Protein–RNA interactions for Protein: P48377

Rfx1, MHC class II regulatory factor RFX1, mousemouse

Predictions only

Length 963 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfx1P48377 Gm18863-201ENSMUST00000217004 1299 ntBASIC7.46□□□□□ -1.22
Rfx1P48377 AC122301.3-201ENSMUST00000217707 716 ntTSL 5 BASIC7.46□□□□□ -1.22
Rfx1P48377 AC124399.1-201ENSMUST00000218334 590 ntBASIC7.46□□□□□ -1.22
Rfx1P48377 AC116465.1-201ENSMUST00000220324 235 ntBASIC7.46□□□□□ -1.22
Rfx1P48377 AC122371.2-201ENSMUST00000220583 366 ntBASIC7.46□□□□□ -1.22
Rfx1P48377 AC163721.1-201ENSMUST00000222669 394 ntTSL 3 BASIC7.46□□□□□ -1.22
Rfx1P48377 AC170086.1-201ENSMUST00000225190 497 ntBASIC7.46□□□□□ -1.22
Rfx1P48377 AC122397.3-201ENSMUST00000227097 527 ntBASIC7.46□□□□□ -1.22
Rfx1P48377 AC144628.1-201ENSMUST00000227943 466 ntBASIC7.46□□□□□ -1.22
Rfx1P48377 AC168062.2-201ENSMUST00000228907 422 ntBASIC7.46□□□□□ -1.22
Rfx1P48377 Cd48-202ENSMUST00000068584 1186 ntAPPRIS P1 TSL 1 (best) BASIC7.46□□□□□ -1.22
Rfx1P48377 Olfr933-201ENSMUST00000075680 1003 ntAPPRIS P1 BASIC7.46□□□□□ -1.22
Rfx1P48377 Mup13-202ENSMUST00000098042 984 ntAPPRIS P3 TSL 5 BASIC7.46□□□□□ -1.22
Rfx1P48377 Olfr716-201ENSMUST00000098137 1104 ntAPPRIS P1 BASIC7.46□□□□□ -1.22
Rfx1P48377 Olfr1314-201ENSMUST00000099598 939 ntAPPRIS P1 BASIC7.46□□□□□ -1.22
Rfx1P48377 Gm29061-201ENSMUST00000185900 1499 ntTSL 5 BASIC7.46□□□□□ -1.22
Rfx1P48377 Gm29321-201ENSMUST00000186727 1499 ntTSL 5 BASIC7.46□□□□□ -1.22
Rfx1P48377 Dnah17-202ENSMUST00000084803 14889 ntAPPRIS P2 TSL 5 BASIC7.46□□□□□ -1.22
Rfx1P48377 AW554918-201ENSMUST00000036619 5257 ntAPPRIS P5 TSL 5 BASIC7.46□□□□□ -1.22
Rfx1P48377 AC155634.1-201ENSMUST00000221687 2706 ntTSL 1 (best) BASIC7.46□□□□□ -1.22
Rfx1P48377 4930431P03Rik-204ENSMUST00000228169 1967 ntBASIC7.46□□□□□ -1.22
Rfx1P48377 Trim2-204ENSMUST00000107692 7161 ntAPPRIS P1 TSL 1 (best) BASIC7.46□□□□□ -1.22
Rfx1P48377 Olfr401-202ENSMUST00000213754 2227 ntAPPRIS P1 TSL 5 BASIC7.46□□□□□ -1.22
Rfx1P48377 Olfr1163-202ENSMUST00000215268 1611 ntAPPRIS P1 TSL 5 BASIC7.45□□□□□ -1.22
Rfx1P48377 Cylc2-201ENSMUST00000041392 1641 ntAPPRIS P1 TSL 5 BASIC7.45□□□□□ -1.22
Rfx1P48377 Ifi205-201ENSMUST00000059226 1613 ntAPPRIS P1 TSL 1 (best) BASIC7.45□□□□□ -1.22
Rfx1P48377 Il1rapl1-201ENSMUST00000078875 2091 ntAPPRIS P1 TSL 5 BASIC7.45□□□□□ -1.22
Rfx1P48377 Gm43154-208ENSMUST00000209658 1442 ntTSL 5 BASIC7.45□□□□□ -1.22
Rfx1P48377 Sh3kbp1-202ENSMUST00000080394 2980 ntTSL 1 (best) BASIC7.45□□□□□ -1.22
Rfx1P48377 Cyp2j12-201ENSMUST00000097972 1675 ntAPPRIS P1 TSL 5 BASIC7.45□□□□□ -1.22
