Protein–RNA interactions for Protein: J3QNE4

Ccdc180, Coiled-coil domain-containing 180, mousemouse

Predictions only

Length 1,664 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc180J3QNE4 Abi1-205ENSMUST00000123948 3067 ntAPPRIS P4 TSL 1 (best) BASIC9.65□□□□□ -0.86
Ccdc180J3QNE4 Xkrx-201ENSMUST00000033611 2876 ntAPPRIS P1 TSL 1 (best) BASIC9.65□□□□□ -0.86
Ccdc180J3QNE4 Noct-202ENSMUST00000144826 9797 ntAPPRIS ALT2 TSL 1 (best) BASIC9.65□□□□□ -0.87
Ccdc180J3QNE4 Cfap57-202ENSMUST00000081921 3750 ntAPPRIS P1 TSL 5 BASIC9.65□□□□□ -0.87
Ccdc180J3QNE4 Nol8-201ENSMUST00000021824 4242 ntAPPRIS P2 TSL 5 BASIC9.65□□□□□ -0.87
Ccdc180J3QNE4 Gm15892-203ENSMUST00000156149 1001 ntTSL 1 (best) BASIC9.64□□□□□ -0.87
Ccdc180J3QNE4 Gm27016-201ENSMUST00000183294 715 ntTSL 5 BASIC9.64□□□□□ -0.87
Ccdc180J3QNE4 Gm27781-201ENSMUST00000185185 92 ntBASIC9.64□□□□□ -0.87
Ccdc180J3QNE4 Gm2497-201ENSMUST00000189539 601 ntBASIC9.64□□□□□ -0.87
Ccdc180J3QNE4 Gm40598-201ENSMUST00000222953 547 ntBASIC9.64□□□□□ -0.87
Ccdc180J3QNE4 AC154239.1-201ENSMUST00000228565 406 ntBASIC9.64□□□□□ -0.87
Ccdc180J3QNE4 Glipr1l1-201ENSMUST00000073617 896 ntAPPRIS P1 TSL 1 (best) BASIC9.64□□□□□ -0.87
Ccdc180J3QNE4 Ostn-201ENSMUST00000066852 1423 ntAPPRIS P1 TSL 1 (best) BASIC9.64□□□□□ -0.87
Ccdc180J3QNE4 A830008E24Rik-202ENSMUST00000190485 5226 ntTSL 1 (best) BASIC9.64□□□□□ -0.87
Ccdc180J3QNE4 Gm44248-201ENSMUST00000203079 1549 ntBASIC9.64□□□□□ -0.87
Ccdc180J3QNE4 Enox2-201ENSMUST00000033437 3170 ntTSL 1 (best) BASIC9.64□□□□□ -0.87
Ccdc180J3QNE4 Gm5444-201ENSMUST00000065956 2468 ntTSL 1 (best) BASIC9.64□□□□□ -0.87
Ccdc180J3QNE4 Gm5383-201ENSMUST00000121177 617 ntBASIC9.64□□□□□ -0.87
Ccdc180J3QNE4 Gm12413-201ENSMUST00000121508 312 ntBASIC9.64□□□□□ -0.87
Ccdc180J3QNE4 Gm11844-201ENSMUST00000129207 459 ntTSL 1 (best) BASIC9.64□□□□□ -0.87
Ccdc180J3QNE4 Gm13838-201ENSMUST00000132130 531 ntTSL 5 BASIC9.64□□□□□ -0.87
Ccdc180J3QNE4 Gm14505-201ENSMUST00000145383 831 ntTSL 3 BASIC9.64□□□□□ -0.87
Ccdc180J3QNE4 4930519D14Rik-201ENSMUST00000151471 1137 ntTSL 1 (best) BASIC9.64□□□□□ -0.87
