Protein–RNA interactions for Protein: Q60649

Clpb, Caseinolytic peptidase B protein homolog, mousemouse

Predictions only

Length 677 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ClpbQ60649 Gm43169-201ENSMUST00000199544 4734 ntBASIC5.43□□□□□ -1.54
ClpbQ60649 Sirpb1c-203ENSMUST00000108350 2489 ntAPPRIS ALT2 TSL 1 (best) BASIC5.42□□□□□ -1.54
ClpbQ60649 Gm18852-201ENSMUST00000184149 3593 ntBASIC5.42□□□□□ -1.54
ClpbQ60649 Als2cr12-203ENSMUST00000188772 1382 ntAPPRIS ALT2 TSL 1 (best) BASIC5.42□□□□□ -1.54
ClpbQ60649 AC165273.1-201ENSMUST00000222780 2452 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
ClpbQ60649 Zfp317-202ENSMUST00000208694 3988 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
ClpbQ60649 Mageb18-201ENSMUST00000088137 1571 ntAPPRIS P1 BASIC5.42□□□□□ -1.54
ClpbQ60649 A830019P07Rik-201ENSMUST00000178904 1777 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
ClpbQ60649 Slc7a2-203ENSMUST00000117077 7626 ntAPPRIS ALT1 TSL 1 (best) BASIC5.42□□□□□ -1.54
ClpbQ60649 Olfr1252-202ENSMUST00000213196 3331 ntAPPRIS P1 TSL 5 BASIC5.42□□□□□ -1.54
ClpbQ60649 Vmn2r-ps38-201ENSMUST00000173752 2573 ntBASIC5.42□□□□□ -1.54
ClpbQ60649 Olfr1062-203ENSMUST00000217481 3726 ntAPPRIS P1 TSL 5 BASIC5.42□□□□□ -1.54
ClpbQ60649 Olfr1283-202ENSMUST00000204064 1625 ntAPPRIS P1 TSL 5 BASIC5.42□□□□□ -1.54
ClpbQ60649 Rbm41-201ENSMUST00000033810 2787 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
ClpbQ60649 Olfr813-202ENSMUST00000204622 2410 ntAPPRIS P1 TSL 5 BASIC5.42□□□□□ -1.54
ClpbQ60649 C4bp-201ENSMUST00000027657 3045 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
ClpbQ60649 Samt2-201ENSMUST00000101137 923 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
ClpbQ60649 Ighv1-20-201ENSMUST00000103506 348 ntAPPRIS ALT2 BASIC5.42□□□□□ -1.54
ClpbQ60649 Ccdc7b-203ENSMUST00000108745 1047 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
ClpbQ60649 Gm14554-201ENSMUST00000119548 661 ntBASIC5.42□□□□□ -1.54
ClpbQ60649 Gm14563-201ENSMUST00000120571 354 ntBASIC5.42□□□□□ -1.54
ClpbQ60649 Olfr360-201ENSMUST00000120704 954 ntAPPRIS P1 BASIC5.42□□□□□ -1.54
ClpbQ60649 Llph-ps1-201ENSMUST00000121281 390 ntBASIC5.42□□□□□ -1.54
ClpbQ60649 Gm12001-201ENSMUST00000121727 913 ntBASIC5.42□□□□□ -1.54
ClpbQ60649 Gm15877-201ENSMUST00000121897 964 ntBASIC5.42□□□□□ -1.54
ClpbQ60649 Gm15584-201ENSMUST00000123231 759 ntTSL 2 BASIC5.42□□□□□ -1.54
ClpbQ60649 4930405D11Rik-201ENSMUST00000132218 568 ntTSL 3 BASIC5.42□□□□□ -1.54
ClpbQ60649 Gm23587-201ENSMUST00000157658 84 ntBASIC5.42□□□□□ -1.54
ClpbQ60649 Gm23224-201ENSMUST00000158122 271 ntBASIC5.42□□□□□ -1.54
ClpbQ60649 Gm22530-201ENSMUST00000158820 118 ntBASIC5.42□□□□□ -1.54
ClpbQ60649 Gm3008-201ENSMUST00000160566 571 ntBASIC5.42□□□□□ -1.54
ClpbQ60649 Olfr102-201ENSMUST00000169373 1027 ntAPPRIS P1 BASIC5.42□□□□□ -1.54
ClpbQ60649 Gm21698-201ENSMUST00000178487 666 ntTSL 5 BASIC5.42□□□□□ -1.54
ClpbQ60649 Gm16531-201ENSMUST00000180658 967 ntBASIC5.42□□□□□ -1.54
ClpbQ60649 Mir7653-201ENSMUST00000184358 61 ntBASIC5.42□□□□□ -1.54
ClpbQ60649 Stk-ps2-204ENSMUST00000187808 616 ntBASIC5.42□□□□□ -1.54
ClpbQ60649 Gm29345-201ENSMUST00000189213 399 ntTSL 3 BASIC5.42□□□□□ -1.54
ClpbQ60649 1810006J02Rik-202ENSMUST00000191060 523 ntTSL 2 BASIC5.42□□□□□ -1.54
ClpbQ60649 Gm37187-201ENSMUST00000193425 341 ntBASIC5.42□□□□□ -1.54
ClpbQ60649 Gm37517-201ENSMUST00000194004 1289 ntBASIC5.42□□□□□ -1.54
ClpbQ60649 Gm3143-201ENSMUST00000196308 580 ntTSL 3 BASIC5.42□□□□□ -1.54
ClpbQ60649 Gm9057-201ENSMUST00000198791 296 ntBASIC5.42□□□□□ -1.54
ClpbQ60649 1810017P11Rik-201ENSMUST00000202592 558 ntBASIC5.42□□□□□ -1.54
ClpbQ60649 Olfr189-ps1-201ENSMUST00000205310 804 ntBASIC5.42□□□□□ -1.54
ClpbQ60649 Gm44997-202ENSMUST00000205970 425 ntTSL 3 BASIC5.42□□□□□ -1.54
ClpbQ60649 Gm5735-201ENSMUST00000207053 167 ntBASIC5.42□□□□□ -1.54
ClpbQ60649 Gm45689-201ENSMUST00000210522 133 ntBASIC5.42□□□□□ -1.54
ClpbQ60649 Gm18252-202ENSMUST00000214886 409 ntTSL 5 BASIC5.42□□□□□ -1.54
ClpbQ60649 CT030170.4-202ENSMUST00000221109 540 ntBASIC5.42□□□□□ -1.54
ClpbQ60649 AC134254.2-201ENSMUST00000221262 170 ntBASIC5.42□□□□□ -1.54
ClpbQ60649 AC125539.1-202ENSMUST00000226449 670 ntBASIC5.42□□□□□ -1.54
ClpbQ60649 AC161383.1-201ENSMUST00000227356 527 ntBASIC5.42□□□□□ -1.54
ClpbQ60649 AC107711.2-203ENSMUST00000227827 762 ntBASIC5.42□□□□□ -1.54
ClpbQ60649 AC116724.1-201ENSMUST00000227900 972 ntBASIC5.42□□□□□ -1.54
ClpbQ60649 AC166369.2-201ENSMUST00000228403 308 ntBASIC5.42□□□□□ -1.54
ClpbQ60649 AC154738.7-201ENSMUST00000228606 579 ntBASIC5.42□□□□□ -1.54
ClpbQ60649 Olfr670-201ENSMUST00000050482 939 ntAPPRIS P1 BASIC5.42□□□□□ -1.54
ClpbQ60649 Fam229b-201ENSMUST00000063204 745 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
ClpbQ60649 Olfr1056-201ENSMUST00000099893 1079 ntAPPRIS P1 BASIC5.42□□□□□ -1.54
ClpbQ60649 Obox7-203ENSMUST00000183788 1476 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
ClpbQ60649 Gm28322-201ENSMUST00000185627 1475 ntBASIC5.42□□□□□ -1.54
ClpbQ60649 Vmn1r200-205ENSMUST00000228726 5525 ntAPPRIS P2 BASIC5.42□□□□□ -1.54
ClpbQ60649 Mctp1-205ENSMUST00000126960 1780 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
ClpbQ60649 Zbtb20-204ENSMUST00000114694 26901 ntAPPRIS P3 TSL 5 BASIC5.42□□□□□ -1.54
ClpbQ60649 Olfr441-202ENSMUST00000213649 2402 ntAPPRIS P1 TSL 3 BASIC5.42□□□□□ -1.54
ClpbQ60649 AC159308.1-201ENSMUST00000216615 1351 ntBASIC5.42□□□□□ -1.54
ClpbQ60649 AC112972.2-201ENSMUST00000228702 2210 ntBASIC5.42□□□□□ -1.54
ClpbQ60649 Gm42725-201ENSMUST00000199296 4193 ntBASIC5.41□□□□□ -1.54
ClpbQ60649 Ptprd-204ENSMUST00000102834 8084 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
ClpbQ60649 Kat6b-ps2-201ENSMUST00000188339 1600 ntBASIC5.41□□□□□ -1.54
ClpbQ60649 Olfr972-202ENSMUST00000215303 1641 ntAPPRIS P1 TSL 2 BASIC5.41□□□□□ -1.54
ClpbQ60649 Nol8-201ENSMUST00000021824 4242 ntAPPRIS P2 TSL 5 BASIC5.41□□□□□ -1.54
ClpbQ60649 B130034C11Rik-201ENSMUST00000175717 1401 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
ClpbQ60649 Gm44175-201ENSMUST00000204863 4256 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
ClpbQ60649 Gm4011-201ENSMUST00000174657 2555 ntBASIC5.41□□□□□ -1.54
ClpbQ60649 Gm12185-201ENSMUST00000059930 5252 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
ClpbQ60649 Tgtp2-201ENSMUST00000046745 2810 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
ClpbQ60649 Anapc10-201ENSMUST00000048147 2801 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
ClpbQ60649 Prom1-207ENSMUST00000177946 3534 ntAPPRIS ALT2 TSL 5 BASIC5.41□□□□□ -1.54
ClpbQ60649 Gm13090-201ENSMUST00000105667 746 ntAPPRIS P1 TSL 3 BASIC5.41□□□□□ -1.54
ClpbQ60649 Gm14335-201ENSMUST00000119165 810 ntBASIC5.41□□□□□ -1.54
ClpbQ60649 Astx4d-201ENSMUST00000123136 1149 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
ClpbQ60649 Astx3-201ENSMUST00000123508 1150 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
ClpbQ60649 Gm14808-201ENSMUST00000129259 361 ntTSL 3 BASIC5.41□□□□□ -1.54
ClpbQ60649 Gm26372-201ENSMUST00000157831 236 ntBASIC5.41□□□□□ -1.54
ClpbQ60649 Gm15995-201ENSMUST00000159897 574 ntTSL 5 BASIC5.41□□□□□ -1.54
ClpbQ60649 Gm6245-201ENSMUST00000164699 768 ntBASIC5.41□□□□□ -1.54
ClpbQ60649 A730017C20Rik-206ENSMUST00000175830 731 ntAPPRIS ALT2 TSL 5 BASIC5.41□□□□□ -1.54
ClpbQ60649 Astx4a-201ENSMUST00000177683 1149 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
ClpbQ60649 Astx1c-201ENSMUST00000177724 1150 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
ClpbQ60649 Astx4c-201ENSMUST00000178390 1149 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
ClpbQ60649 Astx1b-201ENSMUST00000178608 1150 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
ClpbQ60649 Astx2-201ENSMUST00000179135 1150 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
ClpbQ60649 Astx4b-201ENSMUST00000179359 1149 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
ClpbQ60649 Astx1a-201ENSMUST00000179529 1150 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
ClpbQ60649 Astx5-201ENSMUST00000179723 1150 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
ClpbQ60649 Astx6-201ENSMUST00000180281 1150 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
ClpbQ60649 Gm4832-201ENSMUST00000182679 399 ntBASIC5.41□□□□□ -1.54
ClpbQ60649 Obox4-ps1-201ENSMUST00000184446 700 ntBASIC5.41□□□□□ -1.54
ClpbQ60649 Gm29093-201ENSMUST00000187366 409 ntTSL 5 BASIC5.41□□□□□ -1.54
Retrieved 100 of 76,532 protein–RNA pairs in 92.5 ms