Protein–RNA interactions for Protein: P79621

Ciita, MHC class II transactivator, mousemouse

Predictions only

Length 1,155 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CiitaP79621 Gm43175-201ENSMUST00000198450 3810 ntBASIC5.96□□□□□ -1.45
CiitaP79621 Lair1-202ENSMUST00000086400 3461 ntAPPRIS ALT2 TSL 5 BASIC5.96□□□□□ -1.45
CiitaP79621 Prrg1-210ENSMUST00000177904 3851 ntAPPRIS P1 TSL 2 BASIC5.96□□□□□ -1.46
CiitaP79621 Usp25-201ENSMUST00000023580 4412 ntAPPRIS P1 TSL 1 (best) BASIC5.96□□□□□ -1.46
CiitaP79621 Lgalsl-201ENSMUST00000047028 3362 ntAPPRIS P1 TSL 1 (best) BASIC5.96□□□□□ -1.46
CiitaP79621 Rbm46-202ENSMUST00000182637 2058 ntTSL 5 BASIC5.96□□□□□ -1.46
CiitaP79621 Olfr260-ps1-201ENSMUST00000117279 822 ntBASIC5.96□□□□□ -1.46
CiitaP79621 Gm14769-201ENSMUST00000118590 432 ntBASIC5.96□□□□□ -1.46
CiitaP79621 Gm15780-201ENSMUST00000121283 935 ntBASIC5.96□□□□□ -1.46
CiitaP79621 Crem-216ENSMUST00000136961 807 ntTSL 5 BASIC5.96□□□□□ -1.46
CiitaP79621 Gm11680-201ENSMUST00000146550 439 ntTSL 5 BASIC5.96□□□□□ -1.46
CiitaP79621 Ptprtos-201ENSMUST00000151688 630 ntTSL 1 (best) BASIC5.96□□□□□ -1.46
CiitaP79621 Gm12753-201ENSMUST00000152086 653 ntTSL 3 BASIC5.96□□□□□ -1.46
CiitaP79621 Gm26355-201ENSMUST00000158220 105 ntBASIC5.96□□□□□ -1.46
CiitaP79621 Gm26763-201ENSMUST00000180968 1093 ntTSL 1 (best) BASIC5.96□□□□□ -1.46
CiitaP79621 Gm19585-201ENSMUST00000186007 587 ntTSL 2 BASIC5.96□□□□□ -1.46
CiitaP79621 BE692007-201ENSMUST00000186054 954 ntTSL 1 (best) BASIC5.96□□□□□ -1.46
CiitaP79621 Gm29011-201ENSMUST00000191059 712 ntBASIC5.96□□□□□ -1.46
CiitaP79621 Gm28060-201ENSMUST00000191554 189 ntBASIC5.96□□□□□ -1.46
CiitaP79621 Gm42461-201ENSMUST00000198627 1150 ntBASIC5.96□□□□□ -1.46
CiitaP79621 A230098N10Rik-202ENSMUST00000200055 356 ntTSL 2 BASIC5.96□□□□□ -1.46
CiitaP79621 Gm43522-202ENSMUST00000200185 442 ntTSL 3 BASIC5.96□□□□□ -1.46
CiitaP79621 Nts-201ENSMUST00000020040 1248 ntAPPRIS P1 TSL 1 (best) BASIC5.96□□□□□ -1.46
CiitaP79621 Gm43629-201ENSMUST00000201782 704 ntBASIC5.96□□□□□ -1.46
CiitaP79621 Gm45700-201ENSMUST00000205866 347 ntBASIC5.96□□□□□ -1.46
CiitaP79621 Olfr928-ps1-201ENSMUST00000213313 237 ntBASIC5.96□□□□□ -1.46
CiitaP79621 Gm7768-201ENSMUST00000222988 597 ntBASIC5.96□□□□□ -1.46
CiitaP79621 Vmn1r16-201ENSMUST00000227168 912 ntAPPRIS P2 BASIC5.96□□□□□ -1.46
CiitaP79621 Defa17-201ENSMUST00000079528 397 ntAPPRIS P1 TSL 1 (best) BASIC5.96□□□□□ -1.46
CiitaP79621 Gm22971-201ENSMUST00000083305 97 ntBASIC5.96□□□□□ -1.46
CiitaP79621 Olfr739-202ENSMUST00000216949 3581 ntAPPRIS P1 TSL 5 BASIC5.96□□□□□ -1.46
CiitaP79621 Gm43154-208ENSMUST00000209658 1442 ntTSL 5 BASIC5.96□□□□□ -1.46
CiitaP79621 Gm42492-201ENSMUST00000195780 2915 ntBASIC5.96□□□□□ -1.46
