Protein–RNA interactions for Protein: Q07424

Cdx4, Homeobox protein CDX-4, mousemouse

Predictions only

Length 282 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdx4Q07424 Gm25839-201ENSMUST00000158921 103 ntBASIC4.75□□□□□ -1.65
Cdx4Q07424 1700129C05Rik-202ENSMUST00000159858 784 ntAPPRIS ALT2 TSL 5 BASIC4.75□□□□□ -1.65
Cdx4Q07424 4933417A18Rik-201ENSMUST00000160279 1045 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
Cdx4Q07424 Gm15508-201ENSMUST00000160330 325 ntBASIC4.75□□□□□ -1.65
Cdx4Q07424 Gm8323-201ENSMUST00000168436 1201 ntBASIC4.75□□□□□ -1.65
Cdx4Q07424 Gm17121-201ENSMUST00000170414 847 ntBASIC4.75□□□□□ -1.65
Cdx4Q07424 Obox4-ps38-201ENSMUST00000175961 724 ntBASIC4.75□□□□□ -1.65
Cdx4Q07424 Gm23145-201ENSMUST00000178912 79 ntBASIC4.75□□□□□ -1.65
Cdx4Q07424 Gm5473-201ENSMUST00000179326 642 ntBASIC4.75□□□□□ -1.65
Cdx4Q07424 Gm2871-201ENSMUST00000179984 1204 ntBASIC4.75□□□□□ -1.65
Cdx4Q07424 Gm17222-201ENSMUST00000180135 847 ntBASIC4.75□□□□□ -1.65
Cdx4Q07424 Gm28885-201ENSMUST00000185615 563 ntBASIC4.75□□□□□ -1.65
Cdx4Q07424 Anapc13-202ENSMUST00000186693 595 ntAPPRIS P1 TSL 2 BASIC4.75□□□□□ -1.65
Cdx4Q07424 1810007C17Rik-201ENSMUST00000187665 710 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
Cdx4Q07424 Fabp9-202ENSMUST00000191678 647 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
Cdx4Q07424 Gm17953-201ENSMUST00000192061 667 ntBASIC4.75□□□□□ -1.65
Cdx4Q07424 Gm37974-201ENSMUST00000193668 220 ntTSL 3 BASIC4.75□□□□□ -1.65
Cdx4Q07424 Gm37477-201ENSMUST00000195215 884 ntBASIC4.75□□□□□ -1.65
Cdx4Q07424 Csn2-202ENSMUST00000196163 722 ntAPPRIS ALT2 TSL 5 BASIC4.75□□□□□ -1.65
Cdx4Q07424 Gm44761-201ENSMUST00000209080 440 ntTSL 2 BASIC4.75□□□□□ -1.65
Cdx4Q07424 Olfr529-ps1-201ENSMUST00000211097 928 ntBASIC4.75□□□□□ -1.65
Cdx4Q07424 Gm45639-201ENSMUST00000211205 710 ntTSL 5 BASIC4.75□□□□□ -1.65
Cdx4Q07424 4930503L19Rik-202ENSMUST00000211817 913 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
Cdx4Q07424 CT033754.1-201ENSMUST00000216941 531 ntTSL 3 BASIC4.75□□□□□ -1.65
Cdx4Q07424 AC147782.1-201ENSMUST00000219169 475 ntBASIC4.75□□□□□ -1.65
Cdx4Q07424 AC154481.1-201ENSMUST00000223532 331 ntBASIC4.75□□□□□ -1.65
Cdx4Q07424 3830408C21Rik-203ENSMUST00000224293 822 ntBASIC4.75□□□□□ -1.65
Cdx4Q07424 AC154431.2-201ENSMUST00000225215 1055 ntBASIC4.75□□□□□ -1.65
Cdx4Q07424 AC113031.1-201ENSMUST00000227400 432 ntBASIC4.75□□□□□ -1.65
Cdx4Q07424 AC159979.1-201ENSMUST00000227927 342 ntBASIC4.75□□□□□ -1.65
Cdx4Q07424 AC152394.2-202ENSMUST00000228503 1064 ntBASIC4.75□□□□□ -1.65
Cdx4Q07424 AC121114.1-201ENSMUST00000228522 570 ntBASIC4.75□□□□□ -1.65
Cdx4Q07424 Olfr1008-201ENSMUST00000054868 942 ntAPPRIS P1 BASIC4.75□□□□□ -1.65
