Protein–RNA interactions for Protein: P09027

Hoxd3, Homeobox protein Hox-D3, mousemouse

Predictions only

Length 433 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxd3P09027 Gm11895-201ENSMUST00000122165 467 ntBASIC5.73□□□□□ -1.49
Hoxd3P09027 Gm15788-201ENSMUST00000130123 613 ntTSL 3 BASIC5.73□□□□□ -1.49
Hoxd3P09027 Gm12519-201ENSMUST00000134099 693 ntTSL 5 BASIC5.73□□□□□ -1.49
Hoxd3P09027 Gm3362-201ENSMUST00000148102 466 ntBASIC5.73□□□□□ -1.49
Hoxd3P09027 Gm11636-201ENSMUST00000152172 774 ntTSL 2 BASIC5.73□□□□□ -1.49
Hoxd3P09027 4430402I18Rik-203ENSMUST00000160542 1057 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
Hoxd3P09027 Gm3470-201ENSMUST00000160819 420 ntBASIC5.73□□□□□ -1.49
Hoxd3P09027 Gm6428-201ENSMUST00000161062 345 ntBASIC5.73□□□□□ -1.49
Hoxd3P09027 Gm10552-202ENSMUST00000161763 717 ntTSL 5 BASIC5.73□□□□□ -1.49
Hoxd3P09027 Ear10-202ENSMUST00000163652 471 ntAPPRIS P1 BASIC5.73□□□□□ -1.49
Hoxd3P09027 Snrpe-203ENSMUST00000166291 360 ntTSL 3 BASIC5.73□□□□□ -1.49
Hoxd3P09027 Gm8207-201ENSMUST00000171204 502 ntBASIC5.73□□□□□ -1.49
Hoxd3P09027 Gm7651-201ENSMUST00000173398 901 ntBASIC5.73□□□□□ -1.49
Hoxd3P09027 Gm4258-201ENSMUST00000182127 506 ntTSL 2 BASIC5.73□□□□□ -1.49
Hoxd3P09027 1700054A03Rik-201ENSMUST00000187368 780 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
Hoxd3P09027 2010103J01Rik-201ENSMUST00000192375 388 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
Hoxd3P09027 1700113A16Rik-202ENSMUST00000197172 776 ntTSL 2 BASIC5.73□□□□□ -1.49
Hoxd3P09027 Gm42804-201ENSMUST00000199701 178 ntBASIC5.73□□□□□ -1.49
Hoxd3P09027 Gm43700-201ENSMUST00000200967 316 ntTSL 5 BASIC5.73□□□□□ -1.49
Hoxd3P09027 Gm35876-201ENSMUST00000205044 459 ntBASIC5.73□□□□□ -1.49
Hoxd3P09027 Gm45004-201ENSMUST00000205302 465 ntTSL 2 BASIC5.73□□□□□ -1.49
Hoxd3P09027 4933430N04Rik-202ENSMUST00000208031 1146 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
Hoxd3P09027 Gm45485-201ENSMUST00000211229 357 ntBASIC5.73□□□□□ -1.49
Hoxd3P09027 Gm36445-205ENSMUST00000211729 1100 ntTSL 5 BASIC5.73□□□□□ -1.49
Hoxd3P09027 Gm7413-201ENSMUST00000219498 462 ntBASIC5.73□□□□□ -1.49
Hoxd3P09027 Gm31849-201ENSMUST00000220306 375 ntBASIC5.73□□□□□ -1.49
Hoxd3P09027 AC134420.1-201ENSMUST00000227027 289 ntBASIC5.73□□□□□ -1.49
Hoxd3P09027 Fxyd4-201ENSMUST00000005114 1199 ntAPPRIS P1 TSL 5 BASIC5.73□□□□□ -1.49
Hoxd3P09027 Cd200r3-202ENSMUST00000077178 767 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
Hoxd3P09027 Olfr944-201ENSMUST00000079650 936 ntAPPRIS P1 BASIC5.73□□□□□ -1.49
Hoxd3P09027 Olfr586-201ENSMUST00000084811 954 ntAPPRIS P2 BASIC5.73□□□□□ -1.49
Hoxd3P09027 Olfr859-201ENSMUST00000086480 930 ntAPPRIS P1 BASIC5.73□□□□□ -1.49
Hoxd3P09027 Sp1-201ENSMUST00000001326 7754 ntAPPRIS P2 TSL 1 (best) BASIC5.73□□□□□ -1.49
Hoxd3P09027 4933424H11Rik-201ENSMUST00000200511 2018 ntBASIC5.73□□□□□ -1.49