CiitaP79621 Gm21292-201ENSMUST00000171947 1563 ntAPPRIS P1 BASIC5.96□□□□□ -1.46
CiitaP79621 Olfr829-202ENSMUST00000212229 2590 ntAPPRIS ALT2 TSL 5 BASIC5.96□□□□□ -1.46
CiitaP79621 Pum2-210ENSMUST00000169089 3295 ntAPPRIS ALT2 TSL 5 BASIC5.96□□□□□ -1.46
CiitaP79621 Gm38368-201ENSMUST00000193181 1335 ntBASIC5.96□□□□□ -1.46
CiitaP79621 Larp4-201ENSMUST00000057632 6527 ntAPPRIS ALT2 TSL 1 (best) BASIC5.96□□□□□ -1.46
CiitaP79621 Zbtb20-204ENSMUST00000114694 26901 ntAPPRIS P3 TSL 5 BASIC5.96□□□□□ -1.46
CiitaP79621 Epha4-204ENSMUST00000188797 3612 ntAPPRIS P1 TSL 1 (best) BASIC5.95□□□□□ -1.46
CiitaP79621 Gm14399-204ENSMUST00000109060 1911 ntAPPRIS P1 TSL 3 BASIC5.95□□□□□ -1.46
CiitaP79621 A530083M17Rik-201ENSMUST00000199877 3376 ntBASIC5.95□□□□□ -1.46
CiitaP79621 Olfr1171-ps1-202ENSMUST00000150178 1398 ntTSL 3 BASIC5.95□□□□□ -1.46
CiitaP79621 Cpa2-201ENSMUST00000096066 1388 ntAPPRIS P1 TSL 5 BASIC5.95□□□□□ -1.46
CiitaP79621 Cyp4a32-201ENSMUST00000084342 1530 ntAPPRIS P1 TSL 5 BASIC5.95□□□□□ -1.46
CiitaP79621 Dnah3-204ENSMUST00000209154 12265 ntAPPRIS P5 TSL 5 BASIC5.95□□□□□ -1.46
CiitaP79621 Zfp934-203ENSMUST00000220648 2439 ntTSL 5 BASIC5.95□□□□□ -1.46
CiitaP79621 Rgs17-204ENSMUST00000131996 8107 ntAPPRIS P1 TSL 1 (best) BASIC5.95□□□□□ -1.46
CiitaP79621 Gm12789-202ENSMUST00000106915 495 ntAPPRIS P1 TSL 3 BASIC5.95□□□□□ -1.46
CiitaP79621 Gm14601-201ENSMUST00000120892 236 ntBASIC5.95□□□□□ -1.46
CiitaP79621 Gm11677-201ENSMUST00000121349 977 ntBASIC5.95□□□□□ -1.46
CiitaP79621 1700001G01Rik-201ENSMUST00000125117 1562 ntTSL 1 (best) BASIC5.95□□□□□ -1.46
CiitaP79621 Gm16208-201ENSMUST00000128476 471 ntTSL 1 (best) BASIC5.95□□□□□ -1.46
CiitaP79621 Gm15892-201ENSMUST00000152627 439 ntTSL 2 BASIC5.95□□□□□ -1.46
CiitaP79621 Gm25048-201ENSMUST00000158598 91 ntBASIC5.95□□□□□ -1.46
CiitaP79621 Gm22923-201ENSMUST00000174952 110 ntBASIC5.95□□□□□ -1.46
CiitaP79621 Pafah1b1-ps1-201ENSMUST00000181263 1046 ntBASIC5.95□□□□□ -1.46
CiitaP79621 Mir7087-201ENSMUST00000184840 70 ntBASIC5.95□□□□□ -1.46
CiitaP79621 D530049I02Rik-201ENSMUST00000186582 562 ntTSL 1 (best) BASIC5.95□□□□□ -1.46
CiitaP79621 Olfr1246-201ENSMUST00000187990 1078 ntAPPRIS P1 BASIC5.95□□□□□ -1.46
CiitaP79621 Gm37720-201ENSMUST00000195497 1241 ntBASIC5.95□□□□□ -1.46
CiitaP79621 Gm2142-201ENSMUST00000197899 589 ntBASIC5.95□□□□□ -1.46
CiitaP79621 Gm33050-201ENSMUST00000198132 501 ntTSL 1 (best) BASIC5.95□□□□□ -1.46
CiitaP79621 Igkv4-56-201ENSMUST00000198436 349 ntBASIC5.95□□□□□ -1.46
CiitaP79621 Gm44463-201ENSMUST00000198895 137 ntBASIC5.95□□□□□ -1.46
CiitaP79621 Gm43485-201ENSMUST00000199292 1710 ntBASIC5.95□□□□□ -1.46
CiitaP79621 Gm42640-201ENSMUST00000199792 1195 ntBASIC5.95□□□□□ -1.46
