Protein–RNA interactions for Protein: Q00780

Col8a1, Collagen alpha-1(VIII) chain, mousemouse

Predictions only

Length 744 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col8a1Q00780 Gm25221-201ENSMUST00000180051 79 ntBASIC5.49□□□□□ -1.53
Col8a1Q00780 Mir7006-201ENSMUST00000183624 69 ntBASIC5.49□□□□□ -1.53
Col8a1Q00780 Gm28779-201ENSMUST00000189678 323 ntBASIC5.49□□□□□ -1.53
Col8a1Q00780 Scgb2b5-ps-201ENSMUST00000190227 270 ntBASIC5.49□□□□□ -1.53
Col8a1Q00780 Gm33819-201ENSMUST00000194008 1221 ntTSL 3 BASIC5.49□□□□□ -1.53
Col8a1Q00780 Gm37712-201ENSMUST00000194295 647 ntTSL 3 BASIC5.49□□□□□ -1.53
Col8a1Q00780 Gm2077-201ENSMUST00000195017 319 ntBASIC5.49□□□□□ -1.53
Col8a1Q00780 Gm38334-201ENSMUST00000195060 313 ntBASIC5.49□□□□□ -1.53
Col8a1Q00780 Gm4332-201ENSMUST00000196114 346 ntBASIC5.49□□□□□ -1.53
Col8a1Q00780 AC157822.1-201ENSMUST00000196643 80 ntBASIC5.49□□□□□ -1.53
Col8a1Q00780 Gm44265-201ENSMUST00000203631 465 ntBASIC5.49□□□□□ -1.53
Col8a1Q00780 Gm17984-201ENSMUST00000205286 859 ntBASIC5.49□□□□□ -1.53
Col8a1Q00780 Olfr494-202ENSMUST00000210291 947 ntAPPRIS P1 BASIC5.49□□□□□ -1.53
Col8a1Q00780 LOC665443-201ENSMUST00000212284 796 ntBASIC5.49□□□□□ -1.53
Col8a1Q00780 Gm30606-201ENSMUST00000212801 847 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
Col8a1Q00780 AC145731.1-201ENSMUST00000214083 344 ntTSL 5 BASIC5.49□□□□□ -1.53
Col8a1Q00780 Gm17950-201ENSMUST00000214617 646 ntBASIC5.49□□□□□ -1.53
Col8a1Q00780 AC123832.2-201ENSMUST00000215151 129 ntBASIC5.49□□□□□ -1.53
Col8a1Q00780 5330439M10Rik-201ENSMUST00000218667 348 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
Col8a1Q00780 AC156950.1-201ENSMUST00000219604 456 ntBASIC5.49□□□□□ -1.53
Col8a1Q00780 AC147256.1-201ENSMUST00000221589 626 ntTSL 3 BASIC5.49□□□□□ -1.53
Col8a1Q00780 AC192333.1-201ENSMUST00000224573 376 ntBASIC5.49□□□□□ -1.53
Col8a1Q00780 AC154506.3-201ENSMUST00000225417 213 ntBASIC5.49□□□□□ -1.53
Col8a1Q00780 AC146601.1-201ENSMUST00000227910 905 ntBASIC5.49□□□□□ -1.53
Col8a1Q00780 AC154563.1-201ENSMUST00000228317 442 ntBASIC5.49□□□□□ -1.53
Col8a1Q00780 Vmn1r89-201ENSMUST00000053008 951 ntAPPRIS P2 BASIC5.49□□□□□ -1.53
Col8a1Q00780 Vmn1r236-201ENSMUST00000066998 1121 ntAPPRIS P1 BASIC5.49□□□□□ -1.53
Col8a1Q00780 Olfr150-201ENSMUST00000078557 939 ntAPPRIS P1 BASIC5.49□□□□□ -1.53
Col8a1Q00780 Rny3-201ENSMUST00000083011 102 ntBASIC5.49□□□□□ -1.53
Col8a1Q00780 Gm24454-201ENSMUST00000083349 132 ntBASIC5.49□□□□□ -1.53
Col8a1Q00780 Gm24765-201ENSMUST00000083691 103 ntBASIC5.49□□□□□ -1.53
Col8a1Q00780 Gm25005-201ENSMUST00000083812 156 ntBASIC5.49□□□□□ -1.53
Col8a1Q00780 Gm37347-201ENSMUST00000193969 3071 ntBASIC5.49□□□□□ -1.53
Col8a1Q00780 Gm1698-201ENSMUST00000136749 2313 ntTSL 2 BASIC5.49□□□□□ -1.53