Ccdc180J3QNE4 Gm8941-201ENSMUST00000181451 899 ntBASIC9.64□□□□□ -0.87
Ccdc180J3QNE4 Olfr1075-ps1-201ENSMUST00000214201 470 ntBASIC9.64□□□□□ -0.87
Ccdc180J3QNE4 Selenok-ps6-201ENSMUST00000221812 283 ntBASIC9.64□□□□□ -0.87
Ccdc180J3QNE4 Icos-201ENSMUST00000027162 810 ntAPPRIS ALT2 TSL 1 (best) BASIC9.64□□□□□ -0.87
Ccdc180J3QNE4 Olfr1020-201ENSMUST00000055840 1079 ntAPPRIS P1 BASIC9.64□□□□□ -0.87
Ccdc180J3QNE4 Olfr68-201ENSMUST00000072513 948 ntAPPRIS P1 BASIC9.64□□□□□ -0.87
Ccdc180J3QNE4 Cntnap5b-201ENSMUST00000086738 4027 ntAPPRIS P1 TSL 2 BASIC9.64□□□□□ -0.87
Ccdc180J3QNE4 Gm45762-201ENSMUST00000212863 2619 ntBASIC9.63□□□□□ -0.87
Ccdc180J3QNE4 Vmn2r24-201ENSMUST00000075095 2565 ntAPPRIS P1 TSL 5 BASIC9.63□□□□□ -0.87
Ccdc180J3QNE4 Kat6b-ps2-201ENSMUST00000188339 1600 ntBASIC9.63□□□□□ -0.87
Ccdc180J3QNE4 Gm18163-201ENSMUST00000197877 1643 ntBASIC9.63□□□□□ -0.87
Ccdc180J3QNE4 Trip12-201ENSMUST00000027421 9632 ntAPPRIS P2 TSL 5 BASIC9.63□□□□□ -0.87
Ccdc180J3QNE4 E430024I08Rik-208ENSMUST00000223312 1573 ntTSL 5 BASIC9.63□□□□□ -0.87
Ccdc180J3QNE4 Gm43359-201ENSMUST00000197944 2200 ntBASIC9.63□□□□□ -0.87
Ccdc180J3QNE4 A630009H07Rik-201ENSMUST00000208485 2159 ntTSL 1 (best) BASIC9.63□□□□□ -0.87
Ccdc180J3QNE4 Gm11699-201ENSMUST00000119016 401 ntBASIC9.63□□□□□ -0.87
Ccdc180J3QNE4 Gm16019-201ENSMUST00000149538 261 ntTSL 5 BASIC9.63□□□□□ -0.87
Ccdc180J3QNE4 Smdt1-202ENSMUST00000159054 294 ntTSL 5 BASIC9.63□□□□□ -0.87
Ccdc180J3QNE4 Gm21850-201ENSMUST00000179792 359 ntBASIC9.63□□□□□ -0.87
Ccdc180J3QNE4 Gm28468-201ENSMUST00000188536 615 ntBASIC9.63□□□□□ -0.87
Ccdc180J3QNE4 Gm14393-201ENSMUST00000072895 625 ntAPPRIS P1 TSL 2 BASIC9.63□□□□□ -0.87
Ccdc180J3QNE4 Hdac9-201ENSMUST00000110819 4413 ntTSL 1 (best) BASIC9.63□□□□□ -0.87
Ccdc180J3QNE4 Gbp9-201ENSMUST00000031238 4381 ntAPPRIS P1 TSL 1 (best) BASIC9.63□□□□□ -0.87
Ccdc180J3QNE4 Gm12633-201ENSMUST00000117742 1705 ntBASIC9.63□□□□□ -0.87
Ccdc180J3QNE4 Anapc10-201ENSMUST00000048147 2801 ntAPPRIS P1 TSL 1 (best) BASIC9.63□□□□□ -0.87
Ccdc180J3QNE4 Adgrl3-203ENSMUST00000117253 4764 ntTSL 1 (best) BASIC9.63□□□□□ -0.87
