Protein–RNA interactions for Protein: P0C0A3

Chmp6, Charged multivesicular body protein 6, mousemouse

Predictions only

Length 200 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp6P0C0A3 Gm29656-201ENSMUST00000187236 174 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
Chmp6P0C0A3 Gm21821-202ENSMUST00000187288 175 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
Chmp6P0C0A3 Gm28886-201ENSMUST00000187350 174 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
Chmp6P0C0A3 Gm21599-202ENSMUST00000187381 174 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
Chmp6P0C0A3 Gm28128-201ENSMUST00000187403 174 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
Chmp6P0C0A3 Gm21450-201ENSMUST00000187408 174 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
Chmp6P0C0A3 Gm28194-201ENSMUST00000187412 484 ntBASIC5.76□□□□□ -1.49
Chmp6P0C0A3 Gm28689-201ENSMUST00000187441 174 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
Chmp6P0C0A3 Gm28851-201ENSMUST00000187800 174 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
Chmp6P0C0A3 Gm28886-202ENSMUST00000187889 484 ntBASIC5.76□□□□□ -1.49
Chmp6P0C0A3 Gm28554-201ENSMUST00000187964 174 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
Chmp6P0C0A3 Gm28984-201ENSMUST00000188202 174 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
Chmp6P0C0A3 Gm21529-202ENSMUST00000188473 174 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
Chmp6P0C0A3 Gm28604-202ENSMUST00000188638 174 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
Chmp6P0C0A3 Gm21588-202ENSMUST00000188721 174 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
Chmp6P0C0A3 Gm21539-202ENSMUST00000188764 174 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
Chmp6P0C0A3 Gm28216-201ENSMUST00000188785 174 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
Chmp6P0C0A3 Gm29645-201ENSMUST00000189117 174 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
Chmp6P0C0A3 Gm28554-202ENSMUST00000189175 484 ntBASIC5.76□□□□□ -1.49
Chmp6P0C0A3 Gm21413-201ENSMUST00000189224 174 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
Chmp6P0C0A3 Gm21723-202ENSMUST00000189444 174 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
Chmp6P0C0A3 Gm36782-201ENSMUST00000189459 174 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
Chmp6P0C0A3 Gm21419-201ENSMUST00000189495 173 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
Chmp6P0C0A3 Gm28566-202ENSMUST00000189532 174 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
Chmp6P0C0A3 Gm29213-202ENSMUST00000189703 484 ntBASIC5.76□□□□□ -1.49
Chmp6P0C0A3 Gm21626-202ENSMUST00000189751 174 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
Chmp6P0C0A3 Gm28851-202ENSMUST00000189757 484 ntBASIC5.76□□□□□ -1.49
Chmp6P0C0A3 Gm28656-201ENSMUST00000190017 174 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
Chmp6P0C0A3 Gm28461-201ENSMUST00000190023 484 ntBASIC5.76□□□□□ -1.49
Chmp6P0C0A3 Gm21562-202ENSMUST00000190314 174 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
