Protein–RNA interactions for Protein: Q6P9L4

Usp49, Ubiquitin carboxyl-terminal hydrolase 49, mousemouse

Predictions only

Length 685 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp49Q6P9L4 Lgals8-208ENSMUST00000144283 1148 ntTSL 5 BASIC6.11□□□□□ -1.43
Usp49Q6P9L4 4930519D14Rik-201ENSMUST00000151471 1137 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
Usp49Q6P9L4 Gm26371-201ENSMUST00000157829 104 ntBASIC6.11□□□□□ -1.43
Usp49Q6P9L4 AC122858.3-202ENSMUST00000161721 433 ntTSL 5 BASIC6.11□□□□□ -1.43
Usp49Q6P9L4 Gm20397-201ENSMUST00000174520 362 ntBASIC6.11□□□□□ -1.43
Usp49Q6P9L4 Gm22411-201ENSMUST00000175462 126 ntBASIC6.11□□□□□ -1.43
Usp49Q6P9L4 Gm22002-201ENSMUST00000175622 125 ntBASIC6.11□□□□□ -1.43
Usp49Q6P9L4 Obox3-ps2-201ENSMUST00000177243 1004 ntBASIC6.11□□□□□ -1.43
Usp49Q6P9L4 Gm3696-202ENSMUST00000179898 612 ntAPPRIS P1 TSL 5 BASIC6.11□□□□□ -1.43
Usp49Q6P9L4 Gm3428-201ENSMUST00000183450 521 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
Usp49Q6P9L4 Gm27409-201ENSMUST00000184727 80 ntBASIC6.11□□□□□ -1.43
Usp49Q6P9L4 Gm20561-201ENSMUST00000188131 292 ntBASIC6.11□□□□□ -1.43
Usp49Q6P9L4 1700047L14Rik-201ENSMUST00000189659 511 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
Usp49Q6P9L4 Gm37708-201ENSMUST00000192337 895 ntBASIC6.11□□□□□ -1.43
Usp49Q6P9L4 Gm33571-201ENSMUST00000193271 657 ntBASIC6.11□□□□□ -1.43
Usp49Q6P9L4 Alox5ap-203ENSMUST00000200928 356 ntTSL 3 BASIC6.11□□□□□ -1.43
Usp49Q6P9L4 Gm31897-201ENSMUST00000205924 340 ntTSL 5 BASIC6.11□□□□□ -1.43
Usp49Q6P9L4 Dlg2-216ENSMUST00000209170 1057 ntTSL 2 BASIC6.11□□□□□ -1.43
Usp49Q6P9L4 AC131117.2-203ENSMUST00000225886 950 ntBASIC6.11□□□□□ -1.43
Usp49Q6P9L4 AC122858.1-201ENSMUST00000226212 433 ntBASIC6.11□□□□□ -1.43
Usp49Q6P9L4 AC122858.3-201ENSMUST00000226341 740 ntBASIC6.11□□□□□ -1.43
Usp49Q6P9L4 Anxa13-202ENSMUST00000227274 1201 ntBASIC6.11□□□□□ -1.43
Usp49Q6P9L4 AC122858.1-202ENSMUST00000228290 986 ntBASIC6.11□□□□□ -1.43
Usp49Q6P9L4 Icos-201ENSMUST00000027162 810 ntAPPRIS ALT2 TSL 1 (best) BASIC6.11□□□□□ -1.43
Usp49Q6P9L4 Gm9958-201ENSMUST00000068250 1284 ntAPPRIS P1 BASIC6.11□□□□□ -1.43
Usp49Q6P9L4 Gm10780-201ENSMUST00000099459 285 ntBASIC6.11□□□□□ -1.43
Usp49Q6P9L4 Vmn1r203-202ENSMUST00000227520 8227 ntAPPRIS P1 BASIC6.11□□□□□ -1.43
Usp49Q6P9L4 Mboat2-204ENSMUST00000221952 6792 ntAPPRIS ALT2 TSL 1 (best) BASIC6.11□□□□□ -1.43
Usp49Q6P9L4 Gm37760-201ENSMUST00000194726 3841 ntBASIC6.11□□□□□ -1.43
Usp49Q6P9L4 Lingo2-210ENSMUST00000164772 3562 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
Usp49Q6P9L4 Olfr1309-204ENSMUST00000215045 5236 ntAPPRIS P1 TSL 5 BASIC6.11□□□□□ -1.43
Usp49Q6P9L4 Gm43302-201ENSMUST00000050011 4310 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
