2bQ8BJF9 1700031M16Rik-206ENSMUST00000191037 711 ntAPPRIS P5 TSL 3 BASIC5.49□□□□□ -1.53
Chmp2bQ8BJF9 2610509F24Rik-201ENSMUST00000193035 838 ntBASIC5.49□□□□□ -1.53
Chmp2bQ8BJF9 Gm37044-201ENSMUST00000193531 693 ntBASIC5.49□□□□□ -1.53
Chmp2bQ8BJF9 Gm38369-201ENSMUST00000195101 693 ntBASIC5.49□□□□□ -1.53
Chmp2bQ8BJF9 Gm2142-201ENSMUST00000197899 589 ntBASIC5.49□□□□□ -1.53
Chmp2bQ8BJF9 Gm8953-201ENSMUST00000198497 904 ntTSL 5 BASIC5.49□□□□□ -1.53
Chmp2bQ8BJF9 Tprkb-208ENSMUST00000200680 814 ntAPPRIS P1 TSL 3 BASIC5.49□□□□□ -1.53
Chmp2bQ8BJF9 Gm45075-201ENSMUST00000208426 649 ntTSL 3 BASIC5.49□□□□□ -1.53
Chmp2bQ8BJF9 CAAA01216754.4-201ENSMUST00000216416 802 ntTSL 5 BASIC5.49□□□□□ -1.53
Chmp2bQ8BJF9 Olfr1420-203ENSMUST00000217281 2998 ntAPPRIS P1 TSL 5 BASIC5.49□□□□□ -1.53
Chmp2bQ8BJF9 4933412O06Rik-201ENSMUST00000222681 1123 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
Chmp2bQ8BJF9 Gm36607-201ENSMUST00000222750 1087 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
Chmp2bQ8BJF9 Elk3-205ENSMUST00000223340 750 ntTSL 5 BASIC5.49□□□□□ -1.53
Chmp2bQ8BJF9 AC152169.2-201ENSMUST00000224558 613 ntBASIC5.49□□□□□ -1.53
Chmp2bQ8BJF9 AC137871.3-201ENSMUST00000226628 225 ntBASIC5.49□□□□□ -1.53
Chmp2bQ8BJF9 AC154730.1-201ENSMUST00000227874 816 ntBASIC5.49□□□□□ -1.53
Chmp2bQ8BJF9 Carf-201ENSMUST00000027171 2102 ntAPPRIS ALT2 TSL 1 (best) BASIC5.49□□□□□ -1.53
Chmp2bQ8BJF9 Ppih-201ENSMUST00000056458 757 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
Chmp2bQ8BJF9 Bcl2l15-201ENSMUST00000062945 833 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
Chmp2bQ8BJF9 Gm6195-201ENSMUST00000063059 357 ntBASIC5.49□□□□□ -1.53
Chmp2bQ8BJF9 Olfr684-203ENSMUST00000215744 3084 ntAPPRIS P1 TSL 5 BASIC5.49□□□□□ -1.53
Chmp2bQ8BJF9 Olfr698-204ENSMUST00000216255 4024 ntAPPRIS P1 TSL 5 BASIC5.49□□□□□ -1.53
Chmp2bQ8BJF9 Gm37875-201ENSMUST00000192101 1498 ntTSL 5 BASIC5.49□□□□□ -1.53
Chmp2bQ8BJF9 Cpb2-201ENSMUST00000022576 1477 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
Chmp2bQ8BJF9 Pfkfb2-202ENSMUST00000066863 4425 ntAPPRIS P3 TSL 1 (best) BASIC5.49□□□□□ -1.53
Chmp2bQ8BJF9 Olfr303-203ENSMUST00000215532 3572 ntAPPRIS P1 TSL 5 BASIC5.49□□□□□ -1.53
Chmp2bQ8BJF9 Olfr893-202ENSMUST00000211975 2924 ntAPPRIS ALT2 TSL 5 BASIC5.49□□□□□ -1.53
Chmp2bQ8BJF9 Slco1b2-201ENSMUST00000042812 3307 ntAPPRIS P2 TSL 1 (best) BASIC5.49□□□□□ -1.53
Chmp2bQ8BJF9 Clec4a2-202ENSMUST00000041779 2481 ntAPPRIS P3 TSL 1 (best) BASIC5.49□□□□□ -1.53
Chmp2bQ8BJF9 Crebrf-201ENSMUST00000062519 7462 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
Chmp2bQ8BJF9 Gm42600-201ENSMUST00000202081 3588 ntBASIC5.49□□□□□ -1.53
Chmp2bQ8BJF9 A530030E21Rik-201ENSMUST00000199551 1310 ntBASIC5.48□□□□□ -1.53