Chmp6P0C0A3 Gm28517-201ENSMUST00000190343 174 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
Chmp6P0C0A3 Gm29531-201ENSMUST00000190569 174 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
Chmp6P0C0A3 Gm21914-202ENSMUST00000190577 174 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
Chmp6P0C0A3 Gm20978-201ENSMUST00000190688 174 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
Chmp6P0C0A3 Gm20963-201ENSMUST00000190880 174 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
Chmp6P0C0A3 Gm29316-201ENSMUST00000190953 174 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
Chmp6P0C0A3 Gm29351-201ENSMUST00000191052 174 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
Chmp6P0C0A3 Gm29466-201ENSMUST00000191077 174 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
Chmp6P0C0A3 Gm20987-201ENSMUST00000191165 174 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
Chmp6P0C0A3 Gm28194-202ENSMUST00000191217 174 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
Chmp6P0C0A3 Gm28461-202ENSMUST00000191406 174 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
Chmp6P0C0A3 Gm37927-201ENSMUST00000192238 174 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
Chmp6P0C0A3 Gm37544-201ENSMUST00000192803 174 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
Chmp6P0C0A3 Gm37635-201ENSMUST00000193129 174 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
Chmp6P0C0A3 Gm21809-202ENSMUST00000194072 174 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
Chmp6P0C0A3 Gm37386-201ENSMUST00000194755 72 ntTSL 5 BASIC5.76□□□□□ -1.49
Chmp6P0C0A3 Nts-201ENSMUST00000020040 1248 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
Chmp6P0C0A3 Gm44214-201ENSMUST00000204153 606 ntBASIC5.76□□□□□ -1.49
Chmp6P0C0A3 Gm44074-201ENSMUST00000204562 337 ntBASIC5.76□□□□□ -1.49
Chmp6P0C0A3 Gm45845-201ENSMUST00000207326 582 ntBASIC5.76□□□□□ -1.49
Chmp6P0C0A3 Gm36543-201ENSMUST00000217933 542 ntTSL 5 BASIC5.76□□□□□ -1.49
Chmp6P0C0A3 AC238676.3-201ENSMUST00000223042 154 ntBASIC5.76□□□□□ -1.49
Chmp6P0C0A3 AC161609.1-201ENSMUST00000225878 474 ntBASIC5.76□□□□□ -1.49
Chmp6P0C0A3 AC154323.1-201ENSMUST00000228329 1231 ntBASIC5.76□□□□□ -1.49
Chmp6P0C0A3 Olfr447-201ENSMUST00000055763 933 ntAPPRIS P1 BASIC5.76□□□□□ -1.49
Chmp6P0C0A3 Mir449a-201ENSMUST00000083641 91 ntBASIC5.76□□□□□ -1.49
Chmp6P0C0A3 Gm6645-201ENSMUST00000118505 2726 ntBASIC5.76□□□□□ -1.49
Chmp6P0C0A3 Taok1-201ENSMUST00000017435 11813 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
Chmp6P0C0A3 Gm14139-202ENSMUST00000109929 1485 ntTSL 5 BASIC5.76□□□□□ -1.49
Chmp6P0C0A3 Gm38351-201ENSMUST00000195466 2518 ntBASIC5.76□□□□□ -1.49
Chmp6P0C0A3 Sri-202ENSMUST00000088786 2504 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
Chmp6P0C0A3 Ctsm-202ENSMUST00000223778 1905 ntAPPRIS P1 BASIC5.76□□□□□ -1.49
Chmp6P0C0A3 Gm19552-201ENSMUST00000194744 2833 ntBASIC5.75□□□□□ -1.49
Chmp6P0C0A3 Impg1-201ENSMUST00000085289 3356 ntAPPRIS ALT2 TSL 5 BASIC5.75□□□□□ -1.49
Chmp6P0C0A3 1700019J19Rik-202ENSMUST00000213583 1856 ntTSL 5 BASIC5.75□□□□□ -1.49