Rfx1P48377 Gm11674-201ENSMUST00000124855 3005 ntTSL 1 (best) BASIC7.45□□□□□ -1.22
Rfx1P48377 Gm37717-201ENSMUST00000192647 3027 ntBASIC7.45□□□□□ -1.22
Rfx1P48377 Rnf24-201ENSMUST00000059372 5978 ntAPPRIS P1 TSL 1 (best) BASIC7.45□□□□□ -1.22
Rfx1P48377 Gm20276-201ENSMUST00000216122 2648 ntBASIC7.45□□□□□ -1.22
Rfx1P48377 Trbv29-201ENSMUST00000103281 353 ntAPPRIS P1 BASIC7.45□□□□□ -1.22
Rfx1P48377 Igkv9-120-201ENSMUST00000103316 353 ntAPPRIS P1 BASIC7.45□□□□□ -1.22
Rfx1P48377 Iglc2-201ENSMUST00000103749 606 ntAPPRIS ALT2 TSL 1 (best) BASIC7.45□□□□□ -1.22
Rfx1P48377 Gm22591-201ENSMUST00000104243 106 ntBASIC7.45□□□□□ -1.22
Rfx1P48377 Mup6-201ENSMUST00000107517 926 ntAPPRIS P1 TSL 5 BASIC7.45□□□□□ -1.22
Rfx1P48377 Mup6-202ENSMUST00000107520 540 ntAPPRIS P1 TSL 5 BASIC7.45□□□□□ -1.22
Rfx1P48377 Gm15108-201ENSMUST00000116160 803 ntBASIC7.45□□□□□ -1.22
Rfx1P48377 Gm13768-201ENSMUST00000116469 929 ntBASIC7.45□□□□□ -1.22
Rfx1P48377 Gm23987-201ENSMUST00000117039 129 ntBASIC7.45□□□□□ -1.22
Rfx1P48377 Gm12814-201ENSMUST00000117091 846 ntBASIC7.45□□□□□ -1.22
Rfx1P48377 Gm14382-201ENSMUST00000117374 437 ntBASIC7.45□□□□□ -1.22
Rfx1P48377 Gm14733-201ENSMUST00000117680 133 ntBASIC7.45□□□□□ -1.22
Rfx1P48377 Gm11501-201ENSMUST00000118039 581 ntBASIC7.45□□□□□ -1.22
Rfx1P48377 Gm14614-201ENSMUST00000119873 384 ntBASIC7.45□□□□□ -1.22
Rfx1P48377 Nlk-ps1-201ENSMUST00000120843 1230 ntBASIC7.45□□□□□ -1.22
Rfx1P48377 Snrpert-201ENSMUST00000121967 279 ntBASIC7.45□□□□□ -1.22
Rfx1P48377 Gm12045-201ENSMUST00000122122 573 ntBASIC7.45□□□□□ -1.22
Rfx1P48377 Gm14413-201ENSMUST00000122158 408 ntBASIC7.45□□□□□ -1.22
Rfx1P48377 Gm23212-201ENSMUST00000122718 60 ntBASIC7.45□□□□□ -1.22
Rfx1P48377 A430048G15Rik-201ENSMUST00000149965 627 ntTSL 1 (best) BASIC7.45□□□□□ -1.22
Rfx1P48377 Gm22390-201ENSMUST00000157588 325 ntBASIC7.45□□□□□ -1.22
Rfx1P48377 Gm22158-201ENSMUST00000158411 126 ntBASIC7.45□□□□□ -1.22
Rfx1P48377 Gm8374-201ENSMUST00000163826 672 ntAPPRIS P1 TSL 5 BASIC7.45□□□□□ -1.22
Rfx1P48377 Gm22990-201ENSMUST00000175427 89 ntBASIC7.45□□□□□ -1.22
Rfx1P48377 Trav12d-3-201ENSMUST00000177703 347 ntAPPRIS P1 BASIC7.45□□□□□ -1.22
Rfx1P48377 Gm26665-201ENSMUST00000181378 839 ntTSL 1 (best) BASIC7.45□□□□□ -1.22
Rfx1P48377 1700057G04Rik-206ENSMUST00000185580 842 ntTSL 1 (best) BASIC7.45□□□□□ -1.22
Rfx1P48377 Gm28560-201ENSMUST00000186091 315 ntBASIC7.45□□□□□ -1.22
Rfx1P48377 Gm28334-201ENSMUST00000186653 315 ntBASIC7.45□□□□□ -1.22
Rfx1P48377 Mrgprb13-201ENSMUST00000188191 985 ntBASIC7.45□□□□□ -1.22
Rfx1P48377 Gm8883-202ENSMUST00000188258 545 ntTSL 3 BASIC7.45□□□□□ -1.22
Rfx1P48377 Gm28495-201ENSMUST00000188452 315 ntBASIC7.45□□□□□ -1.22