Chmp2bQ8BJF9 Gm6503-201ENSMUST00000210829 2225 ntBASIC5.48□□□□□ -1.53
Chmp2bQ8BJF9 Gm43175-201ENSMUST00000198450 3810 ntBASIC5.48□□□□□ -1.53
Chmp2bQ8BJF9 Gm14296-201ENSMUST00000099007 3823 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
Chmp2bQ8BJF9 2210418O10Rik-201ENSMUST00000099009 3823 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
Chmp2bQ8BJF9 Zfp120-203ENSMUST00000109931 4033 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
Chmp2bQ8BJF9 Olfr767-202ENSMUST00000213579 5493 ntAPPRIS P1 TSL 5 BASIC5.48□□□□□ -1.53
Chmp2bQ8BJF9 Gm37854-201ENSMUST00000192149 1463 ntTSL 5 BASIC5.48□□□□□ -1.53
Chmp2bQ8BJF9 Gm22372-201ENSMUST00000104589 136 ntBASIC5.48□□□□□ -1.53
Chmp2bQ8BJF9 Gm15293-201ENSMUST00000110754 418 ntAPPRIS P1 TSL 5 BASIC5.48□□□□□ -1.53
Chmp2bQ8BJF9 Cetn2-202ENSMUST00000114550 1124 ntTSL 3 BASIC5.48□□□□□ -1.53
Chmp2bQ8BJF9 Gm14308-202ENSMUST00000117267 777 ntTSL 3 BASIC5.48□□□□□ -1.53
Chmp2bQ8BJF9 Gm14769-201ENSMUST00000118590 432 ntBASIC5.48□□□□□ -1.53
Chmp2bQ8BJF9 Gm11533-201ENSMUST00000120287 477 ntBASIC5.48□□□□□ -1.53
Chmp2bQ8BJF9 Gm11415-201ENSMUST00000128214 480 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
Chmp2bQ8BJF9 Gm14095-201ENSMUST00000134264 516 ntTSL 3 BASIC5.48□□□□□ -1.53
Chmp2bQ8BJF9 Gm23673-201ENSMUST00000157474 298 ntBASIC5.48□□□□□ -1.53
Chmp2bQ8BJF9 Gm16139-201ENSMUST00000160015 420 ntBASIC5.48□□□□□ -1.53
Chmp2bQ8BJF9 Gm22411-201ENSMUST00000175462 126 ntBASIC5.48□□□□□ -1.53
Chmp2bQ8BJF9 Gm22002-201ENSMUST00000175622 125 ntBASIC5.48□□□□□ -1.53
Chmp2bQ8BJF9 Gm26554-201ENSMUST00000180801 845 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
Chmp2bQ8BJF9 Gm27030-201ENSMUST00000182551 464 ntBASIC5.48□□□□□ -1.53
Chmp2bQ8BJF9 1810053B23Rik-201ENSMUST00000185242 634 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
Chmp2bQ8BJF9 Gm29289-201ENSMUST00000188358 576 ntAPPRIS P1 TSL 5 BASIC5.48□□□□□ -1.53
Chmp2bQ8BJF9 Gm37741-201ENSMUST00000191768 1256 ntBASIC5.48□□□□□ -1.53
Chmp2bQ8BJF9 Gm36638-201ENSMUST00000193295 400 ntBASIC5.48□□□□□ -1.53
Chmp2bQ8BJF9 Gm43033-201ENSMUST00000199682 425 ntBASIC5.48□□□□□ -1.53
Chmp2bQ8BJF9 Gm4374-201ENSMUST00000204929 424 ntBASIC5.48□□□□□ -1.53
Chmp2bQ8BJF9 Gm34096-201ENSMUST00000211296 530 ntTSL 3 BASIC5.48□□□□□ -1.53
Chmp2bQ8BJF9 Gm33242-201ENSMUST00000212130 1057 ntBASIC5.48□□□□□ -1.53
Chmp2bQ8BJF9 Gm10709-201ENSMUST00000213318 480 ntBASIC5.48□□□□□ -1.53
Chmp2bQ8BJF9 9530050K03Rik-201ENSMUST00000221663 1299 ntBASIC5.48□□□□□ -1.53
Chmp2bQ8BJF9 CT030238.4-203ENSMUST00000227343 836 ntBASIC5.48□□□□□ -1.53
Chmp2bQ8BJF9 Spcs1-206ENSMUST00000228736 702 ntAPPRIS P1 BASIC5.48□□□□□ -1.53
Retrieved 100 of 76,532 protein–RNA pairs in 82.2 ms