CiitaP79621 Gm7838-201ENSMUST00000203221 1189 ntBASIC5.95□□□□□ -1.46
CiitaP79621 Gm7688-201ENSMUST00000212857 337 ntBASIC5.95□□□□□ -1.46
CiitaP79621 AC155808.1-201ENSMUST00000219288 409 ntBASIC5.95□□□□□ -1.46
CiitaP79621 AC124732.4-201ENSMUST00000220930 1274 ntBASIC5.95□□□□□ -1.46
CiitaP79621 AL807824.1-201ENSMUST00000223151 183 ntBASIC5.95□□□□□ -1.46
CiitaP79621 Smr3a-201ENSMUST00000031211 635 ntAPPRIS P2 TSL 1 (best) BASIC5.95□□□□□ -1.46
CiitaP79621 Orm3-201ENSMUST00000006687 773 ntAPPRIS P1 TSL 5 BASIC5.95□□□□□ -1.46
CiitaP79621 Olfr871-201ENSMUST00000073122 1147 ntAPPRIS P1 BASIC5.95□□□□□ -1.46
CiitaP79621 Olfr1087-201ENSMUST00000099877 942 ntAPPRIS P1 BASIC5.95□□□□□ -1.46
CiitaP79621 Naip6-202ENSMUST00000118574 6827 ntAPPRIS P1 TSL 1 (best) BASIC5.95□□□□□ -1.46
CiitaP79621 Gm43359-201ENSMUST00000197944 2200 ntBASIC5.95□□□□□ -1.46
CiitaP79621 Map2-201ENSMUST00000024639 5195 ntTSL 5 BASIC5.95□□□□□ -1.46
CiitaP79621 Cfap61-207ENSMUST00000138774 3308 ntTSL 1 (best) BASIC5.95□□□□□ -1.46
CiitaP79621 Nme7-202ENSMUST00000191947 1635 ntAPPRIS P1 TSL 1 (best) BASIC5.95□□□□□ -1.46
CiitaP79621 Gm38189-201ENSMUST00000194495 1457 ntBASIC5.95□□□□□ -1.46
CiitaP79621 Olfr1281-202ENSMUST00000208176 4905 ntAPPRIS P1 TSL 2 BASIC5.95□□□□□ -1.46
CiitaP79621 Ktn1-207ENSMUST00000186761 3902 ntAPPRIS ALT2 TSL 5 BASIC5.94□□□□□ -1.46
CiitaP79621 Agbl2-202ENSMUST00000037219 3462 ntAPPRIS P2 TSL 1 (best) BASIC5.94□□□□□ -1.46
CiitaP79621 Gm38190-201ENSMUST00000192350 4755 ntBASIC5.94□□□□□ -1.46
CiitaP79621 Gm37769-201ENSMUST00000193753 2369 ntBASIC5.94□□□□□ -1.46
CiitaP79621 Vmn1r11-203ENSMUST00000228235 2376 ntAPPRIS ALT2 BASIC5.94□□□□□ -1.46
CiitaP79621 Vmn2r-ps38-201ENSMUST00000173752 2573 ntBASIC5.94□□□□□ -1.46
CiitaP79621 Elavl4-201ENSMUST00000102722 4107 ntAPPRIS P3 TSL 1 (best) BASIC5.94□□□□□ -1.46
CiitaP79621 Elavl4-203ENSMUST00000106597 4149 ntTSL 1 (best) BASIC5.94□□□□□ -1.46
CiitaP79621 Sptssb-201ENSMUST00000051239 1795 ntAPPRIS P1 TSL 1 (best) BASIC5.94□□□□□ -1.46
CiitaP79621 Mir1188-201ENSMUST00000116756 120 ntBASIC5.94□□□□□ -1.46
CiitaP79621 Gm11984-201ENSMUST00000118142 766 ntBASIC5.94□□□□□ -1.46
CiitaP79621 Gm13488-201ENSMUST00000120419 179 ntBASIC5.94□□□□□ -1.46
CiitaP79621 Zfp783-203ENSMUST00000130463 537 ntTSL 2 BASIC5.94□□□□□ -1.46
CiitaP79621 Gm15265-201ENSMUST00000133494 551 ntTSL 2 BASIC5.94□□□□□ -1.46
CiitaP79621 Gm15589-201ENSMUST00000144193 271 ntTSL 3 BASIC5.94□□□□□ -1.46
CiitaP79621 Olfr1038-ps-201ENSMUST00000149775 1209 ntAPPRIS P1 TSL 5 BASIC5.94□□□□□ -1.46
CiitaP79621 Tmem216-206ENSMUST00000154383 927 ntAPPRIS P1 TSL 3 BASIC5.94□□□□□ -1.46
Retrieved 100 of 76,532 protein–RNA pairs in 54.3 ms