Protein–RNA interactions for Protein: P20040

H-2 class II histocompatibility antigen, E-Q beta chain, mousemouse

Predictions only

Length 264 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P20040 Gm3173-201ENSMUST00000112776 519 ntAPPRIS P5 TSL 5 BASIC4.74□□□□□ -1.65
P20040 Gm7189-201ENSMUST00000119811 429 ntBASIC4.74□□□□□ -1.65
P20040 Gm12147-201ENSMUST00000144024 182 ntTSL 3 BASIC4.74□□□□□ -1.65
P20040 Gm26086-201ENSMUST00000157902 263 ntBASIC4.74□□□□□ -1.65
P20040 Gm3173-202ENSMUST00000164603 519 ntAPPRIS ALT2 TSL 1 (best) BASIC4.74□□□□□ -1.65
P20040 Gm3264-201ENSMUST00000166410 519 ntAPPRIS P2 TSL 1 (best) BASIC4.74□□□□□ -1.65
P20040 Gm8108-201ENSMUST00000167397 519 ntAPPRIS ALT2 TSL 5 BASIC4.74□□□□□ -1.65
P20040 Gm3005-201ENSMUST00000178060 444 ntTSL 1 (best) BASIC4.74□□□□□ -1.65
P20040 Gm3488-201ENSMUST00000178220 519 ntAPPRIS ALT2 TSL 1 (best) BASIC4.74□□□□□ -1.65
P20040 Trav12n-3-201ENSMUST00000179583 353 ntAPPRIS P1 BASIC4.74□□□□□ -1.65
P20040 Gm3317-201ENSMUST00000179659 519 ntAPPRIS P1 TSL 1 (best) BASIC4.74□□□□□ -1.65
P20040 Rps12-ps24-201ENSMUST00000182321 381 ntBASIC4.74□□□□□ -1.65
P20040 Gm27820-201ENSMUST00000183628 175 ntBASIC4.74□□□□□ -1.65
P20040 Mir7653-201ENSMUST00000184358 61 ntBASIC4.74□□□□□ -1.65
P20040 Gm28943-201ENSMUST00000186187 615 ntBASIC4.74□□□□□ -1.65
P20040 Gm28736-201ENSMUST00000186257 615 ntBASIC4.74□□□□□ -1.65
P20040 Gm29401-201ENSMUST00000186690 615 ntBASIC4.74□□□□□ -1.65
P20040 Gm29178-204ENSMUST00000186784 615 ntBASIC4.74□□□□□ -1.65
P20040 Gm28589-201ENSMUST00000186991 615 ntBASIC4.74□□□□□ -1.65
P20040 Gm28936-201ENSMUST00000187153 615 ntBASIC4.74□□□□□ -1.65
P20040 Gm29121-201ENSMUST00000187611 615 ntBASIC4.74□□□□□ -1.65
P20040 Gm28243-201ENSMUST00000187801 615 ntBASIC4.74□□□□□ -1.65
P20040 Gm28844-202ENSMUST00000187977 615 ntBASIC4.74□□□□□ -1.65
P20040 Gm29058-201ENSMUST00000189510 615 ntBASIC4.74□□□□□ -1.65
P20040 Gm28507-201ENSMUST00000189737 703 ntBASIC4.74□□□□□ -1.65
P20040 Gm29624-201ENSMUST00000190018 615 ntBASIC4.74□□□□□ -1.65
P20040 Gm28780-201ENSMUST00000190223 615 ntBASIC4.74□□□□□ -1.65
P20040 Gm29137-201ENSMUST00000190301 520 ntTSL 5 BASIC4.74□□□□□ -1.65
P20040 Gm28969-211ENSMUST00000190992 615 ntBASIC4.74□□□□□ -1.65
P20040 Gm28990-207ENSMUST00000191219 615 ntBASIC4.74□□□□□ -1.65
P20040 Gm36468-201ENSMUST00000192119 615 ntBASIC4.74□□□□□ -1.65
P20040 Gm31572-201ENSMUST00000193341 615 ntBASIC4.74□□□□□ -1.65
P20040 Gm30175-201ENSMUST00000194173 615 ntBASIC4.74□□□□□ -1.65
P20040 Gm30858-201ENSMUST00000195516 615 ntBASIC4.74□□□□□ -1.65