Col8a1Q00780 Dmtf1-207ENSMUST00000183973 2408 ntAPPRIS ALT1 TSL 5 BASIC5.49□□□□□ -1.53
Col8a1Q00780 Gm28278-201ENSMUST00000185603 1499 ntTSL 5 BASIC5.49□□□□□ -1.53
Col8a1Q00780 Serpinb3c-201ENSMUST00000027565 1659 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
Col8a1Q00780 Gm45163-201ENSMUST00000207606 3987 ntTSL 5 BASIC5.49□□□□□ -1.53
Col8a1Q00780 5830405F06Rik-201ENSMUST00000192753 1755 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
Col8a1Q00780 Ccl9-201ENSMUST00000019266 3006 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
Col8a1Q00780 Gm43577-201ENSMUST00000197090 3344 ntBASIC5.49□□□□□ -1.53
Col8a1Q00780 Adgrl3-203ENSMUST00000117253 4764 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
Col8a1Q00780 Dach2-202ENSMUST00000113378 2089 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
Col8a1Q00780 Serpind1-202ENSMUST00000161034 2051 ntAPPRIS P1 TSL 5 BASIC5.49□□□□□ -1.53
Col8a1Q00780 Mybpc1-202ENSMUST00000121629 3922 ntAPPRIS P3 TSL 1 (best) BASIC5.49□□□□□ -1.53
Col8a1Q00780 Mettl6-201ENSMUST00000055303 3946 ntAPPRIS P2 TSL 1 (best) BASIC5.49□□□□□ -1.53
Col8a1Q00780 Ptprc-204ENSMUST00000182755 4611 ntAPPRIS ALT2 TSL 1 (best) BASIC5.49□□□□□ -1.53
Col8a1Q00780 Gm28379-202ENSMUST00000187676 2896 ntBASIC5.49□□□□□ -1.53
Col8a1Q00780 Gm44620-201ENSMUST00000209183 2887 ntBASIC5.49□□□□□ -1.53
Col8a1Q00780 Gm37936-201ENSMUST00000194647 1322 ntBASIC5.48□□□□□ -1.53
Col8a1Q00780 AC121094.1-201ENSMUST00000224766 1345 ntBASIC5.48□□□□□ -1.53
Col8a1Q00780 Gm43029-201ENSMUST00000201829 1535 ntBASIC5.48□□□□□ -1.53
Col8a1Q00780 Gm18880-201ENSMUST00000223333 1541 ntBASIC5.48□□□□□ -1.53
Col8a1Q00780 Gm37181-201ENSMUST00000192513 1727 ntBASIC5.48□□□□□ -1.53
Col8a1Q00780 Gm12289-201ENSMUST00000130860 2235 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
Col8a1Q00780 Sytl4-203ENSMUST00000113297 3306 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
Col8a1Q00780 D330045A20Rik-202ENSMUST00000113030 3736 ntAPPRIS P3 TSL 1 (best) BASIC5.48□□□□□ -1.53
Col8a1Q00780 Ap1g1-201ENSMUST00000034171 3692 ntAPPRIS ALT1 TSL 1 (best) BASIC5.48□□□□□ -1.53
Col8a1Q00780 Sprr2a3-202ENSMUST00000193337 2880 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
Col8a1Q00780 Redrum-201ENSMUST00000181269 1774 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
Col8a1Q00780 Gm13854-201ENSMUST00000121183 1679 ntBASIC5.48□□□□□ -1.53
Col8a1Q00780 Gm10033-204ENSMUST00000213012 7778 ntTSL 3 BASIC5.48□□□□□ -1.53
Col8a1Q00780 Rps15a-201ENSMUST00000106588 640 ntAPPRIS P1 TSL 3 BASIC5.48□□□□□ -1.53
Col8a1Q00780 Gng2-ps1-201ENSMUST00000120523 217 ntBASIC5.48□□□□□ -1.53
Col8a1Q00780 4933406K04Rik-202ENSMUST00000124363 1064 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