Ccdc180J3QNE4 AU023762-203ENSMUST00000209897 2179 ntTSL 1 (best) BASIC9.62□□□□□ -0.87
Ccdc180J3QNE4 Kynu-202ENSMUST00000050511 2778 ntTSL 1 (best) BASIC9.62□□□□□ -0.87
Ccdc180J3QNE4 Olfr224-202ENSMUST00000215322 1940 ntAPPRIS P1 TSL 5 BASIC9.62□□□□□ -0.87
Ccdc180J3QNE4 Sema3a-202ENSMUST00000095012 4085 ntAPPRIS P1 TSL 1 (best) BASIC9.62□□□□□ -0.87
Ccdc180J3QNE4 AC152414.1-201ENSMUST00000218784 2287 ntTSL 5 BASIC9.62□□□□□ -0.87
Ccdc180J3QNE4 9430007A20Rik-201ENSMUST00000030328 1406 ntAPPRIS P1 TSL 1 (best) BASIC9.62□□□□□ -0.87
Ccdc180J3QNE4 Ube2u-201ENSMUST00000092730 1435 ntTSL 1 (best) BASIC9.62□□□□□ -0.87
Ccdc180J3QNE4 Cd180-204ENSMUST00000171267 1787 ntTSL 1 (best) BASIC9.62□□□□□ -0.87
Ccdc180J3QNE4 Cep112it-201ENSMUST00000143781 4813 ntTSL 1 (best) BASIC9.62□□□□□ -0.87
Ccdc180J3QNE4 Gnrh1-201ENSMUST00000111095 486 ntAPPRIS P1 TSL 1 (best) BASIC9.62□□□□□ -0.87
Ccdc180J3QNE4 Gm14756-201ENSMUST00000116395 240 ntBASIC9.62□□□□□ -0.87
Ccdc180J3QNE4 Gm12281-201ENSMUST00000119536 298 ntBASIC9.62□□□□□ -0.87
Ccdc180J3QNE4 Gm16213-201ENSMUST00000160076 639 ntTSL 1 (best) BASIC9.62□□□□□ -0.87
Ccdc180J3QNE4 Rpl9-ps5-201ENSMUST00000174221 571 ntBASIC9.62□□□□□ -0.87
Ccdc180J3QNE4 S100a11-ps-201ENSMUST00000181735 306 ntBASIC9.62□□□□□ -0.87
Ccdc180J3QNE4 Gm27528-201ENSMUST00000183544 205 ntBASIC9.62□□□□□ -0.87
Ccdc180J3QNE4 Gbp2-ps-201ENSMUST00000198870 1269 ntBASIC9.62□□□□□ -0.87
Ccdc180J3QNE4 Gm8999-201ENSMUST00000204951 969 ntBASIC9.62□□□□□ -0.87
Ccdc180J3QNE4 AC121599.1-201ENSMUST00000224276 449 ntBASIC9.62□□□□□ -0.87
Ccdc180J3QNE4 AC154626.1-201ENSMUST00000226070 311 ntBASIC9.62□□□□□ -0.87
Ccdc180J3QNE4 Mir199a-2-201ENSMUST00000093618 110 ntBASIC9.62□□□□□ -0.87
Ccdc180J3QNE4 Olfr403-202ENSMUST00000206114 3444 ntAPPRIS P1 TSL 3 BASIC9.62□□□□□ -0.87
Ccdc180J3QNE4 Dennd2c-202ENSMUST00000172288 4979 ntAPPRIS P2 TSL 1 (best) BASIC9.62□□□□□ -0.87
Ccdc180J3QNE4 Rapgef6-204ENSMUST00000108894 3475 ntTSL 5 BASIC9.62□□□□□ -0.87
Ccdc180J3QNE4 Uba6-201ENSMUST00000039373 6590 ntAPPRIS P2 TSL 1 (best) BASIC9.62□□□□□ -0.87
Ccdc180J3QNE4 Sspo-206ENSMUST00000212740 15408 ntAPPRIS ALT2 TSL 5 BASIC9.62□□□□□ -0.87