Hoxd3P09027 Gm3892-202ENSMUST00000178043 3539 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
Hoxd3P09027 Gm10593-201ENSMUST00000178906 3539 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
Hoxd3P09027 Zzz3-204ENSMUST00000106103 2674 ntAPPRIS ALT2 TSL 1 (best) BASIC5.73□□□□□ -1.49
Hoxd3P09027 9530086O07Rik-201ENSMUST00000203503 2685 ntBASIC5.73□□□□□ -1.49
Hoxd3P09027 Mpzl3-203ENSMUST00000114664 3424 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
Hoxd3P09027 Asap1-215ENSMUST00000177035 3228 ntAPPRIS ALT2 TSL 5 BASIC5.73□□□□□ -1.49
Hoxd3P09027 Gm44194-201ENSMUST00000204222 3229 ntBASIC5.73□□□□□ -1.49
Hoxd3P09027 Ttll4-202ENSMUST00000113678 3762 ntTSL 5 BASIC5.73□□□□□ -1.49
Hoxd3P09027 Serpinb8-201ENSMUST00000000514 3001 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
Hoxd3P09027 Idh1-203ENSMUST00000169032 2283 ntAPPRIS P1 TSL 5 BASIC5.73□□□□□ -1.49
Hoxd3P09027 AC154141.1-201ENSMUST00000208403 4136 ntBASIC5.73□□□□□ -1.49
Hoxd3P09027 Gm37685-201ENSMUST00000193507 2177 ntBASIC5.73□□□□□ -1.49
Hoxd3P09027 Dbhos-201ENSMUST00000150024 4020 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
Hoxd3P09027 Kcnj15-207ENSMUST00000113861 3385 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
Hoxd3P09027 Abi1-212ENSMUST00000153931 2729 ntAPPRIS ALT1 TSL 5 BASIC5.73□□□□□ -1.49
Hoxd3P09027 Sla-201ENSMUST00000100572 2626 ntAPPRIS P3 TSL 1 (best) BASIC5.73□□□□□ -1.49
Hoxd3P09027 Stat4-201ENSMUST00000027277 2982 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
Hoxd3P09027 Zfp873-201ENSMUST00000105313 1893 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
Hoxd3P09027 Tmem173-201ENSMUST00000115728 2302 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
Hoxd3P09027 B3gnt5-207ENSMUST00000164397 4872 ntAPPRIS P1 TSL 5 BASIC5.73□□□□□ -1.49
Hoxd3P09027 Spta1-201ENSMUST00000027817 8406 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
Hoxd3P09027 Tmc2-201ENSMUST00000077988 3216 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
Hoxd3P09027 Rdx-203ENSMUST00000163153 4131 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
Hoxd3P09027 Gm35835-201ENSMUST00000214447 4589 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
Hoxd3P09027 Ctnna2-202ENSMUST00000159626 3908 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
Hoxd3P09027 2310002F09Rik-202ENSMUST00000181551 2468 ntTSL 5 BASIC5.72□□□□□ -1.49
Hoxd3P09027 Gm18726-201ENSMUST00000218175 2010 ntBASIC5.72□□□□□ -1.49
Hoxd3P09027 Trpm8-204ENSMUST00000171176 3723 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
Hoxd3P09027 Rassf6-206ENSMUST00000202784 1919 ntAPPRIS ALT2 TSL 1 (best) BASIC5.72□□□□□ -1.49
Hoxd3P09027 Olfr1348-209ENSMUST00000213549 2714 ntAPPRIS P1 TSL 5 BASIC5.72□□□□□ -1.49
Hoxd3P09027 Oas2-201ENSMUST00000053909 3869 ntAPPRIS P3 TSL 1 (best) BASIC5.72□□□□□ -1.49