Cdx4Q07424 Olfr827-201ENSMUST00000058123 1058 ntAPPRIS P1 BASIC4.75□□□□□ -1.65
Cdx4Q07424 Sprr2k-201ENSMUST00000067102 637 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
Cdx4Q07424 Mup20-201ENSMUST00000074018 928 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
Cdx4Q07424 Olfr166-201ENSMUST00000074739 1040 ntAPPRIS P1 BASIC4.75□□□□□ -1.65
Cdx4Q07424 Gm22043-201ENSMUST00000082993 158 ntBASIC4.75□□□□□ -1.65
Cdx4Q07424 Mup18-201ENSMUST00000098040 930 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
Cdx4Q07424 Mup11-202ENSMUST00000098046 930 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
Cdx4Q07424 Mup10-201ENSMUST00000098047 927 ntAPPRIS P1 TSL 2 BASIC4.75□□□□□ -1.65
Cdx4Q07424 Gm20362-201ENSMUST00000204808 2072 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
Cdx4Q07424 5330409N07Rik-201ENSMUST00000222069 3518 ntBASIC4.75□□□□□ -1.65
Cdx4Q07424 Olfr132-202ENSMUST00000216804 1913 ntAPPRIS P1 TSL 5 BASIC4.75□□□□□ -1.65
Cdx4Q07424 Gm14988-201ENSMUST00000117224 1548 ntBASIC4.75□□□□□ -1.65
Cdx4Q07424 Gm37911-201ENSMUST00000193099 1545 ntBASIC4.75□□□□□ -1.65
Cdx4Q07424 Larp4-201ENSMUST00000057632 6527 ntAPPRIS ALT2 TSL 1 (best) BASIC4.75□□□□□ -1.65
Cdx4Q07424 Pola1-201ENSMUST00000006856 5346 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
Cdx4Q07424 Irgm2-202ENSMUST00000108836 3459 ntAPPRIS P2 TSL 1 (best) BASIC4.75□□□□□ -1.65
Cdx4Q07424 Irgm2-201ENSMUST00000058704 3470 ntAPPRIS P2 TSL 2 BASIC4.75□□□□□ -1.65
Cdx4Q07424 Il1b-201ENSMUST00000028881 1356 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
Cdx4Q07424 Vmn2r-ps21-201ENSMUST00000177115 2947 ntBASIC4.75□□□□□ -1.65
Cdx4Q07424 Zfp955b-201ENSMUST00000099414 1638 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
Cdx4Q07424 Sytl2-206ENSMUST00000190731 3838 ntAPPRIS ALT2 TSL 1 (best) BASIC4.75□□□□□ -1.65
Cdx4Q07424 Olfr357-202ENSMUST00000213218 5367 ntAPPRIS P1 TSL 5 BASIC4.75□□□□□ -1.65
Cdx4Q07424 Tsga10-201ENSMUST00000041815 3400 ntAPPRIS P3 TSL 1 (best) BASIC4.75□□□□□ -1.65
Cdx4Q07424 Gria4-204ENSMUST00000212533 5207 ntAPPRIS ALT1 TSL 1 (best) BASIC4.75□□□□□ -1.65
Cdx4Q07424 Cd209a-201ENSMUST00000012847 1482 ntAPPRIS P2 TSL 1 (best) BASIC4.75□□□□□ -1.65
Cdx4Q07424 Ccdc7a-205ENSMUST00000214889 5544 ntAPPRIS ALT2 TSL 5 BASIC4.74□□□□□ -1.65
Cdx4Q07424 Oat-rs1-201ENSMUST00000122186 1311 ntBASIC4.74□□□□□ -1.65
Cdx4Q07424 Ndst3-203ENSMUST00000132112 4460 ntTSL 1 (best) BASIC4.74□□□□□ -1.65
Cdx4Q07424 Ehf-201ENSMUST00000090475 4469 ntAPPRIS P1 TSL 1 (best) BASIC4.74□□□□□ -1.65
Cdx4Q07424 D130004A15Rik-201ENSMUST00000201492 1577 ntBASIC4.74□□□□□ -1.65
Cdx4Q07424 Gm38124-201ENSMUST00000191710 2581 ntBASIC4.74□□□□□ -1.65
Cdx4Q07424 Vmn2r73-201ENSMUST00000077478 2556 ntAPPRIS P1 TSL 5 BASIC4.74□□□□□ -1.65
Cdx4Q07424 Zfp27-205ENSMUST00000162592 3845 ntAPPRIS P1 TSL 1 (best) BASIC4.74□□□□□ -1.65
Cdx4Q07424 AC162908.1-201ENSMUST00000219164 4563 ntBASIC4.74□□□□□ -1.65
Cdx4Q07424 Mbnl1-214ENSMUST00000193517 5151 ntAPPRIS ALT1 TSL 5 BASIC4.74□□□□□ -1.65
Cdx4Q07424 Gm37140-201ENSMUST00000192914 1684 ntBASIC4.74□□□□□ -1.65
Cdx4Q07424 Dcdc2c-204ENSMUST00000189735 1434 ntTSL 1 (best) BASIC4.74□□□□□ -1.65
Cdx4Q07424 Mat2a-206ENSMUST00000206692 1400 ntTSL 1 (best) BASIC4.74□□□□□ -1.65
Cdx4Q07424 A230103L15Rik-201ENSMUST00000207198 3872 ntBASIC4.74□□□□□ -1.65
Cdx4Q07424 Agtpbp1-202ENSMUST00000109830 2879 ntTSL 1 (best) BASIC4.74□□□□□ -1.65
Cdx4Q07424 Gm20276-201ENSMUST00000216122 2648 ntBASIC4.74□□□□□ -1.65
Cdx4Q07424 Gm17690-201ENSMUST00000180958 3467 ntTSL 1 (best) BASIC4.74□□□□□ -1.65
Cdx4Q07424 Dmtf1-202ENSMUST00000095017 3498 ntTSL 1 (best) BASIC4.74□□□□□ -1.65
Cdx4Q07424 Tnfaip3-202ENSMUST00000105527 4334 ntAPPRIS P1 TSL 1 (best) BASIC4.74□□□□□ -1.65
Cdx4Q07424 Trbv4-201ENSMUST00000103265 393 ntAPPRIS P1 BASIC4.74□□□□□ -1.65
Cdx4Q07424 Igkv15-103-201ENSMUST00000103324 375 ntAPPRIS P1 BASIC4.74□□□□□ -1.65
Cdx4Q07424 Gm25346-201ENSMUST00000104509 128 ntBASIC4.74□□□□□ -1.65
Cdx4Q07424 Skint8-201ENSMUST00000106572 1290 ntAPPRIS ALT2 TSL 5 BASIC4.74□□□□□ -1.65
Cdx4Q07424 Lrrc51-205ENSMUST00000106965 743 ntTSL 3 BASIC4.74□□□□□ -1.65
Cdx4Q07424 Gm15110-201ENSMUST00000117545 881 ntBASIC4.74□□□□□ -1.65
Cdx4Q07424 Gm14411-201ENSMUST00000121798 914 ntBASIC4.74□□□□□ -1.65
Cdx4Q07424 Gm22276-201ENSMUST00000122469 129 ntBASIC4.74□□□□□ -1.65
Cdx4Q07424 Gm15522-201ENSMUST00000134467 785 ntTSL 1 (best) BASIC4.74□□□□□ -1.65
Cdx4Q07424 Gm26159-201ENSMUST00000158968 104 ntBASIC4.74□□□□□ -1.65
Cdx4Q07424 Gm15995-201ENSMUST00000159897 574 ntTSL 5 BASIC4.74□□□□□ -1.65
Cdx4Q07424 Gm20490-201ENSMUST00000173622 198 ntTSL 5 BASIC4.74□□□□□ -1.65
Cdx4Q07424 Gm22548-201ENSMUST00000174899 78 ntBASIC4.74□□□□□ -1.65
Cdx4Q07424 Gm2042-202ENSMUST00000180706 1059 ntAPPRIS ALT2 TSL 1 (best) BASIC4.74□□□□□ -1.65
Cdx4Q07424 Gm27853-201ENSMUST00000184176 250 ntBASIC4.74□□□□□ -1.65
Cdx4Q07424 Gm29263-201ENSMUST00000188718 463 ntBASIC4.74□□□□□ -1.65
Cdx4Q07424 2310008N11Rik-201ENSMUST00000189978 568 ntTSL 1 (best) BASIC4.74□□□□□ -1.65
Cdx4Q07424 Igkv12-67-201ENSMUST00000197806 354 ntBASIC4.74□□□□□ -1.65
Cdx4Q07424 Gm29745-201ENSMUST00000198005 687 ntBASIC4.74□□□□□ -1.65
Cdx4Q07424 Gm43233-201ENSMUST00000200491 616 ntBASIC4.74□□□□□ -1.65
Cdx4Q07424 Gm3321-201ENSMUST00000200603 1129 ntBASIC4.74□□□□□ -1.65
Cdx4Q07424 Gm43227-201ENSMUST00000202239 677 ntBASIC4.74□□□□□ -1.65
Cdx4Q07424 Gm43954-201ENSMUST00000204634 544 ntBASIC4.74□□□□□ -1.65
Retrieved 100 of 76,532 protein–RNA pairs in 89.9 ms