Rfx1P48377 Gm28232-201ENSMUST00000188683 315 ntBASIC7.45□□□□□ -1.22
Rfx1P48377 Gm29600-201ENSMUST00000188687 377 ntBASIC7.45□□□□□ -1.22
Rfx1P48377 Gm28481-201ENSMUST00000189231 315 ntBASIC7.45□□□□□ -1.22
Rfx1P48377 Gm29059-201ENSMUST00000191534 315 ntBASIC7.45□□□□□ -1.22
Rfx1P48377 Gm37765-201ENSMUST00000192395 315 ntBASIC7.45□□□□□ -1.22
Rfx1P48377 Gm37237-201ENSMUST00000192893 315 ntBASIC7.45□□□□□ -1.22
Rfx1P48377 Gm37550-201ENSMUST00000193230 463 ntBASIC7.45□□□□□ -1.22
Rfx1P48377 2610012C04Rik-201ENSMUST00000193434 1023 ntBASIC7.45□□□□□ -1.22
Rfx1P48377 Gm36968-201ENSMUST00000193737 315 ntBASIC7.45□□□□□ -1.22
Rfx1P48377 Gm37477-201ENSMUST00000195215 884 ntBASIC7.45□□□□□ -1.22
Rfx1P48377 Gm38290-201ENSMUST00000195238 315 ntBASIC7.45□□□□□ -1.22
Rfx1P48377 Gm29950-201ENSMUST00000195273 237 ntBASIC7.45□□□□□ -1.22
Rfx1P48377 Gm42443-201ENSMUST00000198084 1155 ntBASIC7.45□□□□□ -1.22
Rfx1P48377 Gm43301-201ENSMUST00000198918 778 ntTSL 1 (best) BASIC7.45□□□□□ -1.22
Rfx1P48377 Gm44892-201ENSMUST00000208595 488 ntBASIC7.45□□□□□ -1.22
Rfx1P48377 Gm45507-201ENSMUST00000210611 519 ntTSL 5 BASIC7.45□□□□□ -1.22
Rfx1P48377 Gm19056-201ENSMUST00000218220 797 ntBASIC7.45□□□□□ -1.22
Rfx1P48377 Gm33312-201ENSMUST00000222443 332 ntBASIC7.45□□□□□ -1.22
Rfx1P48377 AC122858.1-201ENSMUST00000226212 433 ntBASIC7.45□□□□□ -1.22
Rfx1P48377 AC113269.1-201ENSMUST00000227185 674 ntBASIC7.45□□□□□ -1.22
Rfx1P48377 Magea4-201ENSMUST00000048675 948 ntAPPRIS P1 BASIC7.45□□□□□ -1.22
Rfx1P48377 Bglap3-201ENSMUST00000075523 717 ntAPPRIS P1 TSL 1 (best) BASIC7.45□□□□□ -1.22
Rfx1P48377 Gm10356-201ENSMUST00000097152 1258 ntBASIC7.45□□□□□ -1.22
Rfx1P48377 Zfp970-201ENSMUST00000099002 794 ntTSL 2 BASIC7.45□□□□□ -1.22
Rfx1P48377 Olfr90-205ENSMUST00000216488 3188 ntAPPRIS P1 TSL 5 BASIC7.45□□□□□ -1.22
Rfx1P48377 Gm3115-201ENSMUST00000166928 1797 ntAPPRIS P5 TSL 5 BASIC7.45□□□□□ -1.22
Rfx1P48377 Gm3182-201ENSMUST00000167902 1753 ntAPPRIS P5 TSL 5 BASIC7.45□□□□□ -1.22
Rfx1P48377 Gm2888-201ENSMUST00000170521 1758 ntAPPRIS P5 TSL 5 BASIC7.45□□□□□ -1.22
Rfx1P48377 Gm7876-202ENSMUST00000171305 1758 ntAPPRIS P5 TSL 5 BASIC7.45□□□□□ -1.22
Rfx1P48377 Gm3127-202ENSMUST00000171866 1758 ntAPPRIS P5 TSL 5 BASIC7.45□□□□□ -1.22
Rfx1P48377 AC134329.1-201ENSMUST00000217956 1770 ntTSL 5 BASIC7.45□□□□□ -1.22
Rfx1P48377 Gm42503-201ENSMUST00000199080 3706 ntBASIC7.45□□□□□ -1.22
Rfx1P48377 Smc5-201ENSMUST00000087556 5683 ntAPPRIS ALT2 TSL 1 (best) BASIC7.45□□□□□ -1.22
Rfx1P48377 Fam227b-204ENSMUST00000178118 1599 ntAPPRIS P2 TSL 5 BASIC7.45□□□□□ -1.22
Retrieved 100 of 76,532 protein–RNA pairs in 88.3 ms