Hoxd3P09027 Gm18957-201ENSMUST00000197623 1813 ntBASIC5.72□□□□□ -1.49
Hoxd3P09027 Gm8844-201ENSMUST00000119460 2614 ntBASIC5.72□□□□□ -1.49
Hoxd3P09027 Gm29379-201ENSMUST00000186305 2166 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
Hoxd3P09027 Gm28276-201ENSMUST00000188508 2166 ntTSL 5 BASIC5.72□□□□□ -1.49
Hoxd3P09027 AC159308.1-201ENSMUST00000216615 1351 ntBASIC5.72□□□□□ -1.49
Hoxd3P09027 Atp8b5-204ENSMUST00000107942 4463 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
Hoxd3P09027 Slc4a4-201ENSMUST00000113216 2518 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
Hoxd3P09027 Cdk5rap2-206ENSMUST00000144099 11847 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
Hoxd3P09027 Adarb2-202ENSMUST00000123187 4002 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
Hoxd3P09027 Mmp10-201ENSMUST00000034488 1722 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
Hoxd3P09027 Cytip-201ENSMUST00000028175 6110 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
Hoxd3P09027 Kcnj15-205ENSMUST00000113858 5309 ntTSL 5 BASIC5.72□□□□□ -1.49
Hoxd3P09027 Ighv3-1-201ENSMUST00000103478 350 ntAPPRIS P1 BASIC5.72□□□□□ -1.49
Hoxd3P09027 Rpl35a-203ENSMUST00000115076 519 ntAPPRIS P1 TSL 2 BASIC5.72□□□□□ -1.49
Hoxd3P09027 Gm12235-201ENSMUST00000118596 170 ntBASIC5.72□□□□□ -1.49
Hoxd3P09027 Gm12844-201ENSMUST00000119463 582 ntBASIC5.72□□□□□ -1.49
Hoxd3P09027 Gm15106-201ENSMUST00000119691 821 ntBASIC5.72□□□□□ -1.49
Hoxd3P09027 Gm11371-201ENSMUST00000120294 385 ntBASIC5.72□□□□□ -1.49
Hoxd3P09027 Fam229b-202ENSMUST00000124941 721 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
Hoxd3P09027 Gm16330-201ENSMUST00000128324 297 ntBASIC5.72□□□□□ -1.49
Hoxd3P09027 Gm13421-202ENSMUST00000142511 803 ntTSL 3 BASIC5.72□□□□□ -1.49
Hoxd3P09027 Gm13840-201ENSMUST00000149608 256 ntTSL 2 BASIC5.72□□□□□ -1.49
Hoxd3P09027 Gm13173-201ENSMUST00000151703 441 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
Hoxd3P09027 Gm25180-201ENSMUST00000157746 115 ntBASIC5.72□□□□□ -1.49
Hoxd3P09027 Gm22085-201ENSMUST00000158344 110 ntBASIC5.72□□□□□ -1.49
Hoxd3P09027 Gm3159-201ENSMUST00000164038 997 ntAPPRIS ALT2 TSL 5 BASIC5.72□□□□□ -1.49
Hoxd3P09027 Gm26179-201ENSMUST00000177723 132 ntBASIC5.72□□□□□ -1.49
Hoxd3P09027 Gm25671-201ENSMUST00000178612 105 ntBASIC5.72□□□□□ -1.49
Hoxd3P09027 Gm8247-202ENSMUST00000178759 375 ntAPPRIS ALT2 TSL 5 BASIC5.72□□□□□ -1.49
Hoxd3P09027 Gm23307-201ENSMUST00000179167 105 ntBASIC5.72□□□□□ -1.49
Hoxd3P09027 9430069I07Rik-201ENSMUST00000179647 336 ntAPPRIS P1 TSL 5 BASIC5.72□□□□□ -1.49
Hoxd3P09027 Gm25286-201ENSMUST00000179790 105 ntBASIC5.72□□□□□ -1.49
Hoxd3P09027 Gm9457-201ENSMUST00000180176 372 ntBASIC5.72□□□□□ -1.49
Hoxd3P09027 Gm9381-201ENSMUST00000182285 1012 ntBASIC5.72□□□□□ -1.49
Hoxd3P09027 Gm27385-201ENSMUST00000184747 104 ntBASIC5.72□□□□□ -1.49
Retrieved 100 of 76,532 protein–RNA pairs in 86.3 ms