Protein–RNA interactions for Protein: Q4ACU6

Shank3, SH3 and multiple ankyrin repeat domains protein 3, mousemouse

Predictions only

Length 1,730 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shank3Q4ACU6 Gm29072-201ENSMUST00000191149 678 ntBASIC6.53□□□□□ -1.36
Shank3Q4ACU6 Gm37836-201ENSMUST00000195875 175 ntBASIC6.53□□□□□ -1.36
Shank3Q4ACU6 Gm43136-201ENSMUST00000200403 636 ntBASIC6.53□□□□□ -1.36
Shank3Q4ACU6 Olfr915-201ENSMUST00000215191 933 ntAPPRIS P1 BASIC6.53□□□□□ -1.36
Shank3Q4ACU6 Gm2645-201ENSMUST00000223516 547 ntBASIC6.53□□□□□ -1.36
Shank3Q4ACU6 CT025689.2-201ENSMUST00000224979 429 ntBASIC6.53□□□□□ -1.36
Shank3Q4ACU6 Gm14399-201ENSMUST00000099029 192 ntTSL 5 BASIC6.53□□□□□ -1.36
Shank3Q4ACU6 Tmem56-201ENSMUST00000029777 6248 ntAPPRIS P2 TSL 1 (best) BASIC6.53□□□□□ -1.36
Shank3Q4ACU6 Ndst3-203ENSMUST00000132112 4460 ntTSL 1 (best) BASIC6.53□□□□□ -1.36
Shank3Q4ACU6 Zfp287-201ENSMUST00000005399 3220 ntAPPRIS ALT2 TSL 1 (best) BASIC6.53□□□□□ -1.36
Shank3Q4ACU6 Gm8402-201ENSMUST00000118183 1770 ntBASIC6.53□□□□□ -1.36
Shank3Q4ACU6 Gm8383-201ENSMUST00000121179 1770 ntBASIC6.53□□□□□ -1.36
Shank3Q4ACU6 Gm44695-201ENSMUST00000205567 1631 ntBASIC6.52□□□□□ -1.37
Shank3Q4ACU6 Gmeb1-207ENSMUST00000168553 6523 ntAPPRIS P1 TSL 5 BASIC6.52□□□□□ -1.37
Shank3Q4ACU6 Olfr859-203ENSMUST00000217280 9596 ntAPPRIS P1 TSL 5 BASIC6.52□□□□□ -1.37
Shank3Q4ACU6 Agl-208ENSMUST00000162792 6978 ntAPPRIS P1 TSL 2 BASIC6.52□□□□□ -1.37
Shank3Q4ACU6 Zfp329-202ENSMUST00000108546 2577 ntTSL 1 (best) BASIC6.52□□□□□ -1.37
Shank3Q4ACU6 Rbpj-202ENSMUST00000087360 5252 ntTSL 5 BASIC6.52□□□□□ -1.37
Shank3Q4ACU6 Gm43528-201ENSMUST00000199492 1674 ntBASIC6.52□□□□□ -1.37
Shank3Q4ACU6 Gm11290-204ENSMUST00000224688 3042 ntBASIC6.52□□□□□ -1.37
Shank3Q4ACU6 Clasp1-204ENSMUST00000178710 7566 ntAPPRIS ALT2 TSL 5 BASIC6.52□□□□□ -1.37
Shank3Q4ACU6 Frrs1-202ENSMUST00000195905 6823 ntAPPRIS P1 TSL 5 BASIC6.52□□□□□ -1.37
Shank3Q4ACU6 Klkb1-201ENSMUST00000026907 5249 ntAPPRIS P1 TSL 1 (best) BASIC6.52□□□□□ -1.37
Shank3Q4ACU6 CT009480.1-201ENSMUST00000225771 4480 ntBASIC6.52□□□□□ -1.37
Shank3Q4ACU6 4930551O13Rik-201ENSMUST00000145585 1065 ntTSL 1 (best) BASIC6.52□□□□□ -1.37
Shank3Q4ACU6 4930519D14Rik-201ENSMUST00000151471 1137 ntTSL 1 (best) BASIC6.52□□□□□ -1.37
Shank3Q4ACU6 Gm26085-201ENSMUST00000157900 116 ntBASIC6.52□□□□□ -1.37
Shank3Q4ACU6 4930558K02Rik-202ENSMUST00000162676 983 ntAPPRIS P1 TSL 3 BASIC6.52□□□□□ -1.37
Shank3Q4ACU6 Gm38053-201ENSMUST00000193938 160 ntBASIC6.52□□□□□ -1.37
Shank3Q4ACU6 Gm32846-201ENSMUST00000205665 842 ntTSL 1 (best) BASIC6.52□□□□□ -1.37
Shank3Q4ACU6 Gm44603-201ENSMUST00000206820 367 ntBASIC6.52□□□□□ -1.37
Shank3Q4ACU6 Gm8189-203ENSMUST00000211159 1225 ntBASIC6.52□□□□□ -1.37
Shank3Q4ACU6 Olfr1115-204ENSMUST00000217196 2109 ntAPPRIS P1 TSL 3 BASIC6.52□□□□□ -1.37
Shank3Q4ACU6 Gm32526-201ENSMUST00000221878 981 ntBASIC6.52□□□□□ -1.37
Shank3Q4ACU6 Pcm1-204ENSMUST00000211247 6484 ntAPPRIS ALT2 TSL 5 BASIC6.52□□□□□ -1.37
Shank3Q4ACU6 Vmn2r94-201ENSMUST00000172190 2457 ntAPPRIS P1 TSL 5 BASIC6.52□□□□□ -1.37
Shank3Q4ACU6 Iqub-201ENSMUST00000052277 3651 ntAPPRIS P1 TSL 1 (best) BASIC6.52□□□□□ -1.37
Shank3Q4ACU6 Timm17a-201ENSMUST00000081104 7280 ntAPPRIS P1 TSL 1 (best) BASIC6.52□□□□□ -1.37
Shank3Q4ACU6 Slc26a3-201ENSMUST00000001254 2908 ntAPPRIS P1 TSL 1 (best) BASIC6.52□□□□□ -1.37
Shank3Q4ACU6 Mug4-ps-201ENSMUST00000203118 3578 ntBASIC6.52□□□□□ -1.37
Shank3Q4ACU6 4933409F18Rik-202ENSMUST00000222026 1584 ntTSL 1 (best) BASIC6.52□□□□□ -1.37
Shank3Q4ACU6 Nmd3-201ENSMUST00000029358 9135 ntAPPRIS P1 TSL 1 (best) BASIC6.52□□□□□ -1.37
Shank3Q4ACU6 Ikzf5-201ENSMUST00000046306 4430 ntAPPRIS P1 TSL 1 (best) BASIC6.51□□□□□ -1.37
Shank3Q4ACU6 Ulbp1-202ENSMUST00000177585 3815 ntAPPRIS P2 TSL 1 (best) BASIC6.51□□□□□ -1.37
Shank3Q4ACU6 Gm28183-201ENSMUST00000191321 1406 ntTSL 5 BASIC6.51□□□□□ -1.37
Shank3Q4ACU6 Slc17a3-201ENSMUST00000039721 4276 ntAPPRIS P3 TSL 1 (best) BASIC6.51□□□□□ -1.37
Shank3Q4ACU6 Pot1a-201ENSMUST00000115327 2447 ntTSL 1 (best) BASIC6.51□□□□□ -1.37
Shank3Q4ACU6 Cep97-201ENSMUST00000023270 7911 ntAPPRIS P1 TSL 1 (best) BASIC6.51□□□□□ -1.37
Shank3Q4ACU6 Gm38351-201ENSMUST00000195466 2518 ntBASIC6.51□□□□□ -1.37
Shank3Q4ACU6 Rbm46-202ENSMUST00000182637 2058 ntTSL 5 BASIC6.51□□□□□ -1.37
Shank3Q4ACU6 Gm22758-201ENSMUST00000102275 96 ntBASIC6.51□□□□□ -1.37
Shank3Q4ACU6 Gm24170-201ENSMUST00000104124 133 ntBASIC6.51□□□□□ -1.37
Shank3Q4ACU6 Gm23608-201ENSMUST00000104545 128 ntBASIC6.51□□□□□ -1.37
Shank3Q4ACU6 Gm15517-201ENSMUST00000124863 251 ntAPPRIS P1 TSL 1 (best) BASIC6.51□□□□□ -1.37
Shank3Q4ACU6 Gm11958-201ENSMUST00000127224 253 ntTSL 5 BASIC6.51□□□□□ -1.37
Shank3Q4ACU6 Gm15245-201ENSMUST00000129410 1186 ntTSL 1 (best) BASIC6.51□□□□□ -1.37
Shank3Q4ACU6 Olfr75-ps1-201ENSMUST00000135477 938 ntBASIC6.51□□□□□ -1.37
Shank3Q4ACU6 Gm16213-201ENSMUST00000160076 639 ntTSL 1 (best) BASIC6.51□□□□□ -1.37
Shank3Q4ACU6 Mir6416-201ENSMUST00000183664 117 ntBASIC6.51□□□□□ -1.37
Shank3Q4ACU6 Gm38011-201ENSMUST00000193312 279 ntBASIC6.51□□□□□ -1.37
Shank3Q4ACU6 Gm32453-201ENSMUST00000204183 456 ntBASIC6.51□□□□□ -1.37
Shank3Q4ACU6 Olfr603-202ENSMUST00000218246 1021 ntAPPRIS P1 TSL 5 BASIC6.51□□□□□ -1.37
Shank3Q4ACU6 9530050K03Rik-201ENSMUST00000221663 1299 ntBASIC6.51□□□□□ -1.37
Shank3Q4ACU6 9430031K09Rik-201ENSMUST00000222913 925 ntBASIC6.51□□□□□ -1.37
Shank3Q4ACU6 Icos-201ENSMUST00000027162 810 ntAPPRIS ALT2 TSL 1 (best) BASIC6.51□□□□□ -1.37
Shank3Q4ACU6 Plce1-203ENSMUST00000182267 7234 ntAPPRIS ALT2 TSL 1 (best) BASIC6.51□□□□□ -1.37
Shank3Q4ACU6 Kat6b-ps1-201ENSMUST00000187624 3433 ntBASIC6.51□□□□□ -1.37
Shank3Q4ACU6 Ncoa7-203ENSMUST00000213836 2989 ntAPPRIS ALT2 TSL 1 (best) BASIC6.51□□□□□ -1.37
Shank3Q4ACU6 AC103672.2-201ENSMUST00000228146 1687 ntBASIC6.51□□□□□ -1.37
Shank3Q4ACU6 Pabpc4l-201ENSMUST00000166505 5218 ntAPPRIS P1 TSL 2 BASIC6.51□□□□□ -1.37
Shank3Q4ACU6 Gm45477-201ENSMUST00000200213 5498 ntBASIC6.51□□□□□ -1.37
Shank3Q4ACU6 AC190403.1-201ENSMUST00000224515 1325 ntBASIC6.51□□□□□ -1.37
Shank3Q4ACU6 Olfr473-202ENSMUST00000217618 2319 ntAPPRIS P1 TSL 2 BASIC6.51□□□□□ -1.37
Shank3Q4ACU6 Lmbrd2-204ENSMUST00000227556 8099 ntAPPRIS P1 BASIC6.51□□□□□ -1.37
Shank3Q4ACU6 Vmn2r1-201ENSMUST00000029406 2739 ntAPPRIS P1 TSL 1 (best) BASIC6.51□□□□□ -1.37
Shank3Q4ACU6 Sox6-201ENSMUST00000072804 8227 ntAPPRIS P4 TSL 1 (best) BASIC6.5□□□□□ -1.37
Shank3Q4ACU6 Csn1s2b-203ENSMUST00000113279 745 ntAPPRIS ALT2 TSL 1 (best) BASIC6.5□□□□□ -1.37
Shank3Q4ACU6 Vps29-203ENSMUST00000118765 713 ntTSL 3 BASIC6.5□□□□□ -1.37
Shank3Q4ACU6 n-R5s61-201ENSMUST00000122711 118 ntBASIC6.5□□□□□ -1.37
Shank3Q4ACU6 Gm14011-201ENSMUST00000145178 302 ntTSL 2 BASIC6.5□□□□□ -1.37
Shank3Q4ACU6 Gm24745-201ENSMUST00000157840 85 ntBASIC6.5□□□□□ -1.37
Shank3Q4ACU6 Gm26652-201ENSMUST00000180592 373 ntTSL 3 BASIC6.5□□□□□ -1.37
Shank3Q4ACU6 A930005H10Rik-205ENSMUST00000187055 436 ntTSL 3 BASIC6.5□□□□□ -1.37
Shank3Q4ACU6 Gm7967-201ENSMUST00000190991 399 ntTSL 3 BASIC6.5□□□□□ -1.37
Shank3Q4ACU6 Fbxw27-201ENSMUST00000197125 810 ntAPPRIS P2 TSL 3 BASIC6.5□□□□□ -1.37
Shank3Q4ACU6 AL645522.1-201ENSMUST00000197692 104 ntBASIC6.5□□□□□ -1.37
Shank3Q4ACU6 Gm44138-201ENSMUST00000204939 271 ntBASIC6.5□□□□□ -1.37
Shank3Q4ACU6 Ankrd42-207ENSMUST00000207131 1220 ntTSL 1 (best) BASIC6.5□□□□□ -1.37
Shank3Q4ACU6 Gm45702-201ENSMUST00000211856 644 ntTSL 2 BASIC6.5□□□□□ -1.37
Shank3Q4ACU6 Gm30676-201ENSMUST00000214000 1165 ntTSL 5 BASIC6.5□□□□□ -1.37
Shank3Q4ACU6 BC049715-201ENSMUST00000052702 1120 ntAPPRIS P1 TSL 1 (best) BASIC6.5□□□□□ -1.37
Shank3Q4ACU6 Meig1-201ENSMUST00000064685 706 ntAPPRIS P1 TSL 1 (best) BASIC6.5□□□□□ -1.37
Shank3Q4ACU6 Vmn2r24-201ENSMUST00000075095 2565 ntAPPRIS P1 TSL 5 BASIC6.5□□□□□ -1.37
Shank3Q4ACU6 Pls3-202ENSMUST00000114057 3160 ntAPPRIS P1 TSL 1 (best) BASIC6.5□□□□□ -1.37
Shank3Q4ACU6 Angel2-201ENSMUST00000027947 3562 ntTSL 1 (best) BASIC6.5□□□□□ -1.37
Shank3Q4ACU6 Brd8-203ENSMUST00000115765 3869 ntTSL 1 (best) BASIC6.5□□□□□ -1.37
Shank3Q4ACU6 Pja2-202ENSMUST00000024889 4345 ntAPPRIS ALT2 TSL 1 (best) BASIC6.5□□□□□ -1.37
Shank3Q4ACU6 CT025660.2-201ENSMUST00000217654 3539 ntTSL 1 (best) BASIC6.5□□□□□ -1.37
Shank3Q4ACU6 Cfap221-201ENSMUST00000037840 2511 ntAPPRIS P1 TSL 1 (best) BASIC6.5□□□□□ -1.37
Shank3Q4ACU6 Zfp708-203ENSMUST00000190566 2406 ntTSL 1 (best) BASIC6.5□□□□□ -1.37
Retrieved 100 of 76,532 protein–RNA pairs in 85.4 ms