Protein–RNA interactions for Protein: Q7TPM3

Trim17, E3 ubiquitin-protein ligase TRIM17, mousemouse

Predictions only

Length 477 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim17Q7TPM3 Ssxb1-201ENSMUST00000037297 875 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
Trim17Q7TPM3 Mir30b-201ENSMUST00000083542 96 ntBASIC5.8□□□□□ -1.48
Trim17Q7TPM3 Olfr48-201ENSMUST00000099762 906 ntAPPRIS P1 BASIC5.8□□□□□ -1.48
Trim17Q7TPM3 Kat6b-ps1-201ENSMUST00000187624 3433 ntBASIC5.8□□□□□ -1.48
Trim17Q7TPM3 Olfr716-206ENSMUST00000215284 3515 ntAPPRIS P1 TSL 5 BASIC5.8□□□□□ -1.48
Trim17Q7TPM3 Mtx3-201ENSMUST00000076169 6275 ntAPPRIS P1 TSL 5 BASIC5.8□□□□□ -1.48
Trim17Q7TPM3 Ktn1-224ENSMUST00000191018 4033 ntAPPRIS ALT2 TSL 5 BASIC5.8□□□□□ -1.48
Trim17Q7TPM3 Slfn4-201ENSMUST00000000208 3958 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
Trim17Q7TPM3 Olfr808-202ENSMUST00000203236 4523 ntAPPRIS P1 TSL 2 BASIC5.8□□□□□ -1.48
Trim17Q7TPM3 Gm17791-201ENSMUST00000185660 1501 ntBASIC5.79□□□□□ -1.48
Trim17Q7TPM3 Gm17473-201ENSMUST00000180585 2216 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
Trim17Q7TPM3 Agbl2-208ENSMUST00000170320 4507 ntAPPRIS P2 TSL 1 (best) BASIC5.79□□□□□ -1.48
Trim17Q7TPM3 Gm37400-201ENSMUST00000193148 3605 ntBASIC5.79□□□□□ -1.48
Trim17Q7TPM3 Olfr1200-202ENSMUST00000217588 4996 ntAPPRIS P1 TSL 5 BASIC5.79□□□□□ -1.48
Trim17Q7TPM3 Gm45149-201ENSMUST00000206459 2172 ntBASIC5.79□□□□□ -1.48
Trim17Q7TPM3 Ranbp3l-201ENSMUST00000053308 3017 ntAPPRIS P1 TSL 5 BASIC5.79□□□□□ -1.48
Trim17Q7TPM3 Gm39327-201ENSMUST00000213594 1982 ntTSL 5 BASIC5.79□□□□□ -1.48
Trim17Q7TPM3 Kat6b-ps2-201ENSMUST00000188339 1600 ntBASIC5.79□□□□□ -1.48
Trim17Q7TPM3 Gm15560-201ENSMUST00000117107 643 ntBASIC5.79□□□□□ -1.48
Trim17Q7TPM3 Gm12732-201ENSMUST00000121688 180 ntBASIC5.79□□□□□ -1.48
Trim17Q7TPM3 Bloc1s1-202ENSMUST00000131271 475 ntTSL 5 BASIC5.79□□□□□ -1.48
Trim17Q7TPM3 Gm16725-201ENSMUST00000138744 1253 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
Trim17Q7TPM3 4933401B06Rik-201ENSMUST00000139758 1155 ntBASIC5.79□□□□□ -1.48
Trim17Q7TPM3 Gm16060-201ENSMUST00000153140 478 ntBASIC5.79□□□□□ -1.48
Trim17Q7TPM3 Gm10319-202ENSMUST00000159439 846 ntBASIC5.79□□□□□ -1.48
Trim17Q7TPM3 Gm8185-201ENSMUST00000160999 669 ntBASIC5.79□□□□□ -1.48
Trim17Q7TPM3 Cnot2-213ENSMUST00000169921 2120 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
Trim17Q7TPM3 Gm25534-201ENSMUST00000175365 125 ntBASIC5.79□□□□□ -1.48
Trim17Q7TPM3 Gm24949-201ENSMUST00000183609 215 ntBASIC5.79□□□□□ -1.48
Trim17Q7TPM3 Gm27193-201ENSMUST00000184217 586 ntBASIC5.79□□□□□ -1.48
Trim17Q7TPM3 Gm21842-202ENSMUST00000185311 174 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
Trim17Q7TPM3 Gm29285-201ENSMUST00000185500 174 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
Trim17Q7TPM3 Gm21801-202ENSMUST00000185537 174 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
Trim17Q7TPM3 Gm28312-201ENSMUST00000185976 174 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
Trim17Q7TPM3 Gm29213-201ENSMUST00000186199 174 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
Trim17Q7TPM3 Gm21428-201ENSMUST00000186550 174 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
Trim17Q7TPM3 Gm29370-201ENSMUST00000186581 174 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
Trim17Q7TPM3 Gm28604-201ENSMUST00000186629 484 ntBASIC5.79□□□□□ -1.48
Trim17Q7TPM3 Gm21633-202ENSMUST00000186630 174 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
Trim17Q7TPM3 Gm28890-201ENSMUST00000186686 173 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
Trim17Q7TPM3 Gm28092-201ENSMUST00000186709 174 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
Trim17Q7TPM3 Gm28566-201ENSMUST00000186714 484 ntBASIC5.79□□□□□ -1.48
Trim17Q7TPM3 Gm21572-202ENSMUST00000186850 174 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
Trim17Q7TPM3 Gm21916-202ENSMUST00000187044 174 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
Trim17Q7TPM3 Gm29839-201ENSMUST00000187045 174 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
Trim17Q7TPM3 Gm28442-201ENSMUST00000187052 174 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
Trim17Q7TPM3 Gm21780-202ENSMUST00000187110 174 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
Trim17Q7TPM3 Gm29656-201ENSMUST00000187236 174 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
Trim17Q7TPM3 Gm21821-202ENSMUST00000187288 175 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
Trim17Q7TPM3 Gm28886-201ENSMUST00000187350 174 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
Trim17Q7TPM3 Gm21599-202ENSMUST00000187381 174 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