Usp49Q6P9L4 Rapgef6-201ENSMUST00000094536 3372 ntTSL 5 BASIC6.1□□□□□ -1.43
Usp49Q6P9L4 Rlf-203ENSMUST00000168615 6585 ntAPPRIS ALT2 TSL 5 BASIC6.1□□□□□ -1.43
Usp49Q6P9L4 Olfr47-202ENSMUST00000215569 1603 ntAPPRIS P1 TSL 5 BASIC6.1□□□□□ -1.43
Usp49Q6P9L4 Gm9408-201ENSMUST00000197375 1505 ntBASIC6.1□□□□□ -1.43
Usp49Q6P9L4 Gm43333-201ENSMUST00000198340 2262 ntBASIC6.1□□□□□ -1.43
Usp49Q6P9L4 Gm37834-201ENSMUST00000194517 3035 ntBASIC6.1□□□□□ -1.43
Usp49Q6P9L4 Vmn1r27-202ENSMUST00000226666 2969 ntAPPRIS ALT2 BASIC6.1□□□□□ -1.43
Usp49Q6P9L4 Sh3kbp1-202ENSMUST00000080394 2980 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
Usp49Q6P9L4 Naip2-203ENSMUST00000167986 4356 ntAPPRIS ALT2 TSL 5 BASIC6.1□□□□□ -1.43
Usp49Q6P9L4 Gm44739-201ENSMUST00000205294 1426 ntBASIC6.1□□□□□ -1.43
Usp49Q6P9L4 Odam-202ENSMUST00000129757 1370 ntAPPRIS P1 TSL 5 BASIC6.1□□□□□ -1.43
Usp49Q6P9L4 Rgs17-204ENSMUST00000131996 8107 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
Usp49Q6P9L4 Olfr9-201ENSMUST00000091996 2672 ntAPPRIS P1 BASIC6.1□□□□□ -1.43
Usp49Q6P9L4 AC105407.2-201ENSMUST00000223707 3911 ntBASIC6.1□□□□□ -1.43
Usp49Q6P9L4 Traj16-201ENSMUST00000103725 61 ntAPPRIS P1 BASIC6.1□□□□□ -1.43
Usp49Q6P9L4 Cep112-203ENSMUST00000106718 839 ntTSL 5 BASIC6.1□□□□□ -1.43
Usp49Q6P9L4 Gm9427-201ENSMUST00000116187 651 ntBASIC6.1□□□□□ -1.43
Usp49Q6P9L4 Spin2-ps1-201ENSMUST00000116643 875 ntBASIC6.1□□□□□ -1.43
Usp49Q6P9L4 Gm14308-202ENSMUST00000117267 777 ntTSL 3 BASIC6.1□□□□□ -1.43
Usp49Q6P9L4 Gm13681-201ENSMUST00000117925 210 ntBASIC6.1□□□□□ -1.43
Usp49Q6P9L4 Gm3943-201ENSMUST00000118606 718 ntBASIC6.1□□□□□ -1.43
Usp49Q6P9L4 Gm11483-201ENSMUST00000119839 247 ntBASIC6.1□□□□□ -1.43
Usp49Q6P9L4 Gm3757-201ENSMUST00000125878 675 ntBASIC6.1□□□□□ -1.43
Usp49Q6P9L4 Gm11802-201ENSMUST00000137749 653 ntTSL 3 BASIC6.1□□□□□ -1.43
Usp49Q6P9L4 Crem-236ENSMUST00000154715 1167 ntTSL 5 BASIC6.1□□□□□ -1.43
Usp49Q6P9L4 Gm25152-201ENSMUST00000157117 114 ntBASIC6.1□□□□□ -1.43
Usp49Q6P9L4 Gm5277-201ENSMUST00000164923 556 ntBASIC6.1□□□□□ -1.43
Usp49Q6P9L4 Gm7271-201ENSMUST00000172369 519 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
Usp49Q6P9L4 Gm23799-201ENSMUST00000175559 120 ntBASIC6.1□□□□□ -1.43
Usp49Q6P9L4 Spin2-ps6-201ENSMUST00000178459 525 ntAPPRIS P1 BASIC6.1□□□□□ -1.43
Usp49Q6P9L4 Rhoay-ps2-201ENSMUST00000186362 581 ntBASIC6.1□□□□□ -1.43
Usp49Q6P9L4 Gm2325-201ENSMUST00000186637 581 ntBASIC6.1□□□□□ -1.43
Usp49Q6P9L4 Gm6137-201ENSMUST00000187552 578 ntBASIC6.1□□□□□ -1.43
Usp49Q6P9L4 Gatad1-204ENSMUST00000196304 704 ntTSL 3 BASIC6.1□□□□□ -1.43
Usp49Q6P9L4 9330198I05Rik-201ENSMUST00000196846 1095 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
Usp49Q6P9L4 Clec2j-202ENSMUST00000203658 606 ntBASIC6.1□□□□□ -1.43
Usp49Q6P9L4 Gm4032-201ENSMUST00000210886 487 ntBASIC6.1□□□□□ -1.43
Usp49Q6P9L4 Gm34096-201ENSMUST00000211296 530 ntTSL 3 BASIC6.1□□□□□ -1.43
Usp49Q6P9L4 Gm18645-202ENSMUST00000212222 760 ntBASIC6.1□□□□□ -1.43
Usp49Q6P9L4 AC145731.1-201ENSMUST00000214083 344 ntTSL 5 BASIC6.1□□□□□ -1.43
Usp49Q6P9L4 AC164629.3-201ENSMUST00000219325 611 ntTSL 5 BASIC6.1□□□□□ -1.43
Usp49Q6P9L4 AC153548.2-201ENSMUST00000219770 885 ntBASIC6.1□□□□□ -1.43
Usp49Q6P9L4 AC154583.1-201ENSMUST00000224788 655 ntBASIC6.1□□□□□ -1.43
Usp49Q6P9L4 Vmn1r16-201ENSMUST00000227168 912 ntAPPRIS P2 BASIC6.1□□□□□ -1.43
Usp49Q6P9L4 Glt6d1-201ENSMUST00000038010 1211 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
Usp49Q6P9L4 Tsga13-201ENSMUST00000048580 1141 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
Usp49Q6P9L4 Magea4-201ENSMUST00000048675 948 ntAPPRIS P1 BASIC6.1□□□□□ -1.43
Usp49Q6P9L4 Olfr1107-201ENSMUST00000099865 1109 ntAPPRIS P1 BASIC6.1□□□□□ -1.43
Usp49Q6P9L4 Olfr432-202ENSMUST00000213211 4435 ntAPPRIS P1 TSL 5 BASIC6.1□□□□□ -1.43
Usp49Q6P9L4 Elf1-204ENSMUST00000227192 3765 ntAPPRIS ALT2 BASIC6.1□□□□□ -1.43
Usp49Q6P9L4 Gm16041-201ENSMUST00000144339 3725 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
Usp49Q6P9L4 Usp26-202ENSMUST00000114869 4133 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
Usp49Q6P9L4 Olfr701-203ENSMUST00000217739 4100 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
Usp49Q6P9L4 Usp26-201ENSMUST00000069509 4120 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
Usp49Q6P9L4 Zscan4e-202ENSMUST00000210521 1745 ntAPPRIS P1 TSL 5 BASIC6.1□□□□□ -1.43
Usp49Q6P9L4 Gm43319-201ENSMUST00000198036 2270 ntBASIC6.1□□□□□ -1.43
Usp49Q6P9L4 Dopey1-201ENSMUST00000034987 8933 ntAPPRIS P1 TSL 5 BASIC6.1□□□□□ -1.43
Usp49Q6P9L4 Olfr906-202ENSMUST00000214344 3775 ntAPPRIS P1 TSL 3 BASIC6.1□□□□□ -1.43
Usp49Q6P9L4 Olfr644-202ENSMUST00000213184 3572 ntAPPRIS P1 TSL 5 BASIC6.1□□□□□ -1.43
Usp49Q6P9L4 Sh2d1b1-201ENSMUST00000179976 2544 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.43
Usp49Q6P9L4 Ralgapa2-202ENSMUST00000109986 11030 ntAPPRIS P2 TSL 5 BASIC6.09□□□□□ -1.43
Usp49Q6P9L4 Snhg14-214ENSMUST00000191191 3991 ntTSL 1 (best) BASIC6.09□□□□□ -1.43
Usp49Q6P9L4 AL670757.1-201ENSMUST00000223668 1959 ntBASIC6.09□□□□□ -1.43
Usp49Q6P9L4 1700019J19Rik-202ENSMUST00000213583 1856 ntTSL 5 BASIC6.09□□□□□ -1.43
Usp49Q6P9L4 Kmt2d-202ENSMUST00000178486 19805 ntAPPRIS ALT2 TSL 5 BASIC6.09□□□□□ -1.43
Usp49Q6P9L4 Sis-202ENSMUST00000167334 5953 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.43
Usp49Q6P9L4 4932411K12Rik-203ENSMUST00000210384 1351 ntTSL 5 BASIC6.09□□□□□ -1.43
Usp49Q6P9L4 Cyp39a1-201ENSMUST00000170988 3053 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.43
Retrieved 100 of 76,532 protein–RNA pairs in 76.1 ms