Col8a1Q00780 Gm16144-201ENSMUST00000131093 827 ntTSL 2 BASIC5.48□□□□□ -1.53
Col8a1Q00780 AI662270-201ENSMUST00000142709 304 ntTSL 2 BASIC5.48□□□□□ -1.53
Col8a1Q00780 Gm4997-201ENSMUST00000154056 360 ntBASIC5.48□□□□□ -1.53
Col8a1Q00780 Gm13727-201ENSMUST00000154480 424 ntTSL 3 BASIC5.48□□□□□ -1.53
Col8a1Q00780 Gm23981-201ENSMUST00000157136 106 ntBASIC5.48□□□□□ -1.53
Col8a1Q00780 Gm23071-201ENSMUST00000158242 115 ntBASIC5.48□□□□□ -1.53
Col8a1Q00780 Gm16134-201ENSMUST00000161714 336 ntBASIC5.48□□□□□ -1.53
Col8a1Q00780 Gstm5-202ENSMUST00000167387 599 ntTSL 5 BASIC5.48□□□□□ -1.53
Col8a1Q00780 Gm3727-201ENSMUST00000168458 995 ntAPPRIS P5 TSL 5 BASIC5.48□□□□□ -1.53
Col8a1Q00780 Gm7346-201ENSMUST00000169661 476 ntBASIC5.48□□□□□ -1.53
Col8a1Q00780 Rpl28-ps4-201ENSMUST00000170447 377 ntBASIC5.48□□□□□ -1.53
Col8a1Q00780 Gm6647-201ENSMUST00000170514 641 ntBASIC5.48□□□□□ -1.53
Col8a1Q00780 Gm23806-201ENSMUST00000175157 109 ntBASIC5.48□□□□□ -1.53
Col8a1Q00780 Gm24080-201ENSMUST00000175178 232 ntBASIC5.48□□□□□ -1.53
Col8a1Q00780 1700010L04Rik-203ENSMUST00000179662 1015 ntTSL 5 BASIC5.48□□□□□ -1.53
Col8a1Q00780 Gm21171-201ENSMUST00000180048 673 ntBASIC5.48□□□□□ -1.53
Col8a1Q00780 Rpl9-ps1-202ENSMUST00000182502 576 ntAPPRIS P1 BASIC5.48□□□□□ -1.53
Col8a1Q00780 Lockd-204ENSMUST00000184991 243 ntTSL 5 BASIC5.48□□□□□ -1.53
Col8a1Q00780 Gm29082-201ENSMUST00000185207 448 ntTSL 5 BASIC5.48□□□□□ -1.53
Col8a1Q00780 Gm29060-201ENSMUST00000185339 457 ntTSL 5 BASIC5.48□□□□□ -1.53
Col8a1Q00780 Gm28887-201ENSMUST00000186065 294 ntTSL 5 BASIC5.48□□□□□ -1.53
Col8a1Q00780 Gm28664-201ENSMUST00000186118 457 ntTSL 5 BASIC5.48□□□□□ -1.53
Col8a1Q00780 Gm29209-201ENSMUST00000188176 457 ntTSL 5 BASIC5.48□□□□□ -1.53
Col8a1Q00780 Gm29090-201ENSMUST00000188526 457 ntTSL 5 BASIC5.48□□□□□ -1.53
Col8a1Q00780 Gm28080-201ENSMUST00000188552 722 ntBASIC5.48□□□□□ -1.53
Col8a1Q00780 Gm8403-201ENSMUST00000189712 1298 ntBASIC5.48□□□□□ -1.53
Col8a1Q00780 Gm28492-201ENSMUST00000190899 1019 ntBASIC5.48□□□□□ -1.53
Col8a1Q00780 Gm37098-201ENSMUST00000192290 244 ntBASIC5.48□□□□□ -1.53
Col8a1Q00780 Gm42437-201ENSMUST00000197263 923 ntBASIC5.48□□□□□ -1.53
Col8a1Q00780 Gm36548-202ENSMUST00000200222 494 ntTSL 5 BASIC5.48□□□□□ -1.53
Col8a1Q00780 U90926-202ENSMUST00000201332 524 ntAPPRIS P5 TSL 1 (best) BASIC5.48□□□□□ -1.53
Col8a1Q00780 1700065J11Rik-201ENSMUST00000201560 424 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
Col8a1Q00780 Gpr19-210ENSMUST00000203762 498 ntTSL 3 BASIC5.48□□□□□ -1.53
Col8a1Q00780 AC118476.1-201ENSMUST00000216237 349 ntTSL 3 BASIC5.48□□□□□ -1.53
Col8a1Q00780 Olfr929-ps1-201ENSMUST00000216338 585 ntBASIC5.48□□□□□ -1.53
Retrieved 100 of 76,532 protein–RNA pairs in 75.6 ms