Chmp6P0C0A3 Olfr341-202ENSMUST00000213300 6634 ntAPPRIS P1 TSL 5 BASIC5.75□□□□□ -1.49
Chmp6P0C0A3 4933403O08Rik-202ENSMUST00000152343 1520 ntAPPRIS P2 TSL 1 (best) BASIC5.75□□□□□ -1.49
Chmp6P0C0A3 Vmn1r175-202ENSMUST00000228383 2878 ntAPPRIS P1 BASIC5.75□□□□□ -1.49
Chmp6P0C0A3 4930431P03Rik-202ENSMUST00000166127 4237 ntTSL 2 BASIC5.75□□□□□ -1.49
Chmp6P0C0A3 Fbxl13-201ENSMUST00000051358 2531 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
Chmp6P0C0A3 Vmn1r43-204ENSMUST00000226983 12805 ntAPPRIS P1 BASIC5.75□□□□□ -1.49
Chmp6P0C0A3 Pold3-209ENSMUST00000208670 1716 ntTSL 5 BASIC5.75□□□□□ -1.49
Chmp6P0C0A3 Ssxb2-202ENSMUST00000103000 750 ntAPPRIS ALT2 TSL 1 (best) BASIC5.75□□□□□ -1.49
Chmp6P0C0A3 Mir292-201ENSMUST00000104847 82 ntBASIC5.75□□□□□ -1.49
Chmp6P0C0A3 Cd59b-202ENSMUST00000111130 706 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
Chmp6P0C0A3 Spin2d-201ENSMUST00000114517 1015 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
Chmp6P0C0A3 Gm13537-201ENSMUST00000120467 267 ntBASIC5.75□□□□□ -1.49
Chmp6P0C0A3 Gm11278-201ENSMUST00000121002 997 ntBASIC5.75□□□□□ -1.49
Chmp6P0C0A3 Eif1-ps3-201ENSMUST00000121450 342 ntBASIC5.75□□□□□ -1.49
Chmp6P0C0A3 Gm15290-201ENSMUST00000132880 577 ntTSL 3 BASIC5.75□□□□□ -1.49
Chmp6P0C0A3 Gm12472-201ENSMUST00000153232 1140 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
Chmp6P0C0A3 Crem-235ENSMUST00000154705 529 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
Chmp6P0C0A3 Gm2959-201ENSMUST00000169844 621 ntBASIC5.75□□□□□ -1.49
Chmp6P0C0A3 Gm17223-201ENSMUST00000171413 481 ntBASIC5.75□□□□□ -1.49
Chmp6P0C0A3 1700047L14Rik-201ENSMUST00000189659 511 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
Chmp6P0C0A3 Gm5886-201ENSMUST00000203420 641 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
Chmp6P0C0A3 Gm36864-201ENSMUST00000205530 684 ntAPPRIS ALT2 TSL 3 BASIC5.75□□□□□ -1.49
Chmp6P0C0A3 Gm18599-201ENSMUST00000206729 1125 ntBASIC5.75□□□□□ -1.49
Chmp6P0C0A3 AC158633.1-201ENSMUST00000219892 649 ntBASIC5.75□□□□□ -1.49
Chmp6P0C0A3 AC154583.1-201ENSMUST00000224788 655 ntBASIC5.75□□□□□ -1.49
Chmp6P0C0A3 Glod5-201ENSMUST00000033503 673 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
Chmp6P0C0A3 Anxa10-202ENSMUST00000034054 1222 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
Chmp6P0C0A3 Ssxb1-201ENSMUST00000037297 875 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
Chmp6P0C0A3 Olfr738-201ENSMUST00000058972 936 ntAPPRIS P1 BASIC5.75□□□□□ -1.49
Chmp6P0C0A3 Olfr871-201ENSMUST00000073122 1147 ntAPPRIS P1 BASIC5.75□□□□□ -1.49
Chmp6P0C0A3 Olfr1261-201ENSMUST00000077785 921 ntAPPRIS P1 BASIC5.75□□□□□ -1.49
Chmp6P0C0A3 Olfr586-201ENSMUST00000084811 954 ntAPPRIS P2 BASIC5.75□□□□□ -1.49
Chmp6P0C0A3 Zfp182-201ENSMUST00000040628 2487 ntAPPRIS P2 TSL 1 (best) BASIC5.75□□□□□ -1.49
Chmp6P0C0A3 Gm34639-201ENSMUST00000222648 2241 ntTSL 5 BASIC5.75□□□□□ -1.49
Chmp6P0C0A3 Vmn1r171-209ENSMUST00000228228 2863 ntAPPRIS ALT2 BASIC5.75□□□□□ -1.49
Retrieved 100 of 76,532 protein–RNA pairs in 125.3 ms