Ccdc180J3QNE4 1700019J19Rik-202ENSMUST00000213583 1856 ntTSL 5 BASIC9.62□□□□□ -0.87
Ccdc180J3QNE4 Olfr126-202ENSMUST00000213844 1958 ntAPPRIS P1 TSL 5 BASIC9.62□□□□□ -0.87
Ccdc180J3QNE4 Olfr771-202ENSMUST00000214271 2098 ntAPPRIS P1 TSL 5 BASIC9.62□□□□□ -0.87
Ccdc180J3QNE4 Klri2-201ENSMUST00000050385 3913 ntAPPRIS P1 TSL 1 (best) BASIC9.62□□□□□ -0.87
Ccdc180J3QNE4 Vmn1r5-202ENSMUST00000226130 3393 ntAPPRIS P1 BASIC9.62□□□□□ -0.87
Ccdc180J3QNE4 Olfr338-201ENSMUST00000072114 5780 ntAPPRIS P1 TSL 3 BASIC9.61□□□□□ -0.87
Ccdc180J3QNE4 Gm43611-201ENSMUST00000196656 4352 ntBASIC9.61□□□□□ -0.87
Ccdc180J3QNE4 Igkv6-17-201ENSMUST00000103391 377 ntAPPRIS P1 BASIC9.61□□□□□ -0.87
Ccdc180J3QNE4 Trav2-201ENSMUST00000103568 325 ntAPPRIS ALT2 BASIC9.61□□□□□ -0.87
Ccdc180J3QNE4 4930444P10Rik-201ENSMUST00000115367 868 ntAPPRIS ALT2 TSL 5 BASIC9.61□□□□□ -0.87
Ccdc180J3QNE4 Gm13733-201ENSMUST00000117290 535 ntBASIC9.61□□□□□ -0.87
Ccdc180J3QNE4 Gm12988-201ENSMUST00000119054 478 ntBASIC9.61□□□□□ -0.87
Ccdc180J3QNE4 Gm14046-201ENSMUST00000119389 509 ntBASIC9.61□□□□□ -0.87
Ccdc180J3QNE4 Gm12813-201ENSMUST00000119615 902 ntBASIC9.61□□□□□ -0.87
Ccdc180J3QNE4 Gm15828-201ENSMUST00000119911 522 ntBASIC9.61□□□□□ -0.87
Ccdc180J3QNE4 Gm16254-201ENSMUST00000131528 730 ntBASIC9.61□□□□□ -0.87
Ccdc180J3QNE4 Gm23354-201ENSMUST00000158426 104 ntBASIC9.61□□□□□ -0.87
Ccdc180J3QNE4 Obox3-ps8-201ENSMUST00000177182 960 ntBASIC9.61□□□□□ -0.87
Ccdc180J3QNE4 Vmn2r-ps23-201ENSMUST00000178719 571 ntBASIC9.61□□□□□ -0.87
Ccdc180J3QNE4 2310043L19Rik-201ENSMUST00000189507 698 ntTSL 1 (best) BASIC9.61□□□□□ -0.87
Ccdc180J3QNE4 Ly6e-215ENSMUST00000191436 1122 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
Ccdc180J3QNE4 CT954323.2-201ENSMUST00000222056 213 ntBASIC9.61□□□□□ -0.87
Ccdc180J3QNE4 Gm10061-201ENSMUST00000073111 465 ntAPPRIS P1 BASIC9.61□□□□□ -0.87
Ccdc180J3QNE4 Gm23796-201ENSMUST00000084011 160 ntBASIC9.61□□□□□ -0.87
Ccdc180J3QNE4 AC156569.1-201ENSMUST00000222020 3841 ntBASIC9.61□□□□□ -0.87
Retrieved 100 of 76,532 protein–RNA pairs in 87.5 ms