P20040 Gm42522-201ENSMUST00000196071 255 ntBASIC4.74□□□□□ -1.65
P20040 Olfr1315-ps1-201ENSMUST00000207542 1230 ntAPPRIS P5 TSL 5 BASIC4.74□□□□□ -1.65
P20040 Gm45185-201ENSMUST00000207556 404 ntBASIC4.74□□□□□ -1.65
P20040 Gm45820-201ENSMUST00000212068 362 ntTSL 3 BASIC4.74□□□□□ -1.65
P20040 Olfr878-202ENSMUST00000212878 1064 ntAPPRIS P1 BASIC4.74□□□□□ -1.65
P20040 AC108401.1-201ENSMUST00000219740 361 ntTSL 3 BASIC4.74□□□□□ -1.65
P20040 CT025611.1-201ENSMUST00000222537 906 ntTSL 5 BASIC4.74□□□□□ -1.65
P20040 AC192333.6-201ENSMUST00000224565 725 ntBASIC4.74□□□□□ -1.65
P20040 AC154634.3-201ENSMUST00000224589 736 ntBASIC4.74□□□□□ -1.65
P20040 Samt3-201ENSMUST00000047945 1048 ntAPPRIS P1 TSL 1 (best) BASIC4.74□□□□□ -1.65
P20040 Olfr799-201ENSMUST00000071126 936 ntAPPRIS P1 BASIC4.74□□□□□ -1.65
P20040 Gm20449-201ENSMUST00000094532 3847 ntAPPRIS P1 TSL 2 BASIC4.74□□□□□ -1.65
P20040 Olfr1107-201ENSMUST00000099865 1109 ntAPPRIS P1 BASIC4.74□□□□□ -1.65
P20040 Enpp2-203ENSMUST00000171545 2745 ntAPPRIS ALT1 TSL 1 (best) BASIC4.74□□□□□ -1.65
P20040 Vwa5a-201ENSMUST00000001544 4157 ntAPPRIS P1 TSL 1 (best) BASIC4.74□□□□□ -1.65
P20040 Olfr147-202ENSMUST00000214648 5356 ntAPPRIS ALT2 TSL 2 BASIC4.74□□□□□ -1.65
P20040 Gm42905-201ENSMUST00000196237 1611 ntBASIC4.74□□□□□ -1.65
P20040 Gm31258-201ENSMUST00000194532 3297 ntBASIC4.74□□□□□ -1.65
P20040 Btbd35f14-201ENSMUST00000105117 1701 ntAPPRIS P1 BASIC4.74□□□□□ -1.65
P20040 Rbm46-202ENSMUST00000182637 2058 ntTSL 5 BASIC4.74□□□□□ -1.65
P20040 Gm37779-201ENSMUST00000194221 3380 ntBASIC4.74□□□□□ -1.65
P20040 Gm38189-201ENSMUST00000194495 1457 ntBASIC4.74□□□□□ -1.65
P20040 Il1rapl1-203ENSMUST00000113966 9133 ntAPPRIS P1 TSL 5 BASIC4.74□□□□□ -1.65
P20040 Vmn2r95-201ENSMUST00000166327 2538 ntAPPRIS P1 TSL 5 BASIC4.74□□□□□ -1.65
P20040 Rnf213-201ENSMUST00000093902 16716 ntAPPRIS ALT2 TSL 5 BASIC4.74□□□□□ -1.65
P20040 3110043O21Rik-202ENSMUST00000108126 2644 ntTSL 1 (best) BASIC4.74□□□□□ -1.65
P20040 Btbd35f24-201ENSMUST00000178080 1941 ntAPPRIS P1 BASIC4.74□□□□□ -1.65
P20040 Muc15-203ENSMUST00000111017 3095 ntTSL 1 (best) BASIC4.74□□□□□ -1.65
P20040 Nxf2-201ENSMUST00000010085 2393 ntAPPRIS ALT2 TSL 1 (best) BASIC4.73□□□□□ -1.65
P20040 Gm17021-202ENSMUST00000214413 2371 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
P20040 Gm16794-201ENSMUST00000180727 2100 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
P20040 CT573016.1-201ENSMUST00000224814 2103 ntAPPRIS P5 BASIC4.73□□□□□ -1.65
P20040 Gm43162-201ENSMUST00000198292 1770 ntBASIC4.73□□□□□ -1.65
P20040 Vmn1r235-201ENSMUST00000060603 1781 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.65
P20040 4930539J05Rik-201ENSMUST00000181619 1406 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
P20040 Olfr303-205ENSMUST00000216409 4106 ntAPPRIS P1 TSL 5 BASIC4.73□□□□□ -1.65
P20040 Ube2u-202ENSMUST00000133493 1537 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.65
P20040 Ssxb10-201ENSMUST00000103003 879 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.65
P20040 Ppih-202ENSMUST00000106317 613 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
P20040 Gp6-201ENSMUST00000108590 965 ntAPPRIS ALT2 TSL 1 (best) BASIC4.73□□□□□ -1.65
P20040 Gm14985-201ENSMUST00000118693 786 ntBASIC4.73□□□□□ -1.65
P20040 Gm7079-201ENSMUST00000119726 171 ntBASIC4.73□□□□□ -1.65
P20040 C030037D09Rik-201ENSMUST00000125967 367 ntTSL 5 BASIC4.73□□□□□ -1.65
P20040 Gm13028-201ENSMUST00000128563 277 ntTSL 3 BASIC4.73□□□□□ -1.65
P20040 Gm15848-203ENSMUST00000136015 482 ntTSL 5 BASIC4.73□□□□□ -1.65
P20040 Gm13189-201ENSMUST00000138462 252 ntTSL 3 BASIC4.73□□□□□ -1.65
P20040 Crem-236ENSMUST00000154715 1167 ntTSL 5 BASIC4.73□□□□□ -1.65
P20040 Gm15775-201ENSMUST00000159796 538 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
P20040 Vmn1r-ps79-201ENSMUST00000173508 963 ntBASIC4.73□□□□□ -1.65
P20040 Vmn1r-ps70-201ENSMUST00000173675 963 ntBASIC4.73□□□□□ -1.65
P20040 Vmn1r-ps64-201ENSMUST00000173746 655 ntBASIC4.73□□□□□ -1.65
P20040 Gm28075-201ENSMUST00000189179 354 ntTSL 3 BASIC4.73□□□□□ -1.65
P20040 Gm37932-201ENSMUST00000192258 1167 ntBASIC4.73□□□□□ -1.65
P20040 Rrh-208ENSMUST00000200079 1106 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
P20040 8030487O14Rik-201ENSMUST00000200244 903 ntBASIC4.73□□□□□ -1.65
P20040 Gm43629-201ENSMUST00000201782 704 ntBASIC4.73□□□□□ -1.65
P20040 Gm35648-201ENSMUST00000202304 475 ntBASIC4.73□□□□□ -1.65
P20040 Epgn-202ENSMUST00000202724 805 ntAPPRIS ALT2 TSL 1 (best) BASIC4.73□□□□□ -1.65
P20040 Gm43945-201ENSMUST00000203595 754 ntBASIC4.73□□□□□ -1.65
P20040 Gm44214-201ENSMUST00000204153 606 ntBASIC4.73□□□□□ -1.65
P20040 Gm43974-201ENSMUST00000205080 684 ntBASIC4.73□□□□□ -1.65
P20040 Gm36864-201ENSMUST00000205530 684 ntAPPRIS ALT2 TSL 3 BASIC4.73□□□□□ -1.65
P20040 Gm44559-201ENSMUST00000207177 1012 ntBASIC4.73□□□□□ -1.65
P20040 Gm45075-201ENSMUST00000208426 649 ntTSL 3 BASIC4.73□□□□□ -1.65
P20040 Gm18705-201ENSMUST00000215985 913 ntBASIC4.73□□□□□ -1.65
P20040 Gm19174-201ENSMUST00000216944 956 ntBASIC4.73□□□□□ -1.65
Retrieved 100 of 76,532 protein–RNA pairs in 94.1 ms