Trim17Q7TPM3 Gm28128-201ENSMUST00000187403 174 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
Trim17Q7TPM3 Gm21450-201ENSMUST00000187408 174 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
Trim17Q7TPM3 Gm28194-201ENSMUST00000187412 484 ntBASIC5.79□□□□□ -1.48
Trim17Q7TPM3 Gm28689-201ENSMUST00000187441 174 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
Trim17Q7TPM3 Gm28851-201ENSMUST00000187800 174 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
Trim17Q7TPM3 Gm28886-202ENSMUST00000187889 484 ntBASIC5.79□□□□□ -1.48
Trim17Q7TPM3 Gm28554-201ENSMUST00000187964 174 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
Trim17Q7TPM3 Gm28984-201ENSMUST00000188202 174 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
Trim17Q7TPM3 Gm21529-202ENSMUST00000188473 174 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
Trim17Q7TPM3 Gm28604-202ENSMUST00000188638 174 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
Trim17Q7TPM3 Gm21588-202ENSMUST00000188721 174 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
Trim17Q7TPM3 Gm21539-202ENSMUST00000188764 174 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
Trim17Q7TPM3 Gm28216-201ENSMUST00000188785 174 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
Trim17Q7TPM3 Gm29645-201ENSMUST00000189117 174 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
Trim17Q7TPM3 Gm28554-202ENSMUST00000189175 484 ntBASIC5.79□□□□□ -1.48
Trim17Q7TPM3 Gm21413-201ENSMUST00000189224 174 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
Trim17Q7TPM3 Gm21723-202ENSMUST00000189444 174 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
Trim17Q7TPM3 Gm36782-201ENSMUST00000189459 174 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
Trim17Q7TPM3 Gm21419-201ENSMUST00000189495 173 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
Trim17Q7TPM3 Gm28566-202ENSMUST00000189532 174 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
Trim17Q7TPM3 Gm29213-202ENSMUST00000189703 484 ntBASIC5.79□□□□□ -1.48
Trim17Q7TPM3 Gm21626-202ENSMUST00000189751 174 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
Trim17Q7TPM3 Gm28851-202ENSMUST00000189757 484 ntBASIC5.79□□□□□ -1.48
Trim17Q7TPM3 Gm28656-201ENSMUST00000190017 174 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
Trim17Q7TPM3 Gm28461-201ENSMUST00000190023 484 ntBASIC5.79□□□□□ -1.48
Trim17Q7TPM3 Gm21562-202ENSMUST00000190314 174 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
Trim17Q7TPM3 Gm28517-201ENSMUST00000190343 174 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
Trim17Q7TPM3 Gm29531-201ENSMUST00000190569 174 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
Trim17Q7TPM3 Gm21914-202ENSMUST00000190577 174 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
Trim17Q7TPM3 Gm20978-201ENSMUST00000190688 174 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
Trim17Q7TPM3 Gm20963-201ENSMUST00000190880 174 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
Trim17Q7TPM3 Gm29316-201ENSMUST00000190953 174 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
Trim17Q7TPM3 Gm29351-201ENSMUST00000191052 174 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
Trim17Q7TPM3 Gm29466-201ENSMUST00000191077 174 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
Trim17Q7TPM3 Gm20987-201ENSMUST00000191165 174 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
Trim17Q7TPM3 Gm28194-202ENSMUST00000191217 174 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
Trim17Q7TPM3 Gm28461-202ENSMUST00000191406 174 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
Trim17Q7TPM3 Gm37927-201ENSMUST00000192238 174 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
Trim17Q7TPM3 Gm37544-201ENSMUST00000192803 174 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
Trim17Q7TPM3 Gm37635-201ENSMUST00000193129 174 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
Trim17Q7TPM3 Gm21809-202ENSMUST00000194072 174 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
Trim17Q7TPM3 Gm45082-201ENSMUST00000206082 601 ntBASIC5.79□□□□□ -1.48
Trim17Q7TPM3 AC160980.2-201ENSMUST00000225131 949 ntBASIC5.79□□□□□ -1.48
Trim17Q7TPM3 Orm3-201ENSMUST00000006687 773 ntAPPRIS P1 TSL 5 BASIC5.79□□□□□ -1.48
Trim17Q7TPM3 Clec4b1-201ENSMUST00000077228 674 ntAPPRIS P3 TSL 1 (best) BASIC5.79□□□□□ -1.48
Trim17Q7TPM3 Mctp1-205ENSMUST00000126960 1780 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
Trim17Q7TPM3 Vmn2r42-201ENSMUST00000086282 3623 ntAPPRIS P2 TSL 1 (best) BASIC5.79□□□□□ -1.48
Trim17Q7TPM3 Gm16170-201ENSMUST00000156882 3754 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
Trim17Q7TPM3 Npsr1-201ENSMUST00000059650 3791 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
Retrieved 100 of 76,532 protein–RNA pairs in 57.6 ms