Protein–RNA interactions for Protein: Q8BI79

Ccdc40, Coiled-coil domain-containing protein 40, mousemouse

Predictions only

Length 1,192 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc40Q8BI79 4930444F02Rik-201ENSMUST00000215429 6871 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
Ccdc40Q8BI79 Gm37834-201ENSMUST00000194517 3035 ntBASIC5.7□□□□□ -1.5
Ccdc40Q8BI79 Slc6a15-201ENSMUST00000074204 3607 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
Ccdc40Q8BI79 Olfr877-202ENSMUST00000213956 2761 ntAPPRIS P1 TSL 5 BASIC5.7□□□□□ -1.5
Ccdc40Q8BI79 St18-213ENSMUST00000163727 5604 ntAPPRIS P1 TSL 5 BASIC5.7□□□□□ -1.5
Ccdc40Q8BI79 Gm44535-201ENSMUST00000208889 3136 ntBASIC5.7□□□□□ -1.5
Ccdc40Q8BI79 AC153494.1-201ENSMUST00000218664 3041 ntBASIC5.69□□□□□ -1.5
Ccdc40Q8BI79 Lipm-201ENSMUST00000025685 2701 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
Ccdc40Q8BI79 Olfr1115-204ENSMUST00000217196 2109 ntAPPRIS P1 TSL 3 BASIC5.69□□□□□ -1.5
Ccdc40Q8BI79 Gm13078-201ENSMUST00000078695 2106 ntAPPRIS P1 TSL 5 BASIC5.69□□□□□ -1.5
Ccdc40Q8BI79 Ttn-202ENSMUST00000099980 16891 ntTSL 5 BASIC5.69□□□□□ -1.5
Ccdc40Q8BI79 Tmem45a2-201ENSMUST00000067173 3073 ntAPPRIS P1 TSL 2 BASIC5.69□□□□□ -1.5
Ccdc40Q8BI79 Vmn1r204-202ENSMUST00000228195 2936 ntAPPRIS P1 BASIC5.69□□□□□ -1.5
Ccdc40Q8BI79 Gm37686-201ENSMUST00000194099 2309 ntBASIC5.69□□□□□ -1.5
Ccdc40Q8BI79 Slfn14-201ENSMUST00000163961 3706 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
Ccdc40Q8BI79 Gm42662-201ENSMUST00000202539 1431 ntBASIC5.69□□□□□ -1.5
Ccdc40Q8BI79 Olfr198-202ENSMUST00000208244 2200 ntAPPRIS P1 TSL 2 BASIC5.69□□□□□ -1.5
Ccdc40Q8BI79 Olfr183-203ENSMUST00000213465 2200 ntAPPRIS P1 TSL 5 BASIC5.69□□□□□ -1.5
Ccdc40Q8BI79 Olfr183-205ENSMUST00000214916 2249 ntAPPRIS P1 TSL 5 BASIC5.69□□□□□ -1.5
Ccdc40Q8BI79 Cetn2-202ENSMUST00000114550 1124 ntTSL 3 BASIC5.69□□□□□ -1.5
Ccdc40Q8BI79 Gm15981-201ENSMUST00000119196 457 ntBASIC5.69□□□□□ -1.5
Ccdc40Q8BI79 Gm6175-201ENSMUST00000121351 400 ntBASIC5.69□□□□□ -1.5
Ccdc40Q8BI79 Gm13363-201ENSMUST00000122008 522 ntBASIC5.69□□□□□ -1.5
Ccdc40Q8BI79 Gm6872-201ENSMUST00000165001 700 ntBASIC5.69□□□□□ -1.5
Ccdc40Q8BI79 Rps8-ps1-201ENSMUST00000172445 624 ntBASIC5.69□□□□□ -1.5
Ccdc40Q8BI79 Olfr753-ps1-202ENSMUST00000174673 919 ntBASIC5.69□□□□□ -1.5
Ccdc40Q8BI79 Gm21847-201ENSMUST00000178227 1068 ntTSL 5 BASIC5.69□□□□□ -1.5
Ccdc40Q8BI79 Mir6244-201ENSMUST00000184156 117 ntBASIC5.69□□□□□ -1.5
Ccdc40Q8BI79 2010016I18Rik-203ENSMUST00000189683 841 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
Ccdc40Q8BI79 Gm8419-201ENSMUST00000189886 412 ntBASIC5.69□□□□□ -1.5
Ccdc40Q8BI79 Gm36638-201ENSMUST00000193295 400 ntBASIC5.69□□□□□ -1.5
Ccdc40Q8BI79 1700047N06Rik-201ENSMUST00000194474 920 ntBASIC5.69□□□□□ -1.5
Ccdc40Q8BI79 Gm37719-201ENSMUST00000194615 292 ntBASIC5.69□□□□□ -1.5
Ccdc40Q8BI79 9530003J23Rik-201ENSMUST00000020392 1233 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
Ccdc40Q8BI79 Gm6828-201ENSMUST00000207902 1186 ntBASIC5.69□□□□□ -1.5
Ccdc40Q8BI79 1300002E11Rik-206ENSMUST00000209728 701 ntTSL 2 BASIC5.69□□□□□ -1.5
Ccdc40Q8BI79 Gm39336-201ENSMUST00000214933 260 ntTSL 3 BASIC5.69□□□□□ -1.5
Ccdc40Q8BI79 AC123944.2-201ENSMUST00000215290 382 ntBASIC5.69□□□□□ -1.5
Ccdc40Q8BI79 CT025625.1-201ENSMUST00000217786 460 ntTSL 5 BASIC5.69□□□□□ -1.5
Ccdc40Q8BI79 A330049N07Rik-202ENSMUST00000219920 587 ntTSL 5 BASIC5.69□□□□□ -1.5
Ccdc40Q8BI79 AC124732.4-201ENSMUST00000220930 1274 ntBASIC5.69□□□□□ -1.5
Ccdc40Q8BI79 Gm5087-204ENSMUST00000225820 645 ntBASIC5.69□□□□□ -1.5
Ccdc40Q8BI79 Cetn2-201ENSMUST00000033713 1026 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
Ccdc40Q8BI79 Olfr684-201ENSMUST00000060893 939 ntAPPRIS P1 BASIC5.69□□□□□ -1.5
Ccdc40Q8BI79 A630073D07Rik-201ENSMUST00000091791 484 ntAPPRIS P1 TSL 3 BASIC5.69□□□□□ -1.5
Ccdc40Q8BI79 Olfr1217-201ENSMUST00000099799 1105 ntAPPRIS P1 BASIC5.69□□□□□ -1.5
Ccdc40Q8BI79 Olfr1270-205ENSMUST00000216354 4836 ntAPPRIS P1 TSL 5 BASIC5.69□□□□□ -1.5
Ccdc40Q8BI79 AC103672.3-201ENSMUST00000227649 3243 ntBASIC5.69□□□□□ -1.5
Ccdc40Q8BI79 Gm18954-201ENSMUST00000222200 1792 ntBASIC5.69□□□□□ -1.5
Ccdc40Q8BI79 Olfr459-202ENSMUST00000214752 3715 ntAPPRIS P1 TSL 5 BASIC5.69□□□□□ -1.5
Ccdc40Q8BI79 Gm38101-201ENSMUST00000193484 3557 ntBASIC5.69□□□□□ -1.5
Ccdc40Q8BI79 AC166344.3-203ENSMUST00000228117 1466 ntAPPRIS P1 BASIC5.69□□□□□ -1.5
Ccdc40Q8BI79 Lrrc4c-202ENSMUST00000135431 3646 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
Ccdc40Q8BI79 4930554C24Rik-203ENSMUST00000216802 1346 ntTSL 5 BASIC5.69□□□□□ -1.5
Ccdc40Q8BI79 Eif2s2-205ENSMUST00000166171 2312 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
Ccdc40Q8BI79 Olfr123-202ENSMUST00000214770 2883 ntAPPRIS P1 TSL 5 BASIC5.69□□□□□ -1.5
Ccdc40Q8BI79 Olfr497-202ENSMUST00000213521 2396 ntAPPRIS P1 TSL 3 BASIC5.69□□□□□ -1.5
Ccdc40Q8BI79 Cpa2-201ENSMUST00000096066 1388 ntAPPRIS P1 TSL 5 BASIC5.68□□□□□ -1.5
Ccdc40Q8BI79 Gm20756-202ENSMUST00000201324 1565 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
Ccdc40Q8BI79 Pcsk2os2-201ENSMUST00000153878 3370 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
Ccdc40Q8BI79 Gm8229-201ENSMUST00000168161 1403 ntAPPRIS P1 TSL 5 BASIC5.68□□□□□ -1.5
Ccdc40Q8BI79 Sirpb1b-202ENSMUST00000192382 1437 ntAPPRIS ALT2 TSL 5 BASIC5.68□□□□□ -1.5
Ccdc40Q8BI79 Casp4-201ENSMUST00000027012 1435 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
Ccdc40Q8BI79 Zbtb38-212ENSMUST00000152594 7406 ntAPPRIS P1 TSL 2 BASIC5.68□□□□□ -1.5
Ccdc40Q8BI79 Sub1-202ENSMUST00000110504 675 ntAPPRIS P1 TSL 5 BASIC5.68□□□□□ -1.5
Ccdc40Q8BI79 Gm15402-201ENSMUST00000114051 670 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
Ccdc40Q8BI79 Gm11821-201ENSMUST00000117335 979 ntBASIC5.68□□□□□ -1.5
Ccdc40Q8BI79 Gm16420-201ENSMUST00000120258 856 ntBASIC5.68□□□□□ -1.5
Ccdc40Q8BI79 4930556I23Rik-201ENSMUST00000160659 560 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
Ccdc40Q8BI79 Gm22993-201ENSMUST00000175423 254 ntBASIC5.68□□□□□ -1.5
Ccdc40Q8BI79 1110046J04Rik-203ENSMUST00000181800 777 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
Ccdc40Q8BI79 Gm27148-201ENSMUST00000185086 160 ntBASIC5.68□□□□□ -1.5
Ccdc40Q8BI79 Gm28750-201ENSMUST00000186327 658 ntTSL 5 BASIC5.68□□□□□ -1.5
Ccdc40Q8BI79 5033404E19Rik-201ENSMUST00000192616 630 ntBASIC5.68□□□□□ -1.5
Ccdc40Q8BI79 Gm36999-201ENSMUST00000192756 1046 ntBASIC5.68□□□□□ -1.5
Ccdc40Q8BI79 Gm29678-201ENSMUST00000193966 1134 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
Ccdc40Q8BI79 Gm43315-201ENSMUST00000198120 313 ntBASIC5.68□□□□□ -1.5
Ccdc40Q8BI79 Olfr712-ps1-201ENSMUST00000207690 950 ntBASIC5.68□□□□□ -1.5
Ccdc40Q8BI79 CAAA01216754.4-201ENSMUST00000216416 802 ntTSL 5 BASIC5.68□□□□□ -1.5
Ccdc40Q8BI79 AC123064.2-201ENSMUST00000217758 193 ntBASIC5.68□□□□□ -1.5
Ccdc40Q8BI79 AC147615.1-201ENSMUST00000218914 441 ntBASIC5.68□□□□□ -1.5
Ccdc40Q8BI79 CT030170.4-202ENSMUST00000221109 540 ntBASIC5.68□□□□□ -1.5
Ccdc40Q8BI79 Gm10037-204ENSMUST00000222626 692 ntAPPRIS ALT2 TSL 3 BASIC5.68□□□□□ -1.5
Ccdc40Q8BI79 AC168056.2-201ENSMUST00000223591 269 ntBASIC5.68□□□□□ -1.5
Ccdc40Q8BI79 AC156559.2-201ENSMUST00000224403 384 ntBASIC5.68□□□□□ -1.5
Ccdc40Q8BI79 Scgb2b27-201ENSMUST00000085620 512 ntAPPRIS P3 TSL 1 (best) BASIC5.68□□□□□ -1.5
Ccdc40Q8BI79 2700062C07Rik-201ENSMUST00000097646 1040 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
Ccdc40Q8BI79 Adgb-206ENSMUST00000208717 4902 ntAPPRIS ALT2 TSL 5 BASIC5.68□□□□□ -1.5
Ccdc40Q8BI79 Lrrc4c-203ENSMUST00000162807 3132 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
Ccdc40Q8BI79 Gm28999-201ENSMUST00000188063 1498 ntTSL 5 BASIC5.68□□□□□ -1.5
Ccdc40Q8BI79 Gm28393-201ENSMUST00000191261 1498 ntTSL 5 BASIC5.68□□□□□ -1.5
Ccdc40Q8BI79 Gm38168-201ENSMUST00000191717 1493 ntTSL 5 BASIC5.68□□□□□ -1.5
Ccdc40Q8BI79 Gm37572-202ENSMUST00000194043 1493 ntTSL 5 BASIC5.68□□□□□ -1.5
Ccdc40Q8BI79 Olfr372-202ENSMUST00000215324 3542 ntAPPRIS P1 TSL 5 BASIC5.68□□□□□ -1.5
Ccdc40Q8BI79 Gm14857-201ENSMUST00000117862 3185 ntBASIC5.68□□□□□ -1.5
Ccdc40Q8BI79 Gm42548-201ENSMUST00000202669 3933 ntBASIC5.68□□□□□ -1.5
Ccdc40Q8BI79 Olfr1209-202ENSMUST00000213136 5611 ntAPPRIS P1 TSL 3 BASIC5.68□□□□□ -1.5
Ccdc40Q8BI79 Pum2-209ENSMUST00000168361 6226 ntAPPRIS P3 TSL 5 BASIC5.68□□□□□ -1.5
Ccdc40Q8BI79 AC158388.2-201ENSMUST00000223665 1314 ntBASIC5.68□□□□□ -1.5
Ccdc40Q8BI79 Gm28964-202ENSMUST00000186771 1502 ntTSL 5 BASIC5.68□□□□□ -1.5
Retrieved 100 of 76,532 protein–RNA pairs